RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 GPC1P35052 558 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 KCNJ6P48051 423 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 MRE11P49959 708 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 NHLH1Q02575 133 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 PDE4BQ07343 736 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 LY6KQ17RY6 165 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 LEXMQ3ZCV2 418 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 CNKSR3Q6P9H4 555 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 SESTD1Q86VW0 696 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 GJD3Q8N144 294 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 AFAP1L1Q8TED9 768 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 DCAF4Q8WV16 495 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 TGS1Q96RS0 853 aaKnown RBP9.33□□□□□ -0.92
RD3L-201ENST00000557640 TMEM47Q9BQJ4 181 aa9.33□□□□□ -0.92
RD3L-201ENST00000557640 NUCKS1Q9H1E3 243 aaKnown RBP9.33□□□□□ -0.92
RD3L-201ENST00000557640 VPS13AQ96RL7 3174 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 DCHS1Q96JQ0 3298 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 ORC4O43929 436 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 ZFYP08048 801 aaPredicted RBP9.32□□□□□ -0.92
RD3L-201ENST00000557640 FGRP09769 529 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 SNHG28P0DPA3 235 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 TXNP10599 105 aaKnown RBP9.32□□□□□ -0.92
RD3L-201ENST00000557640 PTPN11Q06124 597 aaPredicted RBP9.32□□□□□ -0.92
RD3L-201ENST00000557640 PDE4DQ08499 809 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 BFSP2Q13515 415 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 ZNF618Q5T7W0 954 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 RNF207Q6ZRF8 634 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 TBC1D10CQ8IV04 446 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 RETREG2Q8NC44 543 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 CAGE1Q8TC20 777 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 NEK9Q8TD19 979 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 SCFD2Q8WU76 684 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 ZNF287Q9HBT7 754 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 HDAC6Q9UBN7 1215 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 ADD3Q9UEY8 706 aaKnown RBP9.32□□□□□ -0.92
RD3L-201ENST00000557640 GTF2IRD1Q9UHL9 959 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 ANAPC4Q9UJX5 808 aa9.32□□□□□ -0.92
RD3L-201ENST00000557640 NEDD4P46934 1319 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 WDR19Q8NEZ3 1342 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 ZDBF2Q9HCK1 2354 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 LOC102724159A0A0B4J2E5 919 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 HAS3O00219 553 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 OPLAHO14841 1288 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 NKRFO15226 690 aaKnown RBP eCLIP9.31□□□□□ -0.92
RD3L-201ENST00000557640 SORBS3O60504 671 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 RANBP6O60518 1105 aaKnown RBP9.31□□□□□ -0.92
RD3L-201ENST00000557640 F2P00734 622 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 LINC00271P0C7V0 271 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 GOLGA8HP0CJ92 632 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 HTRA4P83105 476 aaPredicted RBP9.31□□□□□ -0.92
RD3L-201ENST00000557640 ZP2Q05996 745 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 ZNF543Q08ER8 600 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 COL19A1Q14993 1142 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 PWP2Q15269 919 aaKnown RBP9.31□□□□□ -0.92
RD3L-201ENST00000557640 LRRFIP1Q32MZ4 808 aaKnown RBP9.31□□□□□ -0.92
RD3L-201ENST00000557640 USH1GQ495M9 461 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 CHST3Q7LGC8 479 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 FBXL18Q96ME1 805 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 RAD9AQ99638 391 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 FSD1Q9BTV5 496 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 DCTPP1Q9H773 170 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 LMCD1Q9NZU5 365 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 NOD1Q9Y239 953 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 BAZ2BQ9UIF8 2168 aaKnown RBP9.31□□□□□ -0.92
RD3L-201ENST00000557640 RAD50Q92878 1312 aa9.31□□□□□ -0.92
RD3L-201ENST00000557640 A0A0D9SFI3 127 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 A0A1W2PRU2 124 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 KIF28PB7ZC32 967 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 LTBRP36941 435 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 TCEAL5Q5H9L2 206 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 SEPT14Q6ZU15 432 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 HFE2Q6ZVN8 426 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 ZNF589Q86UQ0 364 aaPredicted RBP9.3□□□□□ -0.92
RD3L-201ENST00000557640 DNERQ8NFT8 737 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 IL31RAQ8NI17 732 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 SYTL5Q8TDW5 730 aaPredicted RBP9.3□□□□□ -0.92
RD3L-201ENST00000557640 EDARADDQ8WWZ3 215 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 TAAR1Q96RJ0 339 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 UIMC1Q96RL1 719 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 ALG1Q9BT22 464 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 NACAP1Q9BZK3 213 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 TELO2Q9Y4R8 837 aa9.3□□□□□ -0.92
RD3L-201ENST00000557640 CACNA1HO95180 2353 aa9.29□□□□□ -0.92
RD3L-201ENST00000557640 ABHD14A-ACY1A0A1B0GW23 586 aa9.29□□□□□ -0.92
RD3L-201ENST00000557640 ESPNB1AK53 854 aa9.29□□□□□ -0.92
RD3L-201ENST00000557640 C1QTNF9BB2RNN3 333 aa9.29□□□□□ -0.92
RD3L-201ENST00000557640 GH1P01241 217 aa9.29□□□□□ -0.92
RD3L-201ENST00000557640 TOP1P11387 765 aaKnown RBP9.29□□□□□ -0.92
RD3L-201ENST00000557640 HOXD8P13378 290 aaPredicted RBP9.29□□□□□ -0.92
RD3L-201ENST00000557640 AMPD1P23109 780 aa9.29□□□□□ -0.92
RD3L-201ENST00000557640 HAND2P61296 217 aa9.29□□□□□ -0.92
RD3L-201ENST00000557640 DLX2Q07687 328 aaPredicted RBP9.29□□□□□ -0.92
RD3L-201ENST00000557640 EPC2Q52LR7 807 aa9.29□□□□□ -0.92
RD3L-201ENST00000557640 RRP12Q5JTH9 1297 aaKnown RBP9.29□□□□□ -0.92
RD3L-201ENST00000557640 KRTAP1-3Q8IUG1 177 aa9.29□□□□□ -0.92
RD3L-201ENST00000557640 PRSS33Q8NF86 280 aa9.29□□□□□ -0.92
RD3L-201ENST00000557640 DBF4BQ8NFT6 615 aa9.29□□□□□ -0.92
RD3L-201ENST00000557640 MRPL38Q96DV4 380 aaKnown RBP9.29□□□□□ -0.92
RD3L-201ENST00000557640 FAM227BQ96M60 508 aa9.29□□□□□ -0.92
RD3L-201ENST00000557640 UBA5Q9GZZ9 404 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms