RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 PASKQ96RG2 1323 aa4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 PLEKHG2Q9H7P9 1386 aa4.4□□□□□ -1.71
EFCAB11-210ENST00000556078 USP6P35125 1406 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 EEA1Q15075 1411 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 A0A0G2JLW4 131 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 PATE3B3GLJ2 98 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 MUSKO15146 869 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 NME1P15531 152 aaKnown RBP4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 EPHB4P54760 987 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 ANKRD39Q53RE8 183 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 SPDYAQ5MJ70 313 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 LZTR1Q8N653 840 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 DHRS1Q96LJ7 313 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 FCRL3Q96P31 734 aaPredicted RBP4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 ZNF341Q9BYN7 854 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 RNF181Q9P0P0 153 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 STK26Q9P289 416 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 ADAMTSL1Q8N6G6 1762 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 PAPPA2Q9BXP8 1791 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 BRD4O60885 1362 aaPredicted RBP4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 TRPM7Q96QT4 1865 aa4.39□□□□□ -1.71
EFCAB11-210ENST00000556078 MEIS3P2A8K0S8 358 aa4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 TLR3O15455 904 aaKnown RBP4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 NANOS3P60323 173 aaKnown RBP4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 DAB2P98082 770 aa4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 POU4F1Q01851 419 aa4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 LRRFIP1Q32MZ4 808 aaKnown RBP4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 AMER2Q8N7J2 671 aa4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 IGDCC4Q8TDY8 1250 aa4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 GCC1Q96CN9 775 aa4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 CHFRQ96EP1 664 aa4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 SUCOQ9UBS9 1254 aaKnown RBP4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 FBLN5Q9UBX5 448 aa4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 CACNA1AO00555 2505 aa4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 DAPK1P53355 1430 aa4.38□□□□□ -1.71
EFCAB11-210ENST00000556078 SLIT3O75094 1523 aa4.37□□□□□ -1.71
EFCAB11-210ENST00000556078 DDX3XO00571 662 aaKnown RBP eCLIP4.37□□□□□ -1.71
EFCAB11-210ENST00000556078 GREM1O60565 184 aa4.37□□□□□ -1.71
EFCAB11-210ENST00000556078 VEGFAP15692 232 aaPredicted RBP4.37□□□□□ -1.71
EFCAB11-210ENST00000556078 KCNA3P22001 575 aa4.37□□□□□ -1.71
EFCAB11-210ENST00000556078 RBM10P98175 930 aaKnown RBP4.37□□□□□ -1.71
EFCAB11-210ENST00000556078 PKN3Q6P5Z2 889 aa4.37□□□□□ -1.71
EFCAB11-210ENST00000556078 REXO1Q8N1G1 1221 aaKnown RBP4.37□□□□□ -1.71
EFCAB11-210ENST00000556078 MTA3Q9BTC8 594 aa4.37□□□□□ -1.71
EFCAB11-210ENST00000556078 FHOD1Q9Y613 1164 aa4.37□□□□□ -1.71
EFCAB11-210ENST00000556078 C4BP0C0L5 1744 aa4.37□□□□□ -1.71
EFCAB11-210ENST00000556078 MYOM3Q5VTT5 1437 aa4.37□□□□□ -1.71
EFCAB11-210ENST00000556078 ABCC6O95255 1503 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 RASSF10A6NK89 507 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 MINDY4BA8MYZ0 360 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 ITGA1P56199 1179 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 ZNF445P59923 1031 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 PPP2CBP62714 309 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 PPP2CAP67775 309 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 PSMD2Q13200 908 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 WWC2Q6AWC2 1192 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 RCSD1Q6JBY9 416 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 ETV3LQ6ZN32 361 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 MBD6Q96DN6 1003 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 CEP89Q96ST8 783 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 SLC9A7Q96T83 725 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 PARP2Q9UGN5 583 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 NSD2O96028 1365 aa4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 KDM6AO15550 1401 aaPredicted RBP4.36□□□□□ -1.71
EFCAB11-210ENST00000556078 GLTPD2A6NH11 291 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 C9IYK1 514 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 NPIPB8E9PQR5 432 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 ZNF623O75123 536 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 IFNGR1P15260 489 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 DPEP1P16444 411 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 MAP2K1Q02750 393 aaPredicted RBP4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 DPTQ07507 201 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 FOXE3Q13461 319 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 CSRP2Q16527 193 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 EAPPQ56P03 285 aaPredicted RBP4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 MIIPQ5JXC2 388 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 NOL9Q5SY16 702 aaKnown RBP4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 EEF1DP3Q658K8 133 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 SLFN13Q68D06 897 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 INTS3Q68E01 1043 aaKnown RBP4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 FBXL19Q6PCT2 694 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 MIB1Q86YT6 1006 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 CCDC144CPQ8IYA2 1237 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 SMARCC1Q92922 1105 aaPredicted RBP4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 GP6Q9HCN6 339 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 SF3B6Q9Y3B4 125 aaKnown RBP4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 RWDD3Q9Y3V2 267 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 SUPT16HQ9Y5B9 1047 aaKnown RBP4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 CPDO75976 1380 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 CACNA1SQ13698 1873 aa4.35□□□□□ -1.71
EFCAB11-210ENST00000556078 CEP290O15078 2479 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 PPP1R11O60927 126 aaPredicted RBP4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 PPFIA2O75334 1257 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 ZNF28P17035 718 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 PMS1P54277 932 aaKnown RBP4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 CLCQ05315 142 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 ABHD18Q0P651 414 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 SAFB2Q14151 953 aaKnown RBP eCLIP4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 DEFB115Q30KQ5 88 aa4.34□□□□□ -1.71
EFCAB11-210ENST00000556078 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms