RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 TBX3O15119 743 aa17.13■□□□□ 0.33
ACTN1-217ENST00000556203 CXCL10P02778 98 aa17.13■□□□□ 0.33
ACTN1-217ENST00000556203 ACTN1P12814 892 aa17.13■□□□□ 0.33
ACTN1-217ENST00000556203 ATP2B1P20020 1258 aa17.13■□□□□ 0.33
ACTN1-217ENST00000556203 MBTPS1Q14703 1052 aa17.13■□□□□ 0.33
ACTN1-217ENST00000556203 FAM109BQ6ICB4 259 aaPredicted RBP17.13■□□□□ 0.33
ACTN1-217ENST00000556203 B3GNT9Q6UX72 402 aa17.13■□□□□ 0.33
ACTN1-217ENST00000556203 RDM1Q8NG50 284 aa17.13■□□□□ 0.33
ACTN1-217ENST00000556203 BBXQ8WY36 941 aaPredicted RBP17.13■□□□□ 0.33
ACTN1-217ENST00000556203 HAS1Q92839 578 aa17.13■□□□□ 0.33
ACTN1-217ENST00000556203 VAV3Q9UKW4 847 aa17.13■□□□□ 0.33
ACTN1-217ENST00000556203 KIF3AQ9Y496 699 aa17.13■□□□□ 0.33
ACTN1-217ENST00000556203 SMAD3P84022 425 aaKnown RBP17.12■□□□□ 0.33
ACTN1-217ENST00000556203 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
ACTN1-217ENST00000556203 UGCGQ16739 394 aa17.12■□□□□ 0.33
ACTN1-217ENST00000556203 MTHFD1LQ6UB35 978 aa17.12■□□□□ 0.33
ACTN1-217ENST00000556203 RSPH3Q86UC2 560 aa17.12■□□□□ 0.33
ACTN1-217ENST00000556203 DNAJB3Q8WWF6 145 aa17.12■□□□□ 0.33
ACTN1-217ENST00000556203 FAM49AQ9H0Q0 323 aaPredicted RBP17.12■□□□□ 0.33
ACTN1-217ENST00000556203 PCDHA2Q9Y5H9 948 aa17.12■□□□□ 0.33
ACTN1-217ENST00000556203 GRXCR1A8MXD5 290 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 KIF28PB7ZC32 967 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 EML1O00423 815 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 ZNF862O60290 1169 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 BAG4O95429 457 aaKnown RBP17.11■□□□□ 0.33
ACTN1-217ENST00000556203 KLRC1P26715 233 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 GJB2P29033 226 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 PRKCEQ02156 737 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 PPP2R5CQ13362 524 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 CALCRLQ16602 461 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 ZNF484Q5JVG2 852 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 FAM26DQ5JW98 314 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 GPR153Q6NV75 609 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 RPAINQ86UA6 219 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 SLFN12Q8IYM2 578 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 FAM167AQ96KS9 214 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 SMC3Q9UQE7 1217 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 SLC4A7Q9Y6M7 1214 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 COL1A2P08123 1366 aa17.11■□□□□ 0.33
ACTN1-217ENST00000556203 TANC1Q9C0D5 1861 aa17.1■□□□□ 0.33
ACTN1-217ENST00000556203 ZBTB42B2RXF5 422 aa17.1■□□□□ 0.33
ACTN1-217ENST00000556203 NEMFO60524 1076 aa17.1■□□□□ 0.33
ACTN1-217ENST00000556203 CHRNA1P02708 482 aa17.1■□□□□ 0.33
ACTN1-217ENST00000556203 OATP04181 439 aa17.1■□□□□ 0.33
ACTN1-217ENST00000556203 TCTN1Q2MV58 587 aa17.1■□□□□ 0.33
ACTN1-217ENST00000556203 CNKSR3Q6P9H4 555 aa17.1■□□□□ 0.33
ACTN1-217ENST00000556203 NOSTRINQ8IVI9 506 aa17.1■□□□□ 0.33
ACTN1-217ENST00000556203 CEP131Q9UPN4 1083 aa17.1■□□□□ 0.33
ACTN1-217ENST00000556203 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.1■□□□□ 0.33
ACTN1-217ENST00000556203 BAIAP3O94812 1187 aa17.09■□□□□ 0.33
ACTN1-217ENST00000556203 MCM7P33993 719 aa17.09■□□□□ 0.33
ACTN1-217ENST00000556203 MGAT3Q09327 533 aa17.09■□□□□ 0.33
ACTN1-217ENST00000556203 NCAPH2Q6IBW4 605 aa17.09■□□□□ 0.33
ACTN1-217ENST00000556203 BANK1Q8NDB2 785 aa17.09■□□□□ 0.33
ACTN1-217ENST00000556203 OSBPL7Q9BZF2 842 aa17.09■□□□□ 0.33
ACTN1-217ENST00000556203 NRBP2Q9NSY0 501 aa17.09■□□□□ 0.33
ACTN1-217ENST00000556203 CDY2AQ9Y6F7 541 aa17.09■□□□□ 0.33
ACTN1-217ENST00000556203 SCN5AQ14524 2016 aa17.08■□□□□ 0.33
ACTN1-217ENST00000556203 TRIP12Q14669 1992 aaPredicted RBP17.08■□□□□ 0.33
ACTN1-217ENST00000556203 SMIM35A0A1B0GVV1 85 aa17.08■□□□□ 0.32
ACTN1-217ENST00000556203 C22orf31O95567 290 aa17.08■□□□□ 0.32
ACTN1-217ENST00000556203 RPLP2P05387 115 aaKnown RBP17.08■□□□□ 0.32
ACTN1-217ENST00000556203 ATP2A2P16615 1042 aaKnown RBP17.08■□□□□ 0.32
ACTN1-217ENST00000556203 U2AF2P26368 475 aaKnown RBP eCLIP17.08■□□□□ 0.32
ACTN1-217ENST00000556203 PSMC5P62195 406 aa17.08■□□□□ 0.32
ACTN1-217ENST00000556203 MRPS6P82932 125 aaKnown RBP17.08■□□□□ 0.32
ACTN1-217ENST00000556203 TMEM62Q0P6H9 643 aa17.08■□□□□ 0.32
ACTN1-217ENST00000556203 CUL4AQ13619 759 aa17.08■□□□□ 0.32
ACTN1-217ENST00000556203 ZNF174Q15697 407 aa17.08■□□□□ 0.32
ACTN1-217ENST00000556203 Q7L0L9 218 aa17.08■□□□□ 0.32
ACTN1-217ENST00000556203 DEFB123Q8N688 67 aa17.08■□□□□ 0.32
ACTN1-217ENST00000556203 DBF4BQ8NFT6 615 aa17.08■□□□□ 0.32
ACTN1-217ENST00000556203 MTMR9Q96QG7 549 aa17.08■□□□□ 0.32
ACTN1-217ENST00000556203 PBX4Q9BYU1 374 aa17.08■□□□□ 0.32
ACTN1-217ENST00000556203 TMEM60Q9H2L4 133 aa17.08■□□□□ 0.32
ACTN1-217ENST00000556203 NOL7Q9UMY1 257 aaKnown RBP17.08■□□□□ 0.32
ACTN1-217ENST00000556203 ABHD14A-ACY1A0A1B0GW23 586 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 H3BQV1 296 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 M0QZ92 97 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 SLC34A2O95436 690 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 GHRP10912 638 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 DNAJB2P25686 324 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 PBX2P40425 430 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 TXKP42681 527 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 KCNJ6P48051 423 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 TRAPPC10P48553 1259 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 SPIRE1Q08AE8 756 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 IKBKEQ14164 716 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 EPHA7Q15375 998 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 PLEKHG4Q58EX7 1191 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 TTC38Q5R3I4 469 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 ZNF697Q5TEC3 545 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 IER5Q5VY09 327 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 MCTP1Q6DN14 999 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 SEPT8Q92599 483 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 TTC12Q9H892 705 aaPredicted RBP17.07■□□□□ 0.32
ACTN1-217ENST00000556203 SEPT9Q9UHD8 586 aaPredicted RBP17.07■□□□□ 0.32
ACTN1-217ENST00000556203 PCDHA12Q9UN75 941 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 TRPV2Q9Y5S1 764 aa17.07■□□□□ 0.32
ACTN1-217ENST00000556203 TMEM150BA6NC51 233 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms