RNA–Protein interactions for RNA: ENST00000556507.1

TGFB3-205, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-205ENST00000556507 BBS9Q3SYG4 887 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 LARP1BQ659C4 914 aaKnown RBP4.69□□□□□ -1.66
TGFB3-205ENST00000556507 LMBR1LQ6UX01 489 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 ZPBP2Q6X784 338 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 ATG14Q6ZNE5 492 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 TOM1L2Q6ZVM7 507 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 UBE3BQ7Z3V4 1068 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 ZNF605Q86T29 641 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 CCDC83Q8IWF9 413 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 ZNF654Q8IZM8 581 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 KBTBD3Q8NAB2 608 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 ZSCAN18Q8TBC5 510 aaPredicted RBP4.69□□□□□ -1.66
TGFB3-205ENST00000556507 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.69□□□□□ -1.66
TGFB3-205ENST00000556507 DDX17Q92841 729 aaKnown RBP4.69□□□□□ -1.66
TGFB3-205ENST00000556507 SHISA4Q96DD7 197 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 NEK1Q96PY6 1258 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 TM9SF2Q99805 663 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 DBNLQ9UJU6 430 aaKnown RBP4.69□□□□□ -1.66
TGFB3-205ENST00000556507 TPCN1Q9ULQ1 816 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 PPT2Q9UMR5 302 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 NOL7Q9UMY1 257 aaKnown RBP4.69□□□□□ -1.66
TGFB3-205ENST00000556507 MTMR6Q9Y217 621 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 AK9Q5TCS8 1911 aa4.69□□□□□ -1.66
TGFB3-205ENST00000556507 JCADQ9P266 1359 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 MED23Q9ULK4 1368 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 TCAF2A6NFQ2 919 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 NOTOA8MTQ0 251 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 C9IYK1 514 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 NPIPB6E9PJ23 425 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 ETV2O00321 342 aaPredicted RBP4.68□□□□□ -1.66
TGFB3-205ENST00000556507 NRDCO43847 1150 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 ZNF500O60304 480 aaPredicted RBP4.68□□□□□ -1.66
TGFB3-205ENST00000556507 LARGE1O95461 756 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 CPA1P15085 419 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 CFPP27918 469 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 BMP8BP34820 402 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 PMS1P54277 932 aaKnown RBP4.68□□□□□ -1.66
TGFB3-205ENST00000556507 EVA1CP58658 441 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 KRT85P78386 507 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 TCIRG1Q13488 830 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 BRINP3Q76B58 766 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 ATG9AQ7Z3C6 839 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 NLRX1Q86UT6 975 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 CERS3Q8IU89 383 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 CILP2Q8IUL8 1156 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 C7orf61Q8IZ16 206 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 TAB3Q8N5C8 712 aaPredicted RBP4.68□□□□□ -1.66
TGFB3-205ENST00000556507 NECAB1Q8N987 351 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 RBBP8NLQ8NC74 664 aaPredicted RBP4.68□□□□□ -1.66
TGFB3-205ENST00000556507 KLHDC4Q8TBB5 520 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 HHIPL1Q96JK4 782 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 LLPHQ9BRT6 129 aaKnown RBP4.68□□□□□ -1.66
TGFB3-205ENST00000556507 ISCA1Q9BUE6 129 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 DSCC1Q9BVC3 393 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 SCAND2PQ9GZW5 306 aaPredicted RBP4.68□□□□□ -1.66
TGFB3-205ENST00000556507 PRDM11Q9NQV5 511 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 PRR13Q9NZ81 148 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 CNPY2Q9Y2B0 182 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 PKD1L3Q7Z443 1732 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 ELP1O95163 1332 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 SH3TC1Q8TE82 1336 aa4.68□□□□□ -1.66
TGFB3-205ENST00000556507 VPS37CA5D8V6 355 aaPredicted RBP4.67□□□□□ -1.66
TGFB3-205ENST00000556507 EYA2O00167 538 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 RNF113AO15541 343 aaKnown RBP4.67□□□□□ -1.66
TGFB3-205ENST00000556507 PEX10O60683 326 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 OFD1O75665 1012 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 STARD3NLO95772 234 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 A1BGP04217 495 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 TPM2P07951 284 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 ZFYP08048 801 aaPredicted RBP4.67□□□□□ -1.66
TGFB3-205ENST00000556507 MED14OSP0DP75 135 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 ENDOUP21128 410 aaKnown RBP4.67□□□□□ -1.66
TGFB3-205ENST00000556507 GLDCP23378 1020 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 GUCY2CP25092 1073 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 CTSKP43235 329 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 RTP1P59025 263 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 TIMM10P62072 90 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 PAK2Q13177 524 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 COL9A2Q14055 689 aaPredicted RBP4.67□□□□□ -1.66
TGFB3-205ENST00000556507 TOB2Q14106 344 aaPredicted RBP4.67□□□□□ -1.66
TGFB3-205ENST00000556507 KCNA10Q16322 511 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 CCDC57Q2TAC2 916 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 CCDC158Q5M9N0 1113 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 TDRD10Q5VZ19 366 aaKnown RBP4.67□□□□□ -1.66
TGFB3-205ENST00000556507 ATL3Q6DD88 541 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 UNC5AQ6ZN44 842 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 CCDC81Q6ZN84 652 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 RUFY4Q6ZNE9 571 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 TTLL7Q6ZT98 887 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 ZNF589Q86UQ0 364 aaPredicted RBP4.67□□□□□ -1.66
TGFB3-205ENST00000556507 LRRC56Q8IYG6 542 aaPredicted RBP4.67□□□□□ -1.66
TGFB3-205ENST00000556507 FBXL16Q8N461 479 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 SMARCC1Q92922 1105 aaPredicted RBP4.67□□□□□ -1.66
TGFB3-205ENST00000556507 CHAMP1Q96JM3 812 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 FCRL2Q96LA5 508 aaPredicted RBP4.67□□□□□ -1.66
TGFB3-205ENST00000556507 SPATA32Q96LK8 384 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 NEUROD6Q96NK8 337 aa4.67□□□□□ -1.66
TGFB3-205ENST00000556507 NAP1L5Q96NT1 182 aaPredicted RBP4.67□□□□□ -1.66
TGFB3-205ENST00000556507 CDADC1Q9BWV3 514 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms