RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 BBXQ8WY36 941 aaPredicted RBP14.05□□□□□ -0.16
LRRC28-206ENST00000558471 ZBTB10Q96DT7 871 aa14.05□□□□□ -0.16
LRRC28-206ENST00000558471 PRO3102Q9H379 93 aa14.05□□□□□ -0.16
LRRC28-206ENST00000558471 COLQQ9Y215 455 aaPredicted RBP14.05□□□□□ -0.16
LRRC28-206ENST00000558471 MBLAC1A4D2B0 266 aaPredicted RBP14.04□□□□□ -0.16
LRRC28-206ENST00000558471 ZBTB42B2RXF5 422 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 STBD1O95210 358 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 P4HBP07237 508 aaKnown RBP14.04□□□□□ -0.16
LRRC28-206ENST00000558471 IQCF3P0C7M6 154 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 CKBP12277 381 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 CSF2RAP15509 400 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 BMP8BP34820 402 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 EPHB4P54760 987 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 PSMC5P62195 406 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 PRKCEQ02156 737 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 RESTQ13127 1097 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 ZNF484Q5JVG2 852 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 RUFY4Q6ZNE9 571 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 TMEM199Q8N511 208 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 RETREG2Q8NC44 543 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 CAGE1Q8TC20 777 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 SCLYQ96I15 445 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 NRBP2Q9NSY0 501 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 RGL1Q9NZL6 768 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 TUBE1Q9UJT0 475 aa14.04□□□□□ -0.16
LRRC28-206ENST00000558471 POTEMA6NI47 508 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 SLITRK3O94933 977 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 OATP04181 439 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 KLRC1P26715 233 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 THPOP40225 353 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 QARSP47897 775 aaKnown RBP14.03□□□□□ -0.16
LRRC28-206ENST00000558471 FPGSQ05932 587 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 RBL2Q08999 1139 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 CTTNQ14247 550 aaKnown RBP14.03□□□□□ -0.16
LRRC28-206ENST00000558471 ZNF618Q5T7W0 954 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 FAM173BQ6P4H8 233 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 MTHFD1LQ6UB35 978 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 CCDC155Q8N6L0 562 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 DYDC2Q96IM9 177 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 FAM167AQ96KS9 214 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 HSD17B14Q9BPX1 270 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 EIF2AK1Q9BQI3 630 aaKnown RBP14.03□□□□□ -0.16
LRRC28-206ENST00000558471 UBE2OQ9C0C9 1292 aaKnown RBP14.03□□□□□ -0.16
LRRC28-206ENST00000558471 WRAP73Q9P2S5 460 aaPredicted RBP14.03□□□□□ -0.16
LRRC28-206ENST00000558471 COL1A2P08123 1366 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 TANC1Q9C0D5 1861 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 TET1Q8NFU7 2136 aa14.03□□□□□ -0.16
LRRC28-206ENST00000558471 LOXHD1Q8IVV2 1947 aa14.02□□□□□ -0.16
LRRC28-206ENST00000558471 TMEM150BA6NC51 233 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 DDX11L8A8MPP1 907 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 RBAK-RBAKDNI3L0D1 243 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 LAD1O00515 517 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 ACRP10323 421 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 SELPP16109 830 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 CYP4A11Q02928 519 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 BECN1Q14457 450 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 IL17AQ16552 155 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 XKR3Q5GH77 459 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 TAF2Q6P1X5 1199 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 TRAF7Q6Q0C0 670 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 LRRC8DQ7L1W4 858 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 C16orf59Q7L2K0 433 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 TPH2Q8IWU9 490 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 DNAJB3Q8WWF6 145 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 VWCEQ96DN2 955 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 LXNQ9BS40 222 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 NIFKQ9BYG3 293 aaKnown RBP14.02□□□□□ -0.17
LRRC28-206ENST00000558471 PCDHA2Q9Y5H9 948 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 MYH15Q9Y2K3 1946 aa14.02□□□□□ -0.17
LRRC28-206ENST00000558471 DKC1O60832 514 aaKnown RBP eCLIP14.01□□□□□ -0.17
LRRC28-206ENST00000558471 PRPHP41219 470 aa14.01□□□□□ -0.17
LRRC28-206ENST00000558471 FXR2P51116 673 aaKnown RBP eCLIP14.01□□□□□ -0.17
LRRC28-206ENST00000558471 ATP2C1P98194 919 aaPredicted RBP14.01□□□□□ -0.17
LRRC28-206ENST00000558471 PPIGQ13427 754 aaKnown RBP eCLIP14.01□□□□□ -0.17
LRRC28-206ENST00000558471 PKP1Q13835 747 aa14.01□□□□□ -0.17
LRRC28-206ENST00000558471 PDIA5Q14554 519 aa14.01□□□□□ -0.17
LRRC28-206ENST00000558471 GPNMBQ14956 572 aa14.01□□□□□ -0.17
LRRC28-206ENST00000558471 TARBP2Q15633 366 aaKnown RBP14.01□□□□□ -0.17
LRRC28-206ENST00000558471 TMEM266Q2M3C6 531 aa14.01□□□□□ -0.17
LRRC28-206ENST00000558471 ANO5Q75V66 913 aa14.01□□□□□ -0.17
LRRC28-206ENST00000558471 RPAINQ86UA6 219 aa14.01□□□□□ -0.17
LRRC28-206ENST00000558471 C4orf19Q8IY42 314 aa14.01□□□□□ -0.17
LRRC28-206ENST00000558471 CEP89Q96ST8 783 aa14.01□□□□□ -0.17
LRRC28-206ENST00000558471 SH2D3AQ9BRG2 576 aa14.01□□□□□ -0.17
LRRC28-206ENST00000558471 ZSCAN16Q9H4T2 348 aaPredicted RBP14.01□□□□□ -0.17
LRRC28-206ENST00000558471 ZSWIM4Q9H7M6 989 aa14.01□□□□□ -0.17
LRRC28-206ENST00000558471 IL23AQ9NPF7 189 aa14.01□□□□□ -0.17
LRRC28-206ENST00000558471 SEPT9Q9UHD8 586 aaPredicted RBP14.01□□□□□ -0.17
LRRC28-206ENST00000558471 CEP131Q9UPN4 1083 aa14.01□□□□□ -0.17
LRRC28-206ENST00000558471 SMIM35A0A1B0GVV1 85 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 RSPH10B2B2RC85 870 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 ZBTB39O15060 712 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 C22orf31O95567 290 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 CTSHP09668 335 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 RSPH10BP0C881 870 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 SPATA31C1P0DKV0 1188 aa14□□□□□ -0.17
LRRC28-206ENST00000558471 PDIA4P13667 645 aaKnown RBP14□□□□□ -0.17
LRRC28-206ENST00000558471 SF3A1Q15459 793 aaKnown RBP14□□□□□ -0.17
LRRC28-206ENST00000558471 SHHQ15465 462 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms