RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 LINC00301Q8NCQ3 95 aa19.63■□□□□ 0.73
PSEN1-218ENST00000556864 SNX29Q8TEQ0 813 aa19.63■□□□□ 0.73
PSEN1-218ENST00000556864 CCDC43Q96MW1 224 aaKnown RBP19.63■□□□□ 0.73
PSEN1-218ENST00000556864 POLR3CQ9BUI4 534 aaPredicted RBP19.63■□□□□ 0.73
PSEN1-218ENST00000556864 NRBP2Q9NSY0 501 aa19.63■□□□□ 0.73
PSEN1-218ENST00000556864 SEPT9Q9UHD8 586 aaPredicted RBP19.63■□□□□ 0.73
PSEN1-218ENST00000556864 SPTLC2O15270 562 aa19.62■□□□□ 0.73
PSEN1-218ENST00000556864 SLC26A4O43511 780 aa19.62■□□□□ 0.73
PSEN1-218ENST00000556864 MUTP22033 750 aa19.62■□□□□ 0.73
PSEN1-218ENST00000556864 HOXC8P31273 242 aa19.62■□□□□ 0.73
PSEN1-218ENST00000556864 CCT6AP40227 531 aaKnown RBP19.62■□□□□ 0.73
PSEN1-218ENST00000556864 TLE2Q04725 743 aa19.62■□□□□ 0.73
PSEN1-218ENST00000556864 ZNF484Q5JVG2 852 aa19.62■□□□□ 0.73
PSEN1-218ENST00000556864 C4orf19Q8IY42 314 aa19.62■□□□□ 0.73
PSEN1-218ENST00000556864 CCDC155Q8N6L0 562 aa19.62■□□□□ 0.73
PSEN1-218ENST00000556864 LMBR1Q8WVP7 490 aa19.62■□□□□ 0.73
PSEN1-218ENST00000556864 RNPEPQ9H4A4 650 aa19.62■□□□□ 0.73
PSEN1-218ENST00000556864 FBXO2Q9UK22 296 aaPredicted RBP19.62■□□□□ 0.73
PSEN1-218ENST00000556864 ZNF862O60290 1169 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 EVI5O60447 810 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 PPP6R2O75170 966 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 LYPLA2O95372 231 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 CLTBP09497 229 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 INSRRP14616 1297 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 RPA1P27694 616 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 MARCKSP29966 332 aaPredicted RBP19.61■□□□□ 0.73
PSEN1-218ENST00000556864 TXLNAP40222 546 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 CTTNQ14247 550 aaKnown RBP19.61■□□□□ 0.73
PSEN1-218ENST00000556864 IL17AQ16552 155 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 PTGISQ16647 500 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 GDF6Q6KF10 455 aaPredicted RBP19.61■□□□□ 0.73
PSEN1-218ENST00000556864 TPH2Q8IWU9 490 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 C7orf61Q8IZ16 206 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 HSD17B14Q9BPX1 270 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 RGL1Q9NZL6 768 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 TFIP11Q9UBB9 837 aaKnown RBP19.61■□□□□ 0.73
PSEN1-218ENST00000556864 TUBE1Q9UJT0 475 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 PPME1Q9Y570 386 aa19.61■□□□□ 0.73
PSEN1-218ENST00000556864 SRPRBQ9Y5M8 271 aaKnown RBP19.61■□□□□ 0.73
PSEN1-218ENST00000556864 B4GALT4O60513 344 aa19.6■□□□□ 0.73
PSEN1-218ENST00000556864 RPLP2P05387 115 aaKnown RBP19.6■□□□□ 0.73
PSEN1-218ENST00000556864 IGBP1P78318 339 aa19.6■□□□□ 0.73
PSEN1-218ENST00000556864 OTUD6AQ7L8S5 288 aa19.6■□□□□ 0.73
PSEN1-218ENST00000556864 PPP1R13LQ8WUF5 828 aa19.6■□□□□ 0.73
PSEN1-218ENST00000556864 DPF3Q92784 378 aa19.6■□□□□ 0.73
PSEN1-218ENST00000556864 CDK5RAP3Q96JB5 506 aa19.6■□□□□ 0.73
PSEN1-218ENST00000556864 SCAND2PQ9GZW5 306 aaPredicted RBP19.6■□□□□ 0.73
PSEN1-218ENST00000556864 TRMT13Q9NUP7 481 aaKnown RBP19.6■□□□□ 0.73
PSEN1-218ENST00000556864 SETD4Q9NVD3 440 aa19.6■□□□□ 0.73
PSEN1-218ENST00000556864 PRKAG2Q9UGJ0 569 aa19.6■□□□□ 0.73
PSEN1-218ENST00000556864 NR2E3Q9Y5X4 410 aa19.6■□□□□ 0.73
PSEN1-218ENST00000556864 DDX11L8A8MPP1 907 aa19.59■□□□□ 0.73
PSEN1-218ENST00000556864 SLITRK3O94933 977 aa19.59■□□□□ 0.73
PSEN1-218ENST00000556864 CD4P01730 458 aa19.59■□□□□ 0.73
PSEN1-218ENST00000556864 ATP4AP20648 1035 aa19.59■□□□□ 0.73
PSEN1-218ENST00000556864 YWHABP31946 246 aaKnown RBP19.59■□□□□ 0.73
PSEN1-218ENST00000556864 UBA7P41226 1012 aa19.59■□□□□ 0.73
PSEN1-218ENST00000556864 PTK7Q13308 1070 aa19.59■□□□□ 0.73
PSEN1-218ENST00000556864 RASSF8Q8NHQ8 419 aa19.59■□□□□ 0.73
PSEN1-218ENST00000556864 SPATA32Q96LK8 384 aa19.59■□□□□ 0.73
PSEN1-218ENST00000556864 JPH2Q9BR39 696 aaPredicted RBP19.59■□□□□ 0.73
PSEN1-218ENST00000556864 NIFKQ9BYG3 293 aaKnown RBP19.59■□□□□ 0.73
PSEN1-218ENST00000556864 NT5C3AQ9H0P0 336 aa19.59■□□□□ 0.73
PSEN1-218ENST00000556864 TRPV6Q9H1D0 765 aa19.59■□□□□ 0.73
PSEN1-218ENST00000556864 BRCA2P51587 3418 aa19.58■□□□□ 0.73
PSEN1-218ENST00000556864 PP2D1A8MPX8 630 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 MED24O75448 989 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 ME1P48163 572 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 MLLT1Q03111 559 aaPredicted RBP19.58■□□□□ 0.72
PSEN1-218ENST00000556864 MTERF2Q49AM1 385 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 TAF2Q6P1X5 1199 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 TRMT1LQ7Z2T5 733 aaKnown RBP19.58■□□□□ 0.72
PSEN1-218ENST00000556864 CABP7Q86V35 215 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 SERINC5Q86VE9 423 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 CATSPER3Q86XQ3 398 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 KCTD17Q8N5Z5 321 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 CALML4Q96GE6 196 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 NACC1Q96RE7 527 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 CSRNP2Q9H175 543 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 PRDM5Q9NQX1 630 aaPredicted RBP19.58■□□□□ 0.72
PSEN1-218ENST00000556864 PDLIM7Q9NR12 457 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 ANKEF1Q9NU02 776 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 TMEM39AQ9NV64 488 aa19.58■□□□□ 0.72
PSEN1-218ENST00000556864 ALPK3Q96L96 1907 aa19.57■□□□□ 0.72
PSEN1-218ENST00000556864 MBLAC1A4D2B0 266 aaPredicted RBP19.57■□□□□ 0.72
PSEN1-218ENST00000556864 MAGEB2O15479 319 aa19.57■□□□□ 0.72
PSEN1-218ENST00000556864 CUTAO60888 179 aa19.57■□□□□ 0.72
PSEN1-218ENST00000556864 SPATA31C1P0DKV0 1188 aa19.57■□□□□ 0.72
PSEN1-218ENST00000556864 FAAP100Q0VG06 881 aa19.57■□□□□ 0.72
PSEN1-218ENST00000556864 BFSP2Q13515 415 aa19.57■□□□□ 0.72
PSEN1-218ENST00000556864 PLA2G4FQ68DD2 849 aa19.57■□□□□ 0.72
PSEN1-218ENST00000556864 POTEGQ6S5H5 508 aa19.57■□□□□ 0.72
PSEN1-218ENST00000556864 EXOC8Q8IYI6 725 aa19.57■□□□□ 0.72
PSEN1-218ENST00000556864 RETREG2Q8NC44 543 aa19.57■□□□□ 0.72
PSEN1-218ENST00000556864 CAGE1Q8TC20 777 aa19.57■□□□□ 0.72
PSEN1-218ENST00000556864 WRAP73Q9P2S5 460 aaPredicted RBP19.57■□□□□ 0.72
PSEN1-218ENST00000556864 TBX21Q9UL17 535 aa19.57■□□□□ 0.72
PSEN1-218ENST00000556864 TREHO43280 583 aa19.56■□□□□ 0.72
PSEN1-218ENST00000556864 CAND2O75155 1236 aa19.56■□□□□ 0.72
PSEN1-218ENST00000556864 XRCC6P12956 609 aaKnown RBP eCLIP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms