RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 SLC9C1Q4G0N8 1177 aa12.88□□□□□ -0.35
RORA-207ENST00000558234 ANKLE1Q8NAG6 615 aa12.88□□□□□ -0.35
RORA-207ENST00000558234 HMX1Q9NP08 348 aaPredicted RBP12.88□□□□□ -0.35
RORA-207ENST00000558234 A0A087WWV3 80 aa12.88□□□□□ -0.35
RORA-207ENST00000558234 ZNF862O60290 1169 aa12.88□□□□□ -0.35
RORA-207ENST00000558234 SLITRK3O94933 977 aa12.88□□□□□ -0.35
RORA-207ENST00000558234 POSTNQ15063 836 aa12.88□□□□□ -0.35
RORA-207ENST00000558234 COBLL1Q53SF7 1204 aa12.88□□□□□ -0.35
RORA-207ENST00000558234 SARM1Q6SZW1 724 aa12.88□□□□□ -0.35
RORA-207ENST00000558234 EEPD1Q7L9B9 569 aa12.88□□□□□ -0.35
RORA-207ENST00000558234 PCDHA5Q9Y5H7 936 aa12.88□□□□□ -0.35
RORA-207ENST00000558234 GOLGA6L4A6NEF3 574 aa12.87□□□□□ -0.35
RORA-207ENST00000558234 CYFIP1Q7L576 1253 aa12.87□□□□□ -0.35
RORA-207ENST00000558234 CCDC60Q8IWA6 550 aaPredicted RBP12.87□□□□□ -0.35
RORA-207ENST00000558234 KCTD17Q8N5Z5 321 aa12.87□□□□□ -0.35
RORA-207ENST00000558234 KCNN1Q92952 543 aa12.87□□□□□ -0.35
RORA-207ENST00000558234 MAN1B1Q9UKM7 699 aa12.87□□□□□ -0.35
RORA-207ENST00000558234 DNM1LO00429 736 aa12.87□□□□□ -0.35
RORA-207ENST00000558234 SFNP31947 248 aa12.87□□□□□ -0.35
RORA-207ENST00000558234 CDK7P50613 346 aa12.87□□□□□ -0.35
RORA-207ENST00000558234 TTC12Q9H892 705 aaPredicted RBP12.87□□□□□ -0.35
RORA-207ENST00000558234 SGPL1O95470 568 aa12.87□□□□□ -0.35
RORA-207ENST00000558234 CUL4BQ13620 913 aa12.87□□□□□ -0.35
RORA-207ENST00000558234 STX1AQ16623 288 aa12.87□□□□□ -0.35
RORA-207ENST00000558234 LRCH2Q5VUJ6 765 aa12.87□□□□□ -0.35
RORA-207ENST00000558234 TEKT3Q9BXF9 490 aa12.87□□□□□ -0.35
RORA-207ENST00000558234 JAK3P52333 1124 aa12.86□□□□□ -0.35
RORA-207ENST00000558234 EPHA7Q15375 998 aa12.86□□□□□ -0.35
RORA-207ENST00000558234 DTHD1Q6ZMT9 781 aa12.86□□□□□ -0.35
RORA-207ENST00000558234 GRAMD1CQ8IYS0 662 aa12.86□□□□□ -0.35
RORA-207ENST00000558234 TRIML1Q8N9V2 468 aa12.86□□□□□ -0.35
RORA-207ENST00000558234 NIFKQ9BYG3 293 aaKnown RBP12.86□□□□□ -0.35
RORA-207ENST00000558234 ZHX1Q9UKY1 873 aaPredicted RBP12.86□□□□□ -0.35
RORA-207ENST00000558234 COL4A6Q14031 1691 aa12.86□□□□□ -0.35
RORA-207ENST00000558234 MED24O75448 989 aa12.86□□□□□ -0.35
RORA-207ENST00000558234 ECM2O94769 699 aaPredicted RBP12.86□□□□□ -0.35
RORA-207ENST00000558234 MARCH8Q5T0T0 291 aa12.86□□□□□ -0.35
RORA-207ENST00000558234 FAM13BQ9NYF5 915 aa12.86□□□□□ -0.35
RORA-207ENST00000558234 RPA1P27694 616 aa12.86□□□□□ -0.35
RORA-207ENST00000558234 NEK9Q8TD19 979 aa12.86□□□□□ -0.35
RORA-207ENST00000558234 TUFT1Q9NNX1 390 aa12.86□□□□□ -0.35
RORA-207ENST00000558234 PDCD11Q14690 1871 aaKnown RBP12.86□□□□□ -0.35
RORA-207ENST00000558234 POTEMA6NI47 508 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 PPFIA4O75335 1185 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 LGALS2P05162 132 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 CT47A1Q5JQC4 288 aaPredicted RBP12.85□□□□□ -0.35
RORA-207ENST00000558234 AFG1LQ8WV93 481 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 DNAJC25Q9H1X3 360 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 IGKV6-21A0A0C4DH24 114 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 FSCN1Q16658 493 aaKnown RBP12.85□□□□□ -0.35
RORA-207ENST00000558234 KANK3Q6NY19 840 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 APTXQ7Z2E3 356 aaKnown RBP12.85□□□□□ -0.35
RORA-207ENST00000558234 C4orf19Q8IY42 314 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 CUEDC2Q9H467 287 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 XPNPEP3Q9NQH7 507 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.85□□□□□ -0.35
RORA-207ENST00000558234 MBLAC1A4D2B0 266 aaPredicted RBP12.85□□□□□ -0.35
RORA-207ENST00000558234 MOXD2PA6NHM9 499 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 WDR64B1ANS9 1081 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 PPP1R3GB7ZBB8 358 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 IKBKBO14920 756 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 MYL1P05976 194 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 CD44P16070 742 aaKnown RBP12.85□□□□□ -0.35
RORA-207ENST00000558234 CDC25AP30304 524 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 CATSPER3Q86XQ3 398 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 OR6J1Q8NGC5 347 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 C7orf25Q9BPX7 421 aa12.85□□□□□ -0.35
RORA-207ENST00000558234 RBL2Q08999 1139 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 KCNK18Q7Z418 384 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 LUZP1Q86V48 1076 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 EIF2AK1Q9BQI3 630 aaKnown RBP12.84□□□□□ -0.35
RORA-207ENST00000558234 SDF4Q9BRK5 362 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 PYM1Q9BRP8 204 aaKnown RBP12.84□□□□□ -0.35
RORA-207ENST00000558234 MAGEF1Q9HAY2 307 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 COL1A2P08123 1366 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 KPNA6O60684 536 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 RARBP10826 455 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 ZNF18P17022 549 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 TCF7P36402 384 aaPredicted RBP12.84□□□□□ -0.35
RORA-207ENST00000558234 CPT1AP50416 773 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 KARSQ15046 597 aaKnown RBP12.84□□□□□ -0.35
RORA-207ENST00000558234 SEPT1Q8WYJ6 367 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 GSDMAQ96QA5 445 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 PCDHA12Q9UN75 941 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 PCDHA10Q9Y5I2 948 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 FRMD3A2A2Y4 597 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 GAS7O60861 476 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 ATP2B1P20020 1258 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 KCNB1Q14721 858 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 CNNM3Q8NE01 707 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 U2AF1L4Q8WU68 220 aaKnown RBP12.84□□□□□ -0.35
RORA-207ENST00000558234 SPATA33Q96N06 139 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 DBR1Q9UK59 544 aaKnown RBP12.84□□□□□ -0.35
RORA-207ENST00000558234 RALGAPA2Q2PPJ7 1873 aa12.84□□□□□ -0.35
RORA-207ENST00000558234 SLC26A2P50443 739 aa12.83□□□□□ -0.35
RORA-207ENST00000558234 PLCB4Q15147 1175 aa12.83□□□□□ -0.35
RORA-207ENST00000558234 ANO5Q75V66 913 aa12.83□□□□□ -0.35
RORA-207ENST00000558234 PCDHA2Q9Y5H9 948 aa12.83□□□□□ -0.35
RORA-207ENST00000558234 EVPLQ92817 2033 aa12.83□□□□□ -0.35
RORA-207ENST00000558234 CD4P01730 458 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms