RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 ICAM3P32942 547 aa18.21■□□□□ 0.51
SDR39U1-217ENST00000556249 IFIT1BQ5T764 474 aaKnown RBP18.21■□□□□ 0.51
SDR39U1-217ENST00000556249 VN1R2Q8NFZ6 395 aa18.21■□□□□ 0.51
SDR39U1-217ENST00000556249 MICAL1Q8TDZ2 1067 aa18.21■□□□□ 0.51
SDR39U1-217ENST00000556249 PIBF1Q8WXW3 757 aa18.21■□□□□ 0.51
SDR39U1-217ENST00000556249 INPP4AQ96PE3 977 aaPredicted RBP18.21■□□□□ 0.51
SDR39U1-217ENST00000556249 UBAC1Q9BSL1 405 aa18.21■□□□□ 0.51
SDR39U1-217ENST00000556249 PDRG1Q9NUG6 133 aa18.21■□□□□ 0.51
SDR39U1-217ENST00000556249 ZFHX2Q9C0A1 2572 aaPredicted RBP18.2■□□□□ 0.5
SDR39U1-217ENST00000556249 FIBPO43427 364 aa18.2■□□□□ 0.5
SDR39U1-217ENST00000556249 IGBP1P78318 339 aa18.2■□□□□ 0.5
SDR39U1-217ENST00000556249 EXOSC10Q01780 885 aaKnown RBP18.2■□□□□ 0.5
SDR39U1-217ENST00000556249 TMEM62Q0P6H9 643 aa18.2■□□□□ 0.5
SDR39U1-217ENST00000556249 PPFIA1Q13136 1202 aa18.2■□□□□ 0.5
SDR39U1-217ENST00000556249 TAF2Q6P1X5 1199 aa18.2■□□□□ 0.5
SDR39U1-217ENST00000556249 CMTR2Q8IYT2 770 aaKnown RBP18.2■□□□□ 0.5
SDR39U1-217ENST00000556249 MTA3Q9BTC8 594 aa18.2■□□□□ 0.5
SDR39U1-217ENST00000556249 TLE6Q9H808 572 aa18.2■□□□□ 0.5
SDR39U1-217ENST00000556249 MYO15AQ9UKN7 3530 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 PALM3A6NDB9 673 aaPredicted RBP18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 PRC1O43663 620 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 CPA1P15085 419 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 TCF7P36402 384 aaPredicted RBP18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 MCM2P49736 904 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 ANKRD1Q15327 319 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 GRIK4Q16099 956 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 MARCH8Q5T0T0 291 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 TSHZ1Q6ZSZ6 1077 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 ASCL5Q7RTU5 278 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 CRIPAKQ8N1N5 446 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 SAMD3Q8N6K7 520 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 KAT6AQ92794 2004 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 TMEM87BQ96K49 555 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 APOL5Q9BWW9 433 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 FAM49AQ9H0Q0 323 aaPredicted RBP18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 TUBE1Q9UJT0 475 aa18.19■□□□□ 0.5
SDR39U1-217ENST00000556249 BAZ2BQ9UIF8 2168 aaKnown RBP18.18■□□□□ 0.5
SDR39U1-217ENST00000556249 CYTH3O43739 400 aa18.18■□□□□ 0.5
SDR39U1-217ENST00000556249 SART3Q15020 963 aaKnown RBP18.18■□□□□ 0.5
SDR39U1-217ENST00000556249 NAALADL2Q58DX5 795 aa18.18■□□□□ 0.5
SDR39U1-217ENST00000556249 CYB5R4Q7L1T6 521 aa18.18■□□□□ 0.5
SDR39U1-217ENST00000556249 RSPH3Q86UC2 560 aa18.18■□□□□ 0.5
SDR39U1-217ENST00000556249 SNX21Q969T3 373 aa18.18■□□□□ 0.5
SDR39U1-217ENST00000556249 PLXNA4Q9HCM2 1894 aa18.18■□□□□ 0.5
SDR39U1-217ENST00000556249 ATP9AO75110 1047 aa18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 ANTXR2P58335 489 aa18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 MRPS6P82932 125 aaKnown RBP18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 FGD1P98174 961 aa18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 SEC23AQ15436 765 aa18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 PTPN21Q16825 1174 aa18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 NPAS4Q8IUM7 802 aa18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 FBXL16Q8N461 479 aa18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 SUSD6Q92537 303 aa18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 RIOX1Q9H6W3 641 aa18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 PKD2L1Q9P0L9 805 aa18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 HCSTQ9UBK5 93 aa18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 PLXNA3P51805 1871 aa18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 FRMPD4Q14CM0 1322 aa18.17■□□□□ 0.5
SDR39U1-217ENST00000556249 GSTTP1A0A1W2PQM5 241 aa18.16■□□□□ 0.5
SDR39U1-217ENST00000556249 ERICH2A1L162 156 aa18.16■□□□□ 0.5
SDR39U1-217ENST00000556249 STAM2O75886 525 aa18.16■□□□□ 0.5
SDR39U1-217ENST00000556249 ERVFC1P60507 584 aa18.16■□□□□ 0.5
SDR39U1-217ENST00000556249 COL9A3Q14050 684 aaPredicted RBP18.16■□□□□ 0.5
SDR39U1-217ENST00000556249 USP17L6PQ6QN14 398 aa18.16■□□□□ 0.5
SDR39U1-217ENST00000556249 ZBTB33Q86T24 672 aa18.16■□□□□ 0.5
SDR39U1-217ENST00000556249 HSCBQ8IWL3 235 aa18.16■□□□□ 0.5
SDR39U1-217ENST00000556249 TCEANC2Q96MN5 208 aa18.16■□□□□ 0.5
SDR39U1-217ENST00000556249 AGXT2Q9BYV1 514 aa18.16■□□□□ 0.5
SDR39U1-217ENST00000556249 SENP2Q9HC62 589 aa18.16■□□□□ 0.5
SDR39U1-217ENST00000556249 CDH22Q9UJ99 828 aa18.16■□□□□ 0.5
SDR39U1-217ENST00000556249 PADI3Q9ULW8 664 aa18.16■□□□□ 0.5
SDR39U1-217ENST00000556249 CACNA1HO95180 2353 aa18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 PNMA6FA0A0J9YX94 578 aa18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 MBLAC1A4D2B0 266 aaPredicted RBP18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 IFIT3O14879 490 aaKnown RBP18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 AK2P54819 239 aa18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 BECN1Q14457 450 aa18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 TMEM266Q2M3C6 531 aa18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 SPOUT1Q5T280 376 aaKnown RBP18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 Q6ZUG5 572 aa18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 ATP8B4Q8TF62 1192 aa18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 GLG1Q92896 1179 aa18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 RIPOR3Q96MK2 946 aa18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 SENP7Q9BQF6 1050 aa18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 TMX1Q9H3N1 280 aa18.15■□□□□ 0.5
SDR39U1-217ENST00000556249 PTPRZ1P23471 2315 aaPredicted RBP18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 STAG3L1P0CL83 205 aa18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 SCG2P13521 617 aa18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 ATF7P17544 494 aaPredicted RBP18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 APOBRQ0VD83 1088 aa18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 GRM4Q14833 912 aa18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 DUSP6Q16828 381 aa18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 TMTC2Q8N394 836 aa18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 SMARCC2Q8TAQ2 1214 aa18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 TRAPPC12Q8WVT3 735 aa18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 LRRC2Q9BYS8 371 aa18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 IRF2BPLQ9H1B7 796 aa18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 SMOC2Q9H3U7 446 aa18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 ERAP1Q9NZ08 941 aa18.14■□□□□ 0.49
SDR39U1-217ENST00000556249 LRFN2Q9ULH4 789 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms