RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 PRMT6Q96LA8 375 aaPredicted RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 TRIM9Q9C026 710 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 RIC8AQ9NPQ8 531 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 BLOC1S4Q9NUP1 217 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 PI4KBQ9UBF8 816 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 ZMAT5Q9UDW3 170 aaKnown RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 PCNTO95613 3336 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 POTEMA6NI47 508 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 G3V3G9 751 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 H0Y3Z8 333 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 NKRFO15226 690 aaKnown RBP eCLIP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 ATP6V1G1O75348 118 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 GYPCP04921 128 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 MAGEA9P43362 315 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 FXR2P51116 673 aaKnown RBP eCLIP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 ADCY7P51828 1080 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 GRB10Q13322 594 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 ORC2Q13416 577 aaPredicted RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 NEDD9Q14511 834 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 NAA30Q147X3 362 aaPredicted RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 KIAA0753Q2KHM9 967 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 DCAF8Q5TAQ9 597 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 PPP1R18Q6NYC8 613 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 SRLQ86TD4 932 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 CABP7Q86V35 215 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 CCDC112Q8NEF3 446 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 RASSF8Q8NHQ8 419 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 ZFPM2Q8WW38 1151 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 NELFBQ8WX92 580 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 HAS1Q92839 578 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 ZBTB10Q96DT7 871 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 CCDC17Q96LX7 622 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 NUDT12Q9BQG2 462 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 TDRD3Q9H7E2 651 aaKnown RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 LMCD1Q9NZU5 365 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 RNF225M0QZC1 329 aaPredicted RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 HSPA1AP0DMV8 641 aaKnown RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 HSPA1BP0DMV9 641 aaKnown RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 PYGBP11216 843 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 KCNA3P22001 575 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 SNX16P57768 344 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 NCBP1Q09161 790 aaKnown RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 LAMB3Q13751 1172 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 CERKLQ49MI3 558 aaPredicted RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 CCSAPQ6IQ19 270 aaPredicted RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 LSM14AQ8ND56 463 aaKnown RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 DYDC1Q8WWB3 177 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 CRYGNQ8WXF5 182 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 CNKSR1Q969H4 720 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 GJA10Q969M2 543 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 PNMA5Q96PV4 448 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 NYAP2Q9P242 653 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 LIMA1Q9UHB6 759 aaKnown RBP5.58□□□□□ -1.52
TMEM260-210ENST00000556422 INTUQ9ULD6 942 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 MYO6Q9UM54 1294 aa5.58□□□□□ -1.52
TMEM260-210ENST00000556422 ARHGAP6O43182 974 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 C21orf2O43822 256 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 STX10O60499 249 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 GDF11O95390 407 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 CCDC159P0C7I6 412 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 PECAM1P16284 738 aaPredicted RBP5.57□□□□□ -1.52
TMEM260-210ENST00000556422 CCT6AP40227 531 aaKnown RBP5.57□□□□□ -1.52
TMEM260-210ENST00000556422 TXKP42681 527 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 TSPY1Q01534 308 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 ATP2B2Q01814 1243 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 STK4Q13043 487 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 MTF1Q14872 753 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 ECM1Q16610 540 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 QRICH1Q2TAL8 776 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.57□□□□□ -1.52
TMEM260-210ENST00000556422 TCP11X2Q5H9J9 407 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 TTI2Q6NXR4 508 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 TOGARAM2Q6ZUX3 1019 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 KCNK18Q7Z418 384 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 SPATA21Q7Z572 469 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 KIAA1958Q8N8K9 716 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 B4GALNT2Q8NHY0 566 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 ANKRD7Q92527 254 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 N4BP2L2Q92802 583 aaPredicted RBP5.57□□□□□ -1.52
TMEM260-210ENST00000556422 CDHR1Q96JP9 859 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 OSBPL10Q9BXB5 764 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 MAK16Q9BXY0 300 aaKnown RBP5.57□□□□□ -1.52
TMEM260-210ENST00000556422 A0A1W2PRG0 241 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 RBP3P10745 1247 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 FCER1AP12319 257 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 FECHP22830 423 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 ELF1P32519 619 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 FXR1P51114 621 aaKnown RBP eCLIP5.57□□□□□ -1.52
TMEM260-210ENST00000556422 RBL2Q08999 1139 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 CALCRLQ16602 461 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 GNPTABQ3T906 1256 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 PPP4R3AQ6IN85 833 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 KIAA0895Q8NCT3 520 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 C3orf20Q8ND61 904 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 ZNF280CQ8ND82 737 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 TANGO6Q9C0B7 1094 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 CUEDC2Q9H467 287 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 KANSL2Q9H9L4 492 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 L2HGDHQ9H9P8 463 aa5.57□□□□□ -1.52
TMEM260-210ENST00000556422 ZNF304Q9HCX3 659 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms