RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 PALMO75781 387 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 CYP3A7P24462 503 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 NR2F2P24468 414 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 ARID5AQ03989 594 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 USP17L24Q0WX57 530 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 PAK2Q13177 524 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 KIAA0753Q2KHM9 967 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 QRICH1Q2TAL8 776 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 TUBB8Q3ZCM7 444 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 KLHDC7AQ5VTJ3 777 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 USP17L6PQ6QN14 398 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 HHIPL2Q6UWX4 724 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 SRLQ86TD4 932 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 VPS36Q86VN1 386 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 GPIHBP1Q8IV16 184 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 TBC1D5Q92609 795 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 CAVIN3Q969G5 261 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 SPAG5Q96R06 1193 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 KCNMB3Q9NPA1 279 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 RBM12Q9NTZ6 932 aaKnown RBP7.68□□□□□ -1.18
TDP1-213ENST00000555880 PLA2G2EQ9NZK7 142 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 AIPL1Q9NZN9 384 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 ARMCX3Q9UH62 379 aaPredicted RBP7.68□□□□□ -1.18
TDP1-213ENST00000555880 DMGDHQ9UI17 866 aaKnown RBP7.68□□□□□ -1.18
TDP1-213ENST00000555880 DNM3Q9UQ16 869 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 ZC3H4Q9UPT8 1303 aaKnown RBP7.68□□□□□ -1.18
TDP1-213ENST00000555880 NPHP3-ACAD11A0A0J9YXS1 232 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 SPDYE3A6NKU9 549 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 MYO1CO00159 1063 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 TBX3O15119 743 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 CALUO43852 315 aaPredicted RBP7.68□□□□□ -1.18
TDP1-213ENST00000555880 NOL4O94818 638 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 CLSTN1O94985 981 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 CYP11B2P19099 503 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 COL9A1P20849 921 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 SCNN1DP51172 638 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 TNNC1P63316 161 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 SLC7A5Q01650 507 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 APBA1Q02410 837 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 KCNH2Q12809 1159 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 EZH2Q15910 746 aaKnown RBP7.68□□□□□ -1.18
TDP1-213ENST00000555880 CDC37Q16543 378 aaPredicted RBP7.68□□□□□ -1.18
TDP1-213ENST00000555880 PROX2Q3B8N5 592 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 CDC42EP5Q6NZY7 148 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 LRRC31Q6UY01 552 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 FRMD5Q7Z6J6 570 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 FAM133AQ8N9E0 248 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 HDAC7Q8WUI4 952 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 SCFD1Q8WVM8 642 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 GJA10Q969M2 543 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 FAM107BQ9H098 131 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 DHX36Q9H2U1 1008 aaKnown RBP7.68□□□□□ -1.18
TDP1-213ENST00000555880 KCTD10Q9H3F6 313 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 KANSL2Q9H9L4 492 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 RSPH14Q9UHP6 348 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 HDAC9Q9UKV0 1011 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 PCDHA2Q9Y5H9 948 aa7.68□□□□□ -1.18
TDP1-213ENST00000555880 FRMD3A2A2Y4 597 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 KLRG2A4D1S0 409 aaPredicted RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 POLRMTO00411 1230 aaKnown RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 TLR2O60603 784 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 SHOX2O60902 331 aaPredicted RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 TBCAO75347 108 aaKnown RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 FOSP01100 380 aaPredicted RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 AFPP02771 609 aaKnown RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 XRCC5P13010 732 aaKnown RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 RPL13P26373 211 aaKnown RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 ANXA13P27216 316 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 DNA2P51530 1060 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 SLC12A3P55017 1021 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 ARHGAP4P98171 946 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 SLC20A2Q08357 652 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 IKQ13123 557 aaPredicted RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 ENOX2Q16206 610 aaKnown RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 KNOP1Q1ED39 458 aaKnown RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 PRR16Q569H4 304 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 SLFN13Q68D06 897 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 ZC3H3Q8IXZ2 948 aaKnown RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 CERS5Q8N5B7 392 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 RIN2Q8WYP3 895 aaPredicted RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 MBOAT7Q96N66 472 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 HINFPQ9BQA5 517 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 MXD3Q9BW11 206 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 AMNQ9BXJ7 453 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 METTL14Q9HCE5 456 aaKnown RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 PLCB1Q9NQ66 1216 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 SMARCAL1Q9NZC9 954 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 NYAP2Q9P242 653 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 FEZ2Q9UHY8 353 aaPredicted RBP7.67□□□□□ -1.18
TDP1-213ENST00000555880 SALL4Q9UJQ4 1053 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 PCDHGC5Q9Y5F6 944 aa7.67□□□□□ -1.18
TDP1-213ENST00000555880 ADAMTSL1Q8N6G6 1762 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 A0A087X0T9 212 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 SHTN1A0MZ66 631 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 BTNL10A8MVZ5 291 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 AGPSO00116 658 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 CES2O00748 559 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 PDXKO00764 312 aa7.66□□□□□ -1.18
TDP1-213ENST00000555880 SLC16A3O15427 465 aaKnown RBP7.66□□□□□ -1.18
TDP1-213ENST00000555880 PPP1R12BO60237 982 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms