RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 POLR3CQ9BUI4 534 aaPredicted RBP17.13■□□□□ 0.33
NEDD1-213ENST00000557644 SCN10AQ9Y5Y9 1956 aa17.12■□□□□ 0.33
NEDD1-213ENST00000557644 UBA7P41226 1012 aa17.12■□□□□ 0.33
NEDD1-213ENST00000557644 ITGA7Q13683 1181 aa17.12■□□□□ 0.33
NEDD1-213ENST00000557644 UBE2Q1Q7Z7E8 422 aa17.12■□□□□ 0.33
NEDD1-213ENST00000557644 CABP7Q86V35 215 aa17.12■□□□□ 0.33
NEDD1-213ENST00000557644 KATNAL1Q9BW62 490 aa17.12■□□□□ 0.33
NEDD1-213ENST00000557644 C11orf49Q9H6J7 331 aa17.12■□□□□ 0.33
NEDD1-213ENST00000557644 ZSWIM4Q9H7M6 989 aa17.12■□□□□ 0.33
NEDD1-213ENST00000557644 TRPC6Q9Y210 931 aa17.12■□□□□ 0.33
NEDD1-213ENST00000557644 HIC1Q14526 733 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 KARSQ15046 597 aaKnown RBP17.11■□□□□ 0.33
NEDD1-213ENST00000557644 NEK9Q8TD19 979 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 PIGOQ8TEQ8 1089 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 ATP8B4Q8TF62 1192 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 TUFT1Q9NNX1 390 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 HDAC6Q9UBN7 1215 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 KIAA1024Q9UPX6 916 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 OATP04181 439 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 SMIM10L2AP0DMW4 78 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 SMIM10L2BP0DMW5 78 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 SLC26A2P50443 739 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 FAM47CQ5HY64 1035 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 ANO5Q75V66 913 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 NECAB2Q7Z6G3 386 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 C4orf19Q8IY42 314 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 ZNF579Q8NAF0 562 aaKnown RBP17.11■□□□□ 0.33
NEDD1-213ENST00000557644 ZBTB10Q96DT7 871 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 PNMA5Q96PV4 448 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 PANK2Q9BZ23 570 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 DDX19AQ9NUU7 478 aaKnown RBP17.11■□□□□ 0.33
NEDD1-213ENST00000557644 WDR81Q562E7 1941 aa17.11■□□□□ 0.33
NEDD1-213ENST00000557644 GRB10Q13322 594 aa17.1■□□□□ 0.33
NEDD1-213ENST00000557644 PLA2G4FQ68DD2 849 aa17.1■□□□□ 0.33
NEDD1-213ENST00000557644 KCNK18Q7Z418 384 aa17.1■□□□□ 0.33
NEDD1-213ENST00000557644 LRRC15Q8TF66 581 aa17.1■□□□□ 0.33
NEDD1-213ENST00000557644 TRAPPC12Q8WVT3 735 aa17.1■□□□□ 0.33
NEDD1-213ENST00000557644 SETD4Q9NVD3 440 aa17.1■□□□□ 0.33
NEDD1-213ENST00000557644 A0A087X0B3 334 aa17.1■□□□□ 0.33
NEDD1-213ENST00000557644 DDX11L8A8MPP1 907 aa17.1■□□□□ 0.33
NEDD1-213ENST00000557644 INSRRP14616 1297 aa17.1■□□□□ 0.33
NEDD1-213ENST00000557644 YWHABP31946 246 aaKnown RBP17.1■□□□□ 0.33
NEDD1-213ENST00000557644 ZNF200P98182 395 aaPredicted RBP17.1■□□□□ 0.33
NEDD1-213ENST00000557644 ADALQ6DHV7 355 aa17.1■□□□□ 0.33
NEDD1-213ENST00000557644 C7orf31Q8N865 590 aa17.1■□□□□ 0.33
NEDD1-213ENST00000557644 CCSER1Q9C0I3 900 aa17.1■□□□□ 0.33
NEDD1-213ENST00000557644 SEPT9Q9UHD8 586 aaPredicted RBP17.1■□□□□ 0.33
NEDD1-213ENST00000557644 MYH9P35579 1960 aaKnown RBP17.1■□□□□ 0.33
NEDD1-213ENST00000557644 A0A0U1RQG5 324 aaPredicted RBP17.09■□□□□ 0.33
NEDD1-213ENST00000557644 ZBTB42B2RXF5 422 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 CAPN2P17655 700 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 NPEPPSP55786 919 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 IGBP1P78318 339 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 XKR3Q5GH77 459 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 SLC39A5Q6ZMH5 540 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 CLEC17AQ6ZS10 378 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 BBXQ8WY36 941 aaPredicted RBP17.09■□□□□ 0.33
NEDD1-213ENST00000557644 LYPLA2O95372 231 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 PPFIA1Q13136 1202 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 HYIQ5T013 277 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 RESP18Q5W5W9 173 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 PDILTQ8N807 584 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 SLC43A3Q8NBI5 491 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 RASSF8Q8NHQ8 419 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 STK24Q9Y6E0 443 aa17.09■□□□□ 0.33
NEDD1-213ENST00000557644 E9PMD0 336 aa17.08■□□□□ 0.33
NEDD1-213ENST00000557644 ARVCFO00192 962 aa17.08■□□□□ 0.33
NEDD1-213ENST00000557644 HBP1O60381 514 aa17.08■□□□□ 0.33
NEDD1-213ENST00000557644 PLCG1P19174 1290 aa17.08■□□□□ 0.33
NEDD1-213ENST00000557644 GRIK4Q16099 956 aa17.08■□□□□ 0.33
NEDD1-213ENST00000557644 GDF6Q6KF10 455 aaPredicted RBP17.08■□□□□ 0.33
NEDD1-213ENST00000557644 NFRKBQ6P4R8 1299 aa17.08■□□□□ 0.33
NEDD1-213ENST00000557644 LMBR1Q8WVP7 490 aa17.08■□□□□ 0.33
NEDD1-213ENST00000557644 FAM167AQ96KS9 214 aa17.08■□□□□ 0.33
NEDD1-213ENST00000557644 NRBP2Q9NSY0 501 aa17.08■□□□□ 0.33
NEDD1-213ENST00000557644 GTF2IRD1Q9UHL9 959 aa17.08■□□□□ 0.33
NEDD1-213ENST00000557644 A0A1B0GVL5 298 aa17.08■□□□□ 0.32
NEDD1-213ENST00000557644 DKC1O60832 514 aaKnown RBP eCLIP17.08■□□□□ 0.32
NEDD1-213ENST00000557644 GADD45BO75293 160 aaPredicted RBP17.08■□□□□ 0.32
NEDD1-213ENST00000557644 CDK7P50613 346 aa17.08■□□□□ 0.32
NEDD1-213ENST00000557644 LRRC26Q2I0M4 334 aa17.08■□□□□ 0.32
NEDD1-213ENST00000557644 MTERF2Q49AM1 385 aa17.08■□□□□ 0.32
NEDD1-213ENST00000557644 TMEM119Q4V9L6 283 aa17.08■□□□□ 0.32
NEDD1-213ENST00000557644 CALML4Q96GE6 196 aa17.08■□□□□ 0.32
NEDD1-213ENST00000557644 CDK5RAP3Q96JB5 506 aa17.08■□□□□ 0.32
NEDD1-213ENST00000557644 TRMT13Q9NUP7 481 aaKnown RBP17.08■□□□□ 0.32
NEDD1-213ENST00000557644 KDM3AQ9Y4C1 1321 aa17.07■□□□□ 0.32
NEDD1-213ENST00000557644 TXLNAP40222 546 aa17.07■□□□□ 0.32
NEDD1-213ENST00000557644 MARCH8Q5T0T0 291 aa17.07■□□□□ 0.32
NEDD1-213ENST00000557644 NACC1Q96RE7 527 aa17.07■□□□□ 0.32
NEDD1-213ENST00000557644 NIFKQ9BYG3 293 aaKnown RBP17.07■□□□□ 0.32
NEDD1-213ENST00000557644 TRPV6Q9H1D0 765 aa17.07■□□□□ 0.32
NEDD1-213ENST00000557644 NRCAMQ92823 1304 aa17.07■□□□□ 0.32
NEDD1-213ENST00000557644 PQBP1O60828 265 aaKnown RBP17.07■□□□□ 0.32
NEDD1-213ENST00000557644 CMA1P23946 247 aa17.07■□□□□ 0.32
NEDD1-213ENST00000557644 TRIM60Q495X7 471 aa17.07■□□□□ 0.32
NEDD1-213ENST00000557644 SESTD1Q86VW0 696 aa17.07■□□□□ 0.32
NEDD1-213ENST00000557644 CEP170P1Q96L14 293 aa17.07■□□□□ 0.32
NEDD1-213ENST00000557644 CTAGE1Q96RT6 745 aa17.07■□□□□ 0.32
NEDD1-213ENST00000557644 CEP89Q96ST8 783 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms