RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 THOC1Q96FV9 657 aaKnown RBP9.43□□□□□ -0.9
SYNE3-205ENST00000557275 PRPSAP2O60256 369 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 METTL23Q86XA0 190 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 TUBGCP4Q9UGJ1 667 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 SEMA3FQ13275 785 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 OSBPL10Q9BXB5 764 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 DCTPP1Q9H773 170 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 IARS2Q9NSE4 1012 aaKnown RBP9.43□□□□□ -0.9
SYNE3-205ENST00000557275 IKBKBO14920 756 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 CFLARO15519 480 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 KRT74Q7RTS7 529 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 CABP7Q86V35 215 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 SNX30Q5VWJ9 437 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 RFX6Q8HWS3 928 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 DDHD1Q8NEL9 900 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.43□□□□□ -0.92e-6■■□□□ 12
SYNE3-205ENST00000557275 MMTAG2Q9BU76 263 aaKnown RBP9.43□□□□□ -0.9
SYNE3-205ENST00000557275 FBXL5Q9UKA1 691 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 F6X3S4 739 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 OSBPL1AQ9BXW6 950 aa9.43□□□□□ -0.9
SYNE3-205ENST00000557275 ARPP21Q9UBL0 812 aaPredicted RBP9.43□□□□□ -0.9
SYNE3-205ENST00000557275 A0A0B4J269 797 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 VCAM1P19320 739 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 MYL7Q01449 175 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 TUBB3Q13509 450 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 TMEM206Q9H813 350 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 STX7O15400 261 aaKnown RBP9.42□□□□□ -0.9
SYNE3-205ENST00000557275 CCT8P50990 548 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 PCYOX1LQ8NBM8 494 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 MLPHQ9BV36 600 aaPredicted RBP9.42□□□□□ -0.9
SYNE3-205ENST00000557275 WWP1Q9H0M0 922 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 PANK4Q9NVE7 773 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 H2AFY2Q9P0M6 372 aaPredicted RBP9.42□□□□□ -0.9
SYNE3-205ENST00000557275 ANGPT2O15123 496 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 ANXA13P27216 316 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 EHHADHQ08426 723 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 KIAA1755Q5JYT7 1200 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 C16orf89Q6UX73 402 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 FOPNLQ96NB1 174 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 CDCA7Q9BWT1 371 aaPredicted RBP9.42□□□□□ -0.9
SYNE3-205ENST00000557275 K7ENM7 598 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 TBC1D12O60347 775 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 TTC23LQ6PF05 361 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 DARS2Q6PI48 645 aaKnown RBP9.42□□□□□ -0.9
SYNE3-205ENST00000557275 EPB41L5Q9HCM4 733 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 KDRP35968 1356 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 RASA4BC9J798 803 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 RASA4O43374 803 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 TGFBR2P37173 567 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 TXKP42681 527 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 CDHR1Q96JP9 859 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 KIF22Q14807 665 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 CYTH2Q99418 400 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 LRRC2Q9BYS8 371 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 PPARGC1AQ9UBK2 798 aaKnown RBP9.42□□□□□ -0.9
SYNE3-205ENST00000557275 KIF1BO60333 1816 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 RGS5O15539 181 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 ZBED1O96006 694 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 DNAJC24Q6P3W2 148 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 KRT73Q86Y46 540 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 FAM45AQ8TCE6 357 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 TM6SF1Q9BZW5 370 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 ZNF197O14709 1029 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 SZRD1Q7Z422 152 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 GLG1Q92896 1179 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 ULK4Q96C45 1275 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 RMND5BQ96G75 393 aaPredicted RBP9.42□□□□□ -0.9
SYNE3-205ENST00000557275 ADNPQ9H2P0 1102 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 AS3MTQ9HBK9 375 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 APPL1Q9UKG1 709 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 TCHHQ07283 1943 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 SP4Q02446 784 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 NCF4Q15080 339 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 DEPDC7Q96QD5 511 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 TUBA8Q9NY65 449 aaPredicted RBP9.42□□□□□ -0.9
SYNE3-205ENST00000557275 HPCAL4Q9UM19 191 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 PCDHA12Q9UN75 941 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 KIF24Q5T7B8 1368 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 MYO1CO00159 1063 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 ABCB1P08183 1280 aaPredicted RBP9.42□□□□□ -0.9
SYNE3-205ENST00000557275 RASSF3Q86WH2 238 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 FAM9CQ8IZT9 166 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 FBXO18Q8NFZ0 1043 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 ATP8B4Q8TF62 1192 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 BTN2A2Q8WVV5 523 aa9.42□□□□□ -0.9
SYNE3-205ENST00000557275 SF3B1O75533 1304 aaKnown RBP eCLIP9.42□□□□□ -0.9
SYNE3-205ENST00000557275 CTTNBP2Q8WZ74 1663 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 PARP9Q8IXQ6 854 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 BICC1Q9H694 974 aaKnown RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 USE1Q9NZ43 259 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 SRPRBQ9Y5M8 271 aaKnown RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 KRT14P02533 472 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 CAPN1P07384 714 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 RECQLP46063 649 aaPredicted RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 PLS3P13797 630 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 CHMLP26374 656 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 ARMC3Q5W041 872 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 DIS3L2Q8IYB7 885 aaKnown RBP9.41□□□□□ -0.9
SYNE3-205ENST00000557275 NACC1Q96RE7 527 aa9.41□□□□□ -0.9
SYNE3-205ENST00000557275 CCDC149Q6ZUS6 474 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms