RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 HAS1Q92839 578 aa17.55■□□□□ 0.4
LINC01220-201ENST00000558575 C16orf70Q9BSU1 422 aa17.55■□□□□ 0.4
LINC01220-201ENST00000558575 KCNMB3Q9NPA1 279 aa17.55■□□□□ 0.4
LINC01220-201ENST00000558575 POLR3EQ9NVU0 708 aa17.55■□□□□ 0.4
LINC01220-201ENST00000558575 ATG2AQ2TAZ0 1938 aa17.55■□□□□ 0.4
LINC01220-201ENST00000558575 KPNA6O60684 536 aa17.54■□□□□ 0.4
LINC01220-201ENST00000558575 PSMD10O75832 226 aa17.54■□□□□ 0.4
LINC01220-201ENST00000558575 GCFC2P16383 781 aaKnown RBP17.54■□□□□ 0.4
LINC01220-201ENST00000558575 ATP2B1P20020 1258 aa17.54■□□□□ 0.4
LINC01220-201ENST00000558575 DGKDQ16760 1214 aa17.54■□□□□ 0.4
LINC01220-201ENST00000558575 MCTP1Q6DN14 999 aa17.54■□□□□ 0.4
LINC01220-201ENST00000558575 PPP1R13LQ8WUF5 828 aa17.54■□□□□ 0.4
LINC01220-201ENST00000558575 PCYT2Q99447 389 aa17.54■□□□□ 0.4
LINC01220-201ENST00000558575 SDF4Q9BRK5 362 aa17.54■□□□□ 0.4
LINC01220-201ENST00000558575 MTG1Q9BT17 334 aaPredicted RBP17.54■□□□□ 0.4
LINC01220-201ENST00000558575 JPH1Q9HDC5 661 aaPredicted RBP17.54■□□□□ 0.4
LINC01220-201ENST00000558575 SLC9A2Q9UBY0 812 aa17.54■□□□□ 0.4
LINC01220-201ENST00000558575 MTMR6Q9Y217 621 aa17.54■□□□□ 0.4
LINC01220-201ENST00000558575 SCN10AQ9Y5Y9 1956 aa17.53■□□□□ 0.4
LINC01220-201ENST00000558575 DDX39AO00148 427 aaKnown RBP17.53■□□□□ 0.4
LINC01220-201ENST00000558575 CABYRO75952 493 aa17.53■□□□□ 0.4
LINC01220-201ENST00000558575 ATG7O95352 703 aa17.53■□□□□ 0.4
LINC01220-201ENST00000558575 ACTR2P61160 394 aa17.53■□□□□ 0.4
LINC01220-201ENST00000558575 BRDTQ58F21 947 aaPredicted RBP17.53■□□□□ 0.4
LINC01220-201ENST00000558575 B3GNT9Q6UX72 402 aa17.53■□□□□ 0.4
LINC01220-201ENST00000558575 DEFB128Q7Z7B8 93 aa17.53■□□□□ 0.4
LINC01220-201ENST00000558575 POTEDQ86YR6 584 aa17.53■□□□□ 0.4
LINC01220-201ENST00000558575 SEPT1Q8WYJ6 367 aa17.53■□□□□ 0.4
LINC01220-201ENST00000558575 PHOX2BQ99453 314 aa17.53■□□□□ 0.4
LINC01220-201ENST00000558575 TMEM60Q9H2L4 133 aa17.53■□□□□ 0.4
LINC01220-201ENST00000558575 TBC1D22BQ9NU19 505 aa17.53■□□□□ 0.4
LINC01220-201ENST00000558575 CFAP54Q96N23 3096 aa17.53■□□□□ 0.4
LINC01220-201ENST00000558575 HAS3O00219 553 aa17.52■□□□□ 0.4
LINC01220-201ENST00000558575 LGALS2P05162 132 aa17.52■□□□□ 0.4
LINC01220-201ENST00000558575 ZNF286BP0CG31 522 aa17.52■□□□□ 0.4
LINC01220-201ENST00000558575 IL9P15248 144 aa17.52■□□□□ 0.4
LINC01220-201ENST00000558575 PDCP20941 246 aa17.52■□□□□ 0.4
LINC01220-201ENST00000558575 NBR1Q14596 966 aa17.52■□□□□ 0.4
LINC01220-201ENST00000558575 ZNF174Q15697 407 aa17.52■□□□□ 0.4
LINC01220-201ENST00000558575 ABHD15Q6UXT9 468 aa17.52■□□□□ 0.4
LINC01220-201ENST00000558575 C4orf32Q8N8J7 132 aa17.52■□□□□ 0.4
LINC01220-201ENST00000558575 MTMR9Q96QG7 549 aa17.52■□□□□ 0.4
LINC01220-201ENST00000558575 SLC9A7Q96T83 725 aa17.52■□□□□ 0.4
LINC01220-201ENST00000558575 RIT2Q99578 217 aa17.52■□□□□ 0.4
LINC01220-201ENST00000558575 DOCK5Q9H7D0 1870 aa17.52■□□□□ 0.39
LINC01220-201ENST00000558575 IGKV6D-21A0A0A0MT36 114 aa17.51■□□□□ 0.39
LINC01220-201ENST00000558575 VPS37CA5D8V6 355 aaPredicted RBP17.51■□□□□ 0.39
LINC01220-201ENST00000558575 NOP56O00567 594 aaKnown RBP17.51■□□□□ 0.39
LINC01220-201ENST00000558575 TECTAO75443 2155 aa17.51■□□□□ 0.39
LINC01220-201ENST00000558575 LGR5O75473 907 aa17.51■□□□□ 0.39
LINC01220-201ENST00000558575 F2P00734 622 aa17.51■□□□□ 0.39
LINC01220-201ENST00000558575 TCF7P36402 384 aaPredicted RBP17.51■□□□□ 0.39
LINC01220-201ENST00000558575 TRAPPC10P48553 1259 aa17.51■□□□□ 0.39
LINC01220-201ENST00000558575 GNL2Q13823 731 aaKnown RBP17.51■□□□□ 0.39
LINC01220-201ENST00000558575 NBPF20Q3BBV1 942 aa17.51■□□□□ 0.39
LINC01220-201ENST00000558575 UTP14CQ5TAP6 766 aaKnown RBP17.51■□□□□ 0.39
LINC01220-201ENST00000558575 FERMT3Q86UX7 667 aa17.51■□□□□ 0.39
LINC01220-201ENST00000558575 TRIM50Q86XT4 487 aa17.51■□□□□ 0.39
LINC01220-201ENST00000558575 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.51■□□□□ 0.39
LINC01220-201ENST00000558575 GDPD5Q8WTR4 605 aa17.51■□□□□ 0.39
LINC01220-201ENST00000558575 NAP1L4Q99733 375 aaKnown RBP17.51■□□□□ 0.39
LINC01220-201ENST00000558575 KCNH6Q9H252 994 aa17.51■□□□□ 0.39
LINC01220-201ENST00000558575 UNC45AQ9H3U1 944 aa17.51■□□□□ 0.39
LINC01220-201ENST00000558575 UBE2ZQ9H832 354 aaPredicted RBP17.51■□□□□ 0.39
LINC01220-201ENST00000558575 PCDHB6Q9Y5E3 794 aa17.51■□□□□ 0.39
LINC01220-201ENST00000558575 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.5■□□□□ 0.39
LINC01220-201ENST00000558575 TBX3O15119 743 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 STX6O43752 255 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 PFKMP08237 780 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 ALADP13716 330 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 SSTR3P32745 418 aaPredicted RBP17.5■□□□□ 0.39
LINC01220-201ENST00000558575 MCM7P33993 719 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 PSEN2P49810 448 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 RESTQ13127 1097 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 CSPP1Q1MSJ5 1256 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 TTC38Q5R3I4 469 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 LRCH2Q5VUJ6 765 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 HERC6Q8IVU3 1022 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 FAM20AQ96MK3 541 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 VAV3Q9UKW4 847 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 NLRC5Q86WI3 1866 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 KMT2EQ8IZD2 1858 aa17.5■□□□□ 0.39
LINC01220-201ENST00000558575 LCHNA4D1U4 455 aa17.49■□□□□ 0.39
LINC01220-201ENST00000558575 H3BRB1 525 aa17.49■□□□□ 0.39
LINC01220-201ENST00000558575 GAS7O60861 476 aa17.49■□□□□ 0.39
LINC01220-201ENST00000558575 HSP90AA1P07900 732 aaKnown RBP17.49■□□□□ 0.39
LINC01220-201ENST00000558575 CYP2C9P11712 490 aa17.49■□□□□ 0.39
LINC01220-201ENST00000558575 HIC1Q14526 733 aa17.49■□□□□ 0.39
LINC01220-201ENST00000558575 LEXMQ3ZCV2 418 aa17.49■□□□□ 0.39
LINC01220-201ENST00000558575 ZNF746Q6NUN9 644 aaPredicted RBP17.49■□□□□ 0.39
LINC01220-201ENST00000558575 TEKT3Q9BXF9 490 aa17.49■□□□□ 0.39
LINC01220-201ENST00000558575 RNPEPQ9H4A4 650 aa17.49■□□□□ 0.39
LINC01220-201ENST00000558575 TUT1Q9H6E5 874 aaKnown RBP17.49■□□□□ 0.39
LINC01220-201ENST00000558575 TRMT13Q9NUP7 481 aaKnown RBP17.49■□□□□ 0.39
LINC01220-201ENST00000558575 C5orf42Q9H799 3197 aa17.49■□□□□ 0.39
LINC01220-201ENST00000558575 EML1O00423 815 aa17.48■□□□□ 0.39
LINC01220-201ENST00000558575 SUPT20HL2P0C7V6 817 aa17.48■□□□□ 0.39
LINC01220-201ENST00000558575 KRT76Q01546 638 aa17.48■□□□□ 0.39
LINC01220-201ENST00000558575 SPIRE1Q08AE8 756 aa17.48■□□□□ 0.39
LINC01220-201ENST00000558575 PKP1Q13835 747 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms