RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 MTMR7Q9Y216 660 aa15.48■□□□□ 0.07
TMEM260-215ENST00000557626 LAMA5O15230 3695 aa15.48■□□□□ 0.07
TMEM260-215ENST00000557626 LOXHD1Q8IVV2 1947 aa15.47■□□□□ 0.07
TMEM260-215ENST00000557626 GDF9O60383 454 aa15.47■□□□□ 0.07
TMEM260-215ENST00000557626 LRRN2O75325 713 aa15.47■□□□□ 0.07
TMEM260-215ENST00000557626 SRFP11831 508 aa15.47■□□□□ 0.07
TMEM260-215ENST00000557626 SLC16A2P36021 539 aa15.47■□□□□ 0.07
TMEM260-215ENST00000557626 RBM25P49756 843 aaKnown RBP15.47■□□□□ 0.07
TMEM260-215ENST00000557626 FBXO47Q5MNV8 452 aa15.47■□□□□ 0.07
TMEM260-215ENST00000557626 MYSM1Q5VVJ2 828 aa15.47■□□□□ 0.07
TMEM260-215ENST00000557626 PRR23CQ6ZRP0 262 aa15.47■□□□□ 0.07
TMEM260-215ENST00000557626 GPR152Q8TDT2 470 aa15.47■□□□□ 0.07
TMEM260-215ENST00000557626 NSUN6Q8TEA1 469 aaKnown RBP15.47■□□□□ 0.07
TMEM260-215ENST00000557626 FTHL17Q9BXU8 183 aa15.47■□□□□ 0.07
TMEM260-215ENST00000557626 BCO2Q9BYV7 579 aa15.47■□□□□ 0.07
TMEM260-215ENST00000557626 PNMA2Q9UL42 364 aa15.47■□□□□ 0.07
TMEM260-215ENST00000557626 TBKBP1A7MCY6 615 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 CLASP2O75122 1294 aaKnown RBP15.46■□□□□ 0.07
TMEM260-215ENST00000557626 CD52P31358 61 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 ARHGAP4P98171 946 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 PLCB3Q01970 1234 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
TMEM260-215ENST00000557626 MGAT3Q09327 533 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 LPAL2Q16609 132 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 SYDE2Q5VT97 1194 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 LAIR1Q6GTX8 287 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 RTN4RL1Q86UN2 441 aaPredicted RBP15.46■□□□□ 0.07
TMEM260-215ENST00000557626 AACSQ86V21 672 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 FTSJ3Q8IY81 847 aaKnown RBP15.46■□□□□ 0.07
TMEM260-215ENST00000557626 NEDD1Q8NHV4 660 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 EXOC6Q8TAG9 804 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 RSAD2Q8WXG1 361 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 SEMA4GQ9NTN9 838 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 HCSTQ9UBK5 93 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 DACH1Q9UI36 760 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 MYH7P12883 1935 aa15.46■□□□□ 0.07
TMEM260-215ENST00000557626 CYSRT1A8MQ03 144 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 LGALS2P05162 132 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 MS4A1P11836 297 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 LAG3P18627 525 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 CA8P35219 290 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 ATP8B2P98198 1209 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 SMC1AQ14683 1233 aaKnown RBP15.45■□□□□ 0.06
TMEM260-215ENST00000557626 SOWAHCQ53LP3 525 aaPredicted RBP15.45■□□□□ 0.06
TMEM260-215ENST00000557626 CELF3Q5SZQ8 465 aaKnown RBP15.45■□□□□ 0.06
TMEM260-215ENST00000557626 DCLRE1AQ6PJP8 1040 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 TMC5Q6UXY8 1006 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 PRR23BQ6ZRT6 265 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 RSPH3Q86UC2 560 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 ITPRIPQ8IWB1 547 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 SSH3Q8TE77 659 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 KIF12Q96FN5 646 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 IWS1Q96ST2 819 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.45■□□□□ 0.06
TMEM260-215ENST00000557626 ANKFY1Q9P2R3 1169 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 STX8Q9UNK0 236 aa15.45■□□□□ 0.06
TMEM260-215ENST00000557626 C2orf16Q68DN1 1984 aa15.44■□□□□ 0.06
TMEM260-215ENST00000557626 C2orf71A6NGG8 1288 aa15.44■□□□□ 0.06
TMEM260-215ENST00000557626 GGPS1O95749 300 aa15.44■□□□□ 0.06
TMEM260-215ENST00000557626 RETP07949 1114 aa15.44■□□□□ 0.06
TMEM260-215ENST00000557626 PPP4R3BQ5MIZ7 849 aa15.44■□□□□ 0.06
TMEM260-215ENST00000557626 TTBK2Q6IQ55 1244 aa15.44■□□□□ 0.06
TMEM260-215ENST00000557626 LMBR1Q8WVP7 490 aa15.44■□□□□ 0.06
TMEM260-215ENST00000557626 TAAR1Q96RJ0 339 aa15.44■□□□□ 0.06
TMEM260-215ENST00000557626 AGO3Q9H9G7 860 aaKnown RBP15.44■□□□□ 0.06
TMEM260-215ENST00000557626 ZBTB40Q9NUA8 1239 aa15.44■□□□□ 0.06
TMEM260-215ENST00000557626 TYW1Q9NV66 732 aaKnown RBP15.44■□□□□ 0.06
TMEM260-215ENST00000557626 CCDC171Q6TFL3 1326 aa15.43■□□□□ 0.06
TMEM260-215ENST00000557626 NRCAMQ92823 1304 aa15.43■□□□□ 0.06
TMEM260-215ENST00000557626 EIF3JO75822 258 aaKnown RBP15.43■□□□□ 0.06
TMEM260-215ENST00000557626 ADAM17P78536 824 aa15.43■□□□□ 0.06
TMEM260-215ENST00000557626 CSRP2Q16527 193 aa15.43■□□□□ 0.06
TMEM260-215ENST00000557626 TAF2Q6P1X5 1199 aa15.43■□□□□ 0.06
TMEM260-215ENST00000557626 BTNL9Q6UXG8 535 aa15.43■□□□□ 0.06
TMEM260-215ENST00000557626 SLC44A3Q8N4M1 653 aa15.43■□□□□ 0.06
TMEM260-215ENST00000557626 MRPL43Q8N983 215 aaKnown RBP15.43■□□□□ 0.06
TMEM260-215ENST00000557626 ZCCHC14Q8WYQ9 949 aaKnown RBP15.43■□□□□ 0.06
TMEM260-215ENST00000557626 NELL1Q92832 810 aa15.43■□□□□ 0.06
TMEM260-215ENST00000557626 RMDN3Q96TC7 470 aa15.43■□□□□ 0.06
TMEM260-215ENST00000557626 PCDHB7Q9Y5E2 793 aa15.43■□□□□ 0.06
TMEM260-215ENST00000557626 CHGBP05060 677 aa15.42■□□□□ 0.06
TMEM260-215ENST00000557626 TFAP4Q01664 338 aa15.42■□□□□ 0.06
TMEM260-215ENST00000557626 KRT17Q04695 432 aa15.42■□□□□ 0.06
TMEM260-215ENST00000557626 PTPN14Q15678 1187 aa15.42■□□□□ 0.06
TMEM260-215ENST00000557626 TMEM87AQ8NBN3 555 aa15.42■□□□□ 0.06
TMEM260-215ENST00000557626 RGS22Q8NE09 1264 aa15.42■□□□□ 0.06
TMEM260-215ENST00000557626 FEZF2Q8TBJ5 459 aa15.42■□□□□ 0.06
TMEM260-215ENST00000557626 DCAF4Q8WV16 495 aa15.42■□□□□ 0.06
TMEM260-215ENST00000557626 SHDQ96IW2 340 aa15.42■□□□□ 0.06
TMEM260-215ENST00000557626 NOP58Q9Y2X3 529 aaKnown RBP15.42■□□□□ 0.06
TMEM260-215ENST00000557626 CDY2AQ9Y6F7 541 aa15.42■□□□□ 0.06
TMEM260-215ENST00000557626 WDR19Q8NEZ3 1342 aa15.42■□□□□ 0.06
TMEM260-215ENST00000557626 COL4A3Q01955 1670 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 SPDYE4A6NLX3 237 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 FOXD2O60548 495 aaPredicted RBP15.41■□□□□ 0.06
TMEM260-215ENST00000557626 EPCAMP16422 314 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 EIF2AK2P19525 551 aaKnown RBP15.41■□□□□ 0.06
TMEM260-215ENST00000557626 PPM1AP35813 382 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 UBE3CQ15386 1083 aa15.41■□□□□ 0.06
TMEM260-215ENST00000557626 LETM2Q2VYF4 491 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms