RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 LUC7LQ9NQ29 371 aaKnown RBP5.24□□□□□ -1.57
ATXN3-241ENST00000556374 HDAC5Q9UQL6 1122 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 GPR55Q9Y2T6 319 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-241ENST00000556374 FHOD1Q9Y613 1164 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 SLC12A7Q9Y666 1083 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 PLEKHG2Q9H7P9 1386 aa5.24□□□□□ -1.57
ATXN3-241ENST00000556374 RRP9O43818 475 aaKnown RBP5.23□□□□□ -1.57
ATXN3-241ENST00000556374 UBTFL1P0CB47 393 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-241ENST00000556374 PRKCAP17252 672 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 BMP7P18075 431 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 PI3P19957 117 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 SSPNQ14714 243 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 ZSCAN23Q3MJ62 389 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 HS1BP3Q53T59 392 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 HSP90AB4PQ58FF6 505 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 LDHDQ86WU2 507 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 FAM129CQ86XR2 697 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 LINC01356Q8N9X3 169 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 TMEM87AQ8NBN3 555 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 PPP1R9BQ96SB3 815 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 SGPP1Q9BX95 441 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 BABAM1Q9NWV8 329 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 GFOD1Q9NXC2 390 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 PCDHA5Q9Y5H7 936 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 CD2APQ9Y5K6 639 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 LTN1O94822 1766 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 CACNA1FO60840 1977 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 TIAM2Q8IVF5 1701 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 KCPQ6ZWJ8 1503 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 MAP3K19Q56UN5 1328 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 IGSF1Q8N6C5 1336 aa5.23□□□□□ -1.57
ATXN3-241ENST00000556374 WDR33Q9C0J8 1336 aaKnown RBP5.23□□□□□ -1.57
ATXN3-241ENST00000556374 UBR3Q6ZT12 1888 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 KDRP35968 1356 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 SHOXO15266 292 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 EPB41L2O43491 1005 aaKnown RBP5.22□□□□□ -1.57
ATXN3-241ENST00000556374 SMARCA5O60264 1052 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-241ENST00000556374 FKTNO75072 461 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 RAB11FIP3O75154 756 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 CYBBP04839 570 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 SYN1P17600 705 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 FBLN1P23142 703 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 ZNF76P36508 570 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 CDR1P51861 262 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 NEK4P51957 841 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 PDE1AP54750 535 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 OS9Q13438 667 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-241ENST00000556374 TARBP2Q15633 366 aaKnown RBP5.22□□□□□ -1.57
ATXN3-241ENST00000556374 RTP2Q5QGT7 225 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 CNKSR3Q6P9H4 555 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 PAQR3Q6TCH7 311 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 CCDC144CPQ8IYA2 1237 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 TMEFF1Q8IYR6 380 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 C16orf71Q8IYS4 520 aaPredicted RBP5.22□□□□□ -1.57
ATXN3-241ENST00000556374 CNTROBQ8N137 903 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 RGS22Q8NE09 1264 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 NUP43Q8NFH3 380 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 RUFY2Q8WXA3 655 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 DSCC1Q9BVC3 393 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 CDADC1Q9BWV3 514 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 SLC12A9Q9BXP2 914 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 CNOT11Q9UKZ1 510 aaKnown RBP5.22□□□□□ -1.57
ATXN3-241ENST00000556374 DIS3Q9Y2L1 958 aaKnown RBP5.22□□□□□ -1.57
ATXN3-241ENST00000556374 SF3B6Q9Y3B4 125 aaKnown RBP5.22□□□□□ -1.57
ATXN3-241ENST00000556374 ATP6V1DQ9Y5K8 247 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 NCAPD2Q15021 1401 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 SBF1O95248 1867 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 WDR17Q8IZU2 1322 aa5.22□□□□□ -1.57
ATXN3-241ENST00000556374 KDM3BQ7LBC6 1761 aa5.21□□□□□ -1.57
ATXN3-241ENST00000556374 FGF10O15520 208 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-241ENST00000556374 FOXD2O60548 495 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-241ENST00000556374 TRIM13O60858 407 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 LETM1O95202 739 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-241ENST00000556374 TBC1D8O95759 1140 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 ACRP10323 421 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 PFKLP17858 780 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 VAMP1P23763 118 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 GUCY2CP25092 1073 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 MCM5P33992 734 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 POU4F1Q01851 419 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 HSP90AA2PQ14568 343 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-241ENST00000556374 NFIXQ14938 502 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 LDLRAD1Q5T700 205 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 ZC3H14Q6PJT7 736 aaKnown RBP5.21□□□□□ -1.58
ATXN3-241ENST00000556374 LRSAM1Q6UWE0 723 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 TOM1L2Q6ZVM7 507 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 IGDCC3Q8IVU1 814 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 TMEM52Q8NDY8 209 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 UBE2Q2Q8WVN8 375 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 ZNF512BQ96KM6 892 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-241ENST00000556374 MAP7D2Q96T17 732 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 RNF38Q9H0F5 515 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 XYLT2Q9H1B5 865 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 TSPY26PQ9H489 355 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 EPB41L4AQ9HCS5 686 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-241ENST00000556374 DIAPH3Q9NSV4 1193 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 AP5S1Q9NUS5 200 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 TFCP2L1Q9NZI6 479 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 EXOC6BQ9Y2D4 811 aa5.21□□□□□ -1.58
ATXN3-241ENST00000556374 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms