RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 FAM160B1Q5W0V3 765 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 MIS18BP1Q6P0N0 1132 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 TRAF7Q6Q0C0 670 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 CCDC60Q8IWA6 550 aaPredicted RBP13.06□□□□□ -0.32
SLIRP-205ENST00000556310 OXER1Q8TDS5 423 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 SLC5A5Q92911 643 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 TBC1D32Q96NH3 1257 aa13.06□□□□□ -0.32
SLIRP-205ENST00000556310 PTPRSQ13332 1948 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 MICAL3Q7RTP6 2002 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 BACH1O14867 736 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 GAS7O60861 476 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 CXCL10P02778 98 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 MMP1P03956 469 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 ACTN1P12814 892 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 GCFC2P16383 781 aaKnown RBP13.05□□□□□ -0.32
SLIRP-205ENST00000556310 THPOP40225 353 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 HMGN5P82970 282 aaKnown RBP13.05□□□□□ -0.32
SLIRP-205ENST00000556310 DSG2Q14126 1118 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 TRIM29Q14134 588 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 PLCB4Q15147 1175 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 GRIK4Q16099 956 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 ZNF618Q5T7W0 954 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 FAM109BQ6ICB4 259 aaPredicted RBP13.05□□□□□ -0.32
SLIRP-205ENST00000556310 TAF2Q6P1X5 1199 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 PIK3AP1Q6ZUJ8 805 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 OTOP2Q7RTS6 562 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 NEK8Q86SG6 692 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 TNPO1Q92973 898 aaKnown RBP13.05□□□□□ -0.32
SLIRP-205ENST00000556310 UIMC1Q96RL1 719 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 RIT2Q99578 217 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
SLIRP-205ENST00000556310 DDX25Q9UHL0 483 aaKnown RBP13.05□□□□□ -0.32
SLIRP-205ENST00000556310 TUBE1Q9UJT0 475 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 IGSF9BQ9UPX0 1349 aa13.05□□□□□ -0.32
SLIRP-205ENST00000556310 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-205ENST00000556310 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-205ENST00000556310 MBLAC1A4D2B0 266 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-205ENST00000556310 RRN3P2A6NIE6 340 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 WDR64B1ANS9 1081 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 INSRRP14616 1297 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 NR5A1Q13285 461 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 GPNMBQ14956 572 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 LETM2Q2VYF4 491 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 KRT40Q6A162 431 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 PPP4R3AQ6IN85 833 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 TMEM92Q6UXU6 159 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 RPAINQ86UA6 219 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 ETNPPLQ8TBG4 499 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 ATP8B4Q8TF62 1192 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 TNFRSF25Q93038 417 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 NAP1L4Q99733 375 aaKnown RBP13.04□□□□□ -0.32
SLIRP-205ENST00000556310 TEKT3Q9BXF9 490 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 FTOQ9C0B1 505 aaKnown RBP eCLIP13.04□□□□□ -0.32
SLIRP-205ENST00000556310 ZNF302Q9NR11 478 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 PCDHA10Q9Y5I2 948 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 COL1A2P08123 1366 aa13.04□□□□□ -0.32
SLIRP-205ENST00000556310 CHD9Q3L8U1 2897 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 TMEM265A0A087WTH1 108 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 ZBBXA8MT70 800 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 RSPH10B2B2RC85 870 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 SLC37A4O43826 429 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 NBNO60934 754 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 PSMD10O75832 226 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 BAIAP3O94812 1187 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 RPLP2P05387 115 aaKnown RBP13.03□□□□□ -0.32
SLIRP-205ENST00000556310 PSAPP07602 524 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 RSPH10BP0C881 870 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 SFNP31947 248 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 JAK3P52333 1124 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 FOSBP53539 338 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 IGBP1P78318 339 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 MBTPS1Q14703 1052 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 EARS2Q5JPH6 523 aaKnown RBP13.03□□□□□ -0.32
SLIRP-205ENST00000556310 MARCH8Q5T0T0 291 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 PDXDC2PQ6P474 469 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 CNKSR3Q6P9H4 555 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 DIS3L2Q8IYB7 885 aaKnown RBP13.03□□□□□ -0.32
SLIRP-205ENST00000556310 DEFB123Q8N688 67 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 RDM1Q8NG50 284 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 MAFBQ9Y5Q3 323 aaPredicted RBP13.03□□□□□ -0.32
SLIRP-205ENST00000556310 SLC4A7Q9Y6M7 1214 aa13.03□□□□□ -0.32
SLIRP-205ENST00000556310 LOXHD1Q8IVV2 1947 aa13.02□□□□□ -0.32
SLIRP-205ENST00000556310 EVPLQ92817 2033 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 FAM205CA6NFA0 338 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 BTBD18B2RXH4 712 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 HBP1O60381 514 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 CTSHP09668 335 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 DNAJB2P25686 324 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 FAM26DQ5JW98 314 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 ZNF697Q5TEC3 545 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 SWSAP1Q6NVH7 229 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 B3GNT9Q6UX72 402 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 RUFY4Q6ZNE9 571 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 Q7L0L9 218 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 RSPH3Q86UC2 560 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 C8orf76Q96K31 380 aa13.02□□□□□ -0.33
SLIRP-205ENST00000556310 UNC45AQ9H3U1 944 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms