RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 Q6ZSN1 163 aa6.08□□□□□ -1.44
PRPF39-210ENST00000556718 OTOP3Q7RTS5 596 aa6.08□□□□□ -1.44
PRPF39-210ENST00000556718 CHFRQ96EP1 664 aa6.08□□□□□ -1.44
PRPF39-210ENST00000556718 TACO1Q9BSH4 297 aaKnown RBP6.08□□□□□ -1.44
PRPF39-210ENST00000556718 PHF20Q9BVI0 1012 aa6.08□□□□□ -1.44
PRPF39-210ENST00000556718 KATNBL1Q9H079 304 aa6.08□□□□□ -1.44
PRPF39-210ENST00000556718 IFT57Q9NWB7 429 aa6.08□□□□□ -1.44
PRPF39-210ENST00000556718 C11orf21Q9P2W6 132 aa6.08□□□□□ -1.44
PRPF39-210ENST00000556718 NOP58Q9Y2X3 529 aaKnown RBP6.08□□□□□ -1.44
PRPF39-210ENST00000556718 NKRFO15226 690 aaKnown RBP eCLIP6.07□□□□□ -1.44
PRPF39-210ENST00000556718 NARSO43776 548 aaKnown RBP6.07□□□□□ -1.44
PRPF39-210ENST00000556718 DIAPH1O60610 1272 aaKnown RBP6.07□□□□□ -1.44
PRPF39-210ENST00000556718 COMTP21964 271 aa6.07□□□□□ -1.44
PRPF39-210ENST00000556718 TGM1P22735 817 aa6.07□□□□□ -1.44
PRPF39-210ENST00000556718 MAP4K2Q12851 820 aa6.07□□□□□ -1.44
PRPF39-210ENST00000556718 NOLC1Q14978 699 aaKnown RBP eCLIP6.07□□□□□ -1.44
PRPF39-210ENST00000556718 LONRF2Q1L5Z9 754 aa6.07□□□□□ -1.44
PRPF39-210ENST00000556718 SPATC1Q76KD6 591 aa6.07□□□□□ -1.44
PRPF39-210ENST00000556718 REXO1L1PQ8IX06 675 aa6.07□□□□□ -1.44
PRPF39-210ENST00000556718 IFNL2Q8IZJ0 200 aa6.07□□□□□ -1.44
PRPF39-210ENST00000556718 EDAQ92838 391 aa6.07□□□□□ -1.44
PRPF39-210ENST00000556718 IPO9Q96P70 1041 aaKnown RBP6.07□□□□□ -1.44
PRPF39-210ENST00000556718 SPATA9Q9BWV2 254 aa6.07□□□□□ -1.44
PRPF39-210ENST00000556718 GPR27Q9NS67 375 aa6.07□□□□□ -1.44
PRPF39-210ENST00000556718 COL4A3BPQ9Y5P4 624 aa6.07□□□□□ -1.44
PRPF39-210ENST00000556718 PTCH2Q9Y6C5 1203 aa6.07□□□□□ -1.44
PRPF39-210ENST00000556718 CCDC163A0A0D9SF12 145 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 ZNF839A8K0R7 811 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 H0Y858 1186 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 DLX3O60479 287 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 ENO2P09104 434 aaPredicted RBP6.06□□□□□ -1.44
PRPF39-210ENST00000556718 GYS2P54840 703 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 ABHD18Q0P651 414 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 SQSTM1Q13501 440 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 USP10Q14694 798 aaKnown RBP6.06□□□□□ -1.44
PRPF39-210ENST00000556718 RNF151Q2KHN1 245 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 SLC10A6Q3KNW5 377 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 USP53Q70EK8 1073 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 KIAA0907Q7Z7F0 614 aaPredicted RBP6.06□□□□□ -1.44
PRPF39-210ENST00000556718 UHMK1Q8TAS1 419 aaKnown RBP6.06□□□□□ -1.44
PRPF39-210ENST00000556718 KCTD13Q8WZ19 329 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 IER2Q9BTL4 223 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 CSRNP2Q9H175 543 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 KANSL2Q9H9L4 492 aa6.06□□□□□ -1.44
PRPF39-210ENST00000556718 A0A1W2PQU0 124 aa6.05□□□□□ -1.44
PRPF39-210ENST00000556718 ACOT7O00154 380 aa6.05□□□□□ -1.44
PRPF39-210ENST00000556718 ASMTLO95671 621 aa6.05□□□□□ -1.44
PRPF39-210ENST00000556718 ACO1P21399 889 aaKnown RBP6.05□□□□□ -1.44
PRPF39-210ENST00000556718 PTH1RQ03431 593 aa6.05□□□□□ -1.44
PRPF39-210ENST00000556718 KCNT2Q6UVM3 1135 aa6.05□□□□□ -1.44
PRPF39-210ENST00000556718 JMYQ8N9B5 988 aa6.05□□□□□ -1.44
PRPF39-210ENST00000556718 SGSM3Q96HU1 749 aa6.05□□□□□ -1.44
PRPF39-210ENST00000556718 GPATCH3Q96I76 525 aa6.05□□□□□ -1.44
PRPF39-210ENST00000556718 KCNJ15Q99712 375 aa6.05□□□□□ -1.44
PRPF39-210ENST00000556718 IKZF4Q9H2S9 585 aa6.05□□□□□ -1.44
PRPF39-210ENST00000556718 PLAAQ9Y263 795 aa6.05□□□□□ -1.44
PRPF39-210ENST00000556718 C1SP09871 688 aa6.04□□□□□ -1.44
PRPF39-210ENST00000556718 LSM12Q3MHD2 195 aaKnown RBP6.04□□□□□ -1.44
PRPF39-210ENST00000556718 HABP4Q5JVS0 413 aaKnown RBP6.04□□□□□ -1.44
PRPF39-210ENST00000556718 ZBTB38Q8NAP3 1195 aaPredicted RBP6.04□□□□□ -1.44
PRPF39-210ENST00000556718 DPYSL5Q9BPU6 564 aa6.04□□□□□ -1.44
PRPF39-210ENST00000556718 CARD11Q9BXL7 1154 aa6.04□□□□□ -1.44
PRPF39-210ENST00000556718 TRIM8Q9BZR9 551 aa6.04□□□□□ -1.44
PRPF39-210ENST00000556718 PDGFDQ9GZP0 370 aaPredicted RBP6.04□□□□□ -1.44
PRPF39-210ENST00000556718 SLC39A2Q9NP94 309 aa6.04□□□□□ -1.44
PRPF39-210ENST00000556718 RAD17O75943 681 aa6.03□□□□□ -1.44
PRPF39-210ENST00000556718 FAM153BP0C7A2 387 aa6.03□□□□□ -1.44
PRPF39-210ENST00000556718 GRK2P25098 689 aa6.03□□□□□ -1.44
PRPF39-210ENST00000556718 GRK3P35626 688 aa6.03□□□□□ -1.44
PRPF39-210ENST00000556718 RRADP55042 308 aa6.03□□□□□ -1.44
PRPF39-210ENST00000556718 RAC3P60763 192 aa6.03□□□□□ -1.44
PRPF39-210ENST00000556718 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.03□□□□□ -1.44
PRPF39-210ENST00000556718 CDC6Q99741 560 aa6.03□□□□□ -1.44
PRPF39-210ENST00000556718 PCDH12Q9NPG4 1184 aa6.03□□□□□ -1.44
PRPF39-210ENST00000556718 OAZ3Q9UMX2 235 aa6.03□□□□□ -1.44
PRPF39-210ENST00000556718 MATN2O00339 956 aa6.02□□□□□ -1.45
PRPF39-210ENST00000556718 GNAT1P11488 350 aa6.02□□□□□ -1.45
PRPF39-210ENST00000556718 CR2P20023 1033 aa6.02□□□□□ -1.45
PRPF39-210ENST00000556718 POLD1P28340 1107 aa6.02□□□□□ -1.45
PRPF39-210ENST00000556718 EPHA5P54756 1037 aa6.02□□□□□ -1.45
PRPF39-210ENST00000556718 DUSP8Q13202 625 aa6.02□□□□□ -1.45
PRPF39-210ENST00000556718 TOP3AQ13472 1001 aaPredicted RBP6.02□□□□□ -1.45
PRPF39-210ENST00000556718 HSP90AA2PQ14568 343 aaPredicted RBP6.02□□□□□ -1.45
PRPF39-210ENST00000556718 NTRK3Q16288 839 aa6.02□□□□□ -1.45
PRPF39-210ENST00000556718 SMN1Q16637 294 aaKnown RBP6.02□□□□□ -1.45
PRPF39-210ENST00000556718 LBX2Q6XYB7 198 aa6.02□□□□□ -1.45
PRPF39-210ENST00000556718 C1orf210Q8IVY1 113 aa6.02□□□□□ -1.45
PRPF39-210ENST00000556718 IL17DQ8TAD2 202 aa6.02□□□□□ -1.45
PRPF39-210ENST00000556718 CEP89Q96ST8 783 aa6.02□□□□□ -1.45
PRPF39-210ENST00000556718 CD244Q9BZW8 370 aa6.02□□□□□ -1.45
PRPF39-210ENST00000556718 DSEQ9UL01 958 aa6.02□□□□□ -1.45
PRPF39-210ENST00000556718 WDR33Q9C0J8 1336 aaKnown RBP6.01□□□□□ -1.45
PRPF39-210ENST00000556718 TRAV20A0A0B4J274 112 aa6.01□□□□□ -1.45
PRPF39-210ENST00000556718 MASP1P48740 699 aa6.01□□□□□ -1.45
PRPF39-210ENST00000556718 INHBEP58166 350 aa6.01□□□□□ -1.45
PRPF39-210ENST00000556718 DPTQ07507 201 aa6.01□□□□□ -1.45
PRPF39-210ENST00000556718 SPIRE1Q08AE8 756 aa6.01□□□□□ -1.45
PRPF39-210ENST00000556718 TBR1Q16650 682 aa6.01□□□□□ -1.45
PRPF39-210ENST00000556718 ZNF568Q3ZCX4 644 aa6.01□□□□□ -1.45
PRPF39-210ENST00000556718 MAMDC4Q6UXC1 1216 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms