RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 VTI1AQ96AJ9 217 aa12.86□□□□□ -0.35
GABRB3-210ENST00000556166 ZBTB10Q96DT7 871 aa12.86□□□□□ -0.35
GABRB3-210ENST00000556166 CEP89Q96ST8 783 aa12.86□□□□□ -0.35
GABRB3-210ENST00000556166 PANK2Q9BZ23 570 aa12.86□□□□□ -0.35
GABRB3-210ENST00000556166 RAB34Q9BZG1 259 aa12.86□□□□□ -0.35
GABRB3-210ENST00000556166 CCSER1Q9C0I3 900 aa12.86□□□□□ -0.35
GABRB3-210ENST00000556166 ZSWIM4Q9H7M6 989 aa12.86□□□□□ -0.35
GABRB3-210ENST00000556166 TUFT1Q9NNX1 390 aa12.86□□□□□ -0.35
GABRB3-210ENST00000556166 DNAH12Q6ZR08 3092 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 DDX11L8A8MPP1 907 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 GADD45BO75293 160 aaPredicted RBP12.85□□□□□ -0.35
GABRB3-210ENST00000556166 SMIM10L2AP0DMW4 78 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 SMIM10L2BP0DMW5 78 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 SLC26A2P50443 739 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 CDK7P50613 346 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 ZNF200P98182 395 aaPredicted RBP12.85□□□□□ -0.35
GABRB3-210ENST00000556166 KARSQ15046 597 aaKnown RBP12.85□□□□□ -0.35
GABRB3-210ENST00000556166 TPRNQ4KMQ1 711 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 TMEM119Q4V9L6 283 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 HYIQ5T013 277 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 MARCH8Q5T0T0 291 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 RESP18Q5W5W9 173 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 ADALQ6DHV7 355 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 ERMNQ8TAM6 284 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 PIGOQ8TEQ8 1089 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 ATP6V0A1Q93050 837 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 GLT1D1Q96MS3 346 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 CTAGE1Q96RT6 745 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 SH2D3AQ9BRG2 576 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 SETD4Q9NVD3 440 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 HDAC6Q9UBN7 1215 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 KIAA1024Q9UPX6 916 aa12.85□□□□□ -0.35
GABRB3-210ENST00000556166 MYH15Q9Y2K3 1946 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 MKI67P46013 3256 aaKnown RBP12.84□□□□□ -0.35
GABRB3-210ENST00000556166 OATP04181 439 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 INSRRP14616 1297 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 CAPN2P17655 700 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 CMA1P23946 247 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 HOXC8P31273 242 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 UBA7P41226 1012 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 ATN1P54259 1190 aaPredicted RBP12.84□□□□□ -0.35
GABRB3-210ENST00000556166 NPEPPSP55786 919 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 TARBP2Q15633 366 aaKnown RBP12.84□□□□□ -0.35
GABRB3-210ENST00000556166 ZRSR1Q15695 479 aaKnown RBP12.84□□□□□ -0.35
GABRB3-210ENST00000556166 XKR3Q5GH77 459 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 PLA2G4FQ68DD2 849 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 SLC39A5Q6ZMH5 540 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 CKAP2LQ8IYA6 745 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 TMEM87AQ8NBN3 555 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 NEK9Q8TD19 979 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 TRAPPC12Q8WVT3 735 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 NIFKQ9BYG3 293 aaKnown RBP12.84□□□□□ -0.35
GABRB3-210ENST00000556166 GOLPH3LQ9H4A5 285 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 C11orf49Q9H6J7 331 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 STARD7Q9NQZ5 370 aa12.84□□□□□ -0.35
GABRB3-210ENST00000556166 DDX19AQ9NUU7 478 aaKnown RBP12.84□□□□□ -0.35
GABRB3-210ENST00000556166 ZNF215Q9UL58 517 aaPredicted RBP12.84□□□□□ -0.35
GABRB3-210ENST00000556166 FRMPD3Q5JV73 1810 aa12.83□□□□□ -0.36
GABRB3-210ENST00000556166 E9PMD0 336 aa12.83□□□□□ -0.36
GABRB3-210ENST00000556166 ARVCFO00192 962 aa12.83□□□□□ -0.36
GABRB3-210ENST00000556166 PLCG1P19174 1290 aa12.83□□□□□ -0.36
GABRB3-210ENST00000556166 YWHABP31946 246 aaKnown RBP12.83□□□□□ -0.36
GABRB3-210ENST00000556166 ADAM17P78536 824 aa12.83□□□□□ -0.36
GABRB3-210ENST00000556166 GDF6Q6KF10 455 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-210ENST00000556166 NFRKBQ6P4R8 1299 aa12.83□□□□□ -0.36
GABRB3-210ENST00000556166 NECAB2Q7Z6G3 386 aa12.83□□□□□ -0.36
GABRB3-210ENST00000556166 BBXQ8WY36 941 aaPredicted RBP12.83□□□□□ -0.36
GABRB3-210ENST00000556166 KATNAL1Q9BW62 490 aa12.83□□□□□ -0.36
GABRB3-210ENST00000556166 NRBP2Q9NSY0 501 aa12.83□□□□□ -0.36
GABRB3-210ENST00000556166 BLOC1S4Q9NUP1 217 aa12.83□□□□□ -0.36
GABRB3-210ENST00000556166 TRPC6Q9Y210 931 aa12.83□□□□□ -0.36
GABRB3-210ENST00000556166 A0A0U1RQG5 324 aaPredicted RBP12.82□□□□□ -0.36
GABRB3-210ENST00000556166 A0A1B0GVL5 298 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 A0A1W2PQ27 194 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 A0A1W2PQ64 194 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 A0A1W2PQD8 194 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 RBAK-RBAKDNI3L0D1 243 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 HBP1O60381 514 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 PRPF40AO75400 957 aaKnown RBP12.82□□□□□ -0.36
GABRB3-210ENST00000556166 XRCC6P12956 609 aaKnown RBP eCLIP12.82□□□□□ -0.36
GABRB3-210ENST00000556166 MUTP22033 750 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 SNX17Q15036 470 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 GRIK4Q16099 956 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 LRRC26Q2I0M4 334 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 NAALADL2Q58DX5 795 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 HAUS3Q68CZ6 603 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 SESTD1Q86VW0 696 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 C7orf31Q8N865 590 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 LMBR1Q8WVP7 490 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 NACC1Q96RE7 527 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 TRPV6Q9H1D0 765 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 HPSEQ9Y251 543 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 STK24Q9Y6E0 443 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 TCHHQ07283 1943 aa12.82□□□□□ -0.36
GABRB3-210ENST00000556166 FAM237AA0A1B0GTK4 181 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 SLC26A4O43511 780 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 IGBP1P78318 339 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 PPFIA1Q13136 1202 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 E2F4Q16254 413 aa12.81□□□□□ -0.36
GABRB3-210ENST00000556166 PDILTQ8N807 584 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms