RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 NUB1Q9Y5A7 615 aa4.13□□□□□ -1.75
HERC1-203ENST00000558532 ROCK2O75116 1388 aaKnown RBP4.13□□□□□ -1.75
HERC1-203ENST00000558532 CLASP1Q7Z460 1538 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 KCNK3O14649 394 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 PPP1R12AO14974 1030 aaPredicted RBP4.12□□□□□ -1.75
HERC1-203ENST00000558532 NOBOXO60393 691 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 DNAJC8O75937 253 aaPredicted RBP4.12□□□□□ -1.75
HERC1-203ENST00000558532 COL6A1P12109 1028 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 PTPN1P18031 435 aaKnown RBP4.12□□□□□ -1.75
HERC1-203ENST00000558532 KRT15P19012 456 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 MLLT6P55198 1093 aaPredicted RBP4.12□□□□□ -1.75
HERC1-203ENST00000558532 RRP1P56182 461 aaKnown RBP4.12□□□□□ -1.75
HERC1-203ENST00000558532 ST5P78524 1137 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 SEC23AQ15436 765 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 CRY1Q16526 586 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 FNDC3BQ53EP0 1204 aaKnown RBP4.12□□□□□ -1.75
HERC1-203ENST00000558532 TM4SF20Q53R12 229 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 FAM47CQ5HY64 1035 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 PHF19Q5T6S3 580 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 NT5DC1Q5TFE4 455 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 VASNQ6EMK4 673 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 HHIPL2Q6UWX4 724 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 TTLL7Q6ZT98 887 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 OVCH1Q7RTY7 1134 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 JAZF1Q86VZ6 243 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 FRAT1Q92837 279 aaPredicted RBP4.12□□□□□ -1.75
HERC1-203ENST00000558532 ADAM7Q9H2U9 754 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 DLL4Q9NR61 685 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 RTEL1Q9NZ71 1219 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 KDM6BO15054 1643 aa4.12□□□□□ -1.75
HERC1-203ENST00000558532 BRD4O60885 1362 aaPredicted RBP4.12□□□□□ -1.75
HERC1-203ENST00000558532 ZNF839A8K0R7 811 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 GSTA4O15217 222 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 ASMTLO95671 621 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 C4BPAP04003 597 aaKnown RBP4.11□□□□□ -1.75
HERC1-203ENST00000558532 MECP2P51608 486 aaKnown RBP4.11□□□□□ -1.75
HERC1-203ENST00000558532 DBPQ10586 325 aaPredicted RBP4.11□□□□□ -1.75
HERC1-203ENST00000558532 ZNF460Q14592 562 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 SKIDA1Q1XH10 827 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 FAM26FQ5R3K3 315 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 BTBD8Q5XKL5 378 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 ZDHHC14Q8IZN3 488 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 NLGN4XQ8N0W4 816 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 CLIC6Q96NY7 704 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 MRPL42Q9Y6G3 142 aaKnown RBP4.11□□□□□ -1.75
HERC1-203ENST00000558532 ATP23Q9Y6H3 246 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 KIF7Q2M1P5 1343 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 ZMYM3Q14202 1370 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 ANKRD30BQ9BXX2 1392 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 BLMP54132 1417 aaPredicted RBP4.11□□□□□ -1.75
HERC1-203ENST00000558532 UHRF1BP1Q6BDS2 1440 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 RALGAPBQ86X10 1494 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 NLRP1Q9C000 1473 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 ARHGEF12Q9NZN5 1544 aa4.11□□□□□ -1.75
HERC1-203ENST00000558532 ZNF608Q9ULD9 1512 aaPredicted RBP4.11□□□□□ -1.75
HERC1-203ENST00000558532 DDX3XO00571 662 aaKnown RBP eCLIP4.1□□□□□ -1.754e-9■□□□□ 9.5
HERC1-203ENST00000558532 CLASP2O75122 1294 aaKnown RBP4.1□□□□□ -1.75
HERC1-203ENST00000558532 GLRX3O76003 335 aaKnown RBP4.1□□□□□ -1.75
HERC1-203ENST00000558532 IL18BPO95998 194 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 SDSP20132 328 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 GJA4P35212 333 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 PFKPQ01813 784 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 TKFCQ3LXA3 575 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 RGL3Q3MIN7 710 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 TMEM177Q53S58 311 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 CPZQ66K79 652 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 MCTP2Q6DN12 878 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 ZCCHC8Q6NZY4 707 aaKnown RBP4.1□□□□□ -1.75
HERC1-203ENST00000558532 LILRA6Q6PI73 481 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 FRMD5Q7Z6J6 570 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 IGSF22Q8N9C0 903 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 TXNDC5Q8NBS9 432 aaKnown RBP4.1□□□□□ -1.75
HERC1-203ENST00000558532 PNISRQ8TF01 805 aaKnown RBP4.1□□□□□ -1.75
HERC1-203ENST00000558532 WRNIP1Q96S55 665 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 KCND1Q9NSA2 647 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 RIC8BQ9NVN3 520 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 CROTQ9UKG9 612 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 LAS1LQ9Y4W2 734 aaKnown RBP4.1□□□□□ -1.75
HERC1-203ENST00000558532 DUSP10Q9Y6W6 482 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 ROCK1Q13464 1354 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 SCAPERQ9BY12 1400 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 LAMC1P11047 1609 aa4.1□□□□□ -1.75
HERC1-203ENST00000558532 DNMT1P26358 1616 aaKnown RBP4.1□□□□□ -1.75
HERC1-203ENST00000558532 FAM83GA6ND36 823 aa4.09□□□□□ -1.75
HERC1-203ENST00000558532 PRICKLE3O43900 615 aaPredicted RBP4.09□□□□□ -1.75
HERC1-203ENST00000558532 RFPL3O75679 317 aa4.09□□□□□ -1.75
HERC1-203ENST00000558532 KLHL18O94889 574 aa4.09□□□□□ -1.75
HERC1-203ENST00000558532 NPTXRO95502 500 aa4.09□□□□□ -1.75
HERC1-203ENST00000558532 KNG1P01042 644 aa4.09□□□□□ -1.75
HERC1-203ENST00000558532 ENO2P09104 434 aaPredicted RBP4.09□□□□□ -1.75
HERC1-203ENST00000558532 AOAHP28039 575 aa4.09□□□□□ -1.75
HERC1-203ENST00000558532 IL13P35225 146 aa4.09□□□□□ -1.75
HERC1-203ENST00000558532 IGFALSP35858 605 aa4.09□□□□□ -1.75
HERC1-203ENST00000558532 RANGAP1P46060 587 aaPredicted RBP4.09□□□□□ -1.75
HERC1-203ENST00000558532 CTSWP56202 376 aa4.09□□□□□ -1.75
HERC1-203ENST00000558532 GJA9P57773 515 aa4.09□□□□□ -1.75
HERC1-203ENST00000558532 PABPC4Q13310 644 aaKnown RBP eCLIP4.09□□□□□ -1.75
HERC1-203ENST00000558532 NFIXQ14938 502 aa4.09□□□□□ -1.75
HERC1-203ENST00000558532 PRAMEF18Q5VWM3 479 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms