RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 U2AF2P26368 475 aaKnown RBP eCLIP25.74■■□□□ 1.71
CDKN3-208ENST00000555837 IGBP1P78318 339 aa25.74■■□□□ 1.71
CDKN3-208ENST00000555837 DEFB128Q7Z7B8 93 aa25.74■■□□□ 1.71
CDKN3-208ENST00000555837 EXOC8Q8IYI6 725 aa25.74■■□□□ 1.71
CDKN3-208ENST00000555837 DHX38Q92620 1227 aaKnown RBP25.74■■□□□ 1.71
CDKN3-208ENST00000555837 UIMC1Q96RL1 719 aa25.74■■□□□ 1.71
CDKN3-208ENST00000555837 CD2BP2O95400 341 aaKnown RBP25.73■■□□□ 1.71
CDKN3-208ENST00000555837 ACRP10323 421 aa25.73■■□□□ 1.71
CDKN3-208ENST00000555837 TMOD1P28289 359 aa25.73■■□□□ 1.71
CDKN3-208ENST00000555837 SMAD3P84022 425 aaKnown RBP25.73■■□□□ 1.71
CDKN3-208ENST00000555837 TRIM71Q2Q1W2 868 aaKnown RBP25.73■■□□□ 1.71
CDKN3-208ENST00000555837 C9orf50Q5SZB4 431 aa25.73■■□□□ 1.71
CDKN3-208ENST00000555837 ZNF618Q5T7W0 954 aa25.73■■□□□ 1.71
CDKN3-208ENST00000555837 INTS4Q96HW7 963 aaKnown RBP25.73■■□□□ 1.71
CDKN3-208ENST00000555837 TRIOBPQ9H2D6 2365 aa25.73■■□□□ 1.71
CDKN3-208ENST00000555837 SMIM35A0A1B0GVV1 85 aa25.72■■□□□ 1.71
CDKN3-208ENST00000555837 OATP04181 439 aa25.72■■□□□ 1.71
CDKN3-208ENST00000555837 FXR1P51114 621 aaKnown RBP eCLIP25.72■■□□□ 1.71
CDKN3-208ENST00000555837 EPHB4P54760 987 aa25.72■■□□□ 1.71
CDKN3-208ENST00000555837 PSMC5P62195 406 aa25.72■■□□□ 1.71
CDKN3-208ENST00000555837 CUL4AQ13619 759 aa25.72■■□□□ 1.71
CDKN3-208ENST00000555837 XKR3Q5GH77 459 aa25.72■■□□□ 1.71
CDKN3-208ENST00000555837 EARS2Q5JPH6 523 aaKnown RBP25.72■■□□□ 1.71
CDKN3-208ENST00000555837 LARP1BQ659C4 914 aaKnown RBP25.72■■□□□ 1.71
CDKN3-208ENST00000555837 MCTP1Q6DN14 999 aa25.72■■□□□ 1.71
CDKN3-208ENST00000555837 CNKSR3Q6P9H4 555 aa25.72■■□□□ 1.71
CDKN3-208ENST00000555837 POTEDQ86YR6 584 aa25.72■■□□□ 1.71
CDKN3-208ENST00000555837 USP38Q8NB14 1042 aa25.72■■□□□ 1.71
CDKN3-208ENST00000555837 NEK9Q8TD19 979 aa25.72■■□□□ 1.71
CDKN3-208ENST00000555837 JPH2Q9BR39 696 aaPredicted RBP25.72■■□□□ 1.71
CDKN3-208ENST00000555837 PPME1Q9Y570 386 aa25.72■■□□□ 1.71
CDKN3-208ENST00000555837 SLC4A7Q9Y6M7 1214 aa25.72■■□□□ 1.71
CDKN3-208ENST00000555837 MYH9P35579 1960 aaKnown RBP25.71■■□□□ 1.71
CDKN3-208ENST00000555837 TANC1Q9C0D5 1861 aa25.71■■□□□ 1.71
CDKN3-208ENST00000555837 CXCL10P02778 98 aa25.71■■□□□ 1.71
CDKN3-208ENST00000555837 P4HBP07237 508 aaKnown RBP25.71■■□□□ 1.71
CDKN3-208ENST00000555837 PDIA4P13667 645 aaKnown RBP25.71■■□□□ 1.71
CDKN3-208ENST00000555837 KCNJ6P48051 423 aa25.71■■□□□ 1.71
CDKN3-208ENST00000555837 IKBKEQ14164 716 aa25.71■■□□□ 1.71
CDKN3-208ENST00000555837 EPHA7Q15375 998 aa25.71■■□□□ 1.71
CDKN3-208ENST00000555837 FAM26DQ5JW98 314 aa25.71■■□□□ 1.71
CDKN3-208ENST00000555837 ODR4Q5SWX8 454 aa25.71■■□□□ 1.71
CDKN3-208ENST00000555837 B3GNT9Q6UX72 402 aa25.71■■□□□ 1.71
CDKN3-208ENST00000555837 C16orf59Q7L2K0 433 aa25.71■■□□□ 1.71
CDKN3-208ENST00000555837 APBB2Q92870 758 aa25.71■■□□□ 1.71
CDKN3-208ENST00000555837 STK24Q9Y6E0 443 aa25.71■■□□□ 1.71
CDKN3-208ENST00000555837 SQORQ9Y6N5 450 aa25.71■■□□□ 1.71
CDKN3-208ENST00000555837 ABHD14A-ACY1A0A1B0GW23 586 aa25.7■■□□□ 1.7
CDKN3-208ENST00000555837 ZBBXA8MT70 800 aa25.7■■□□□ 1.7
CDKN3-208ENST00000555837 K7ELQ4 463 aaPredicted RBP25.7■■□□□ 1.7
CDKN3-208ENST00000555837 QARSP47897 775 aaKnown RBP25.7■■□□□ 1.7
CDKN3-208ENST00000555837 CDC42EP1Q00587 391 aa25.7■■□□□ 1.7
CDKN3-208ENST00000555837 HIC1Q14526 733 aa25.7■■□□□ 1.7
CDKN3-208ENST00000555837 TMEM266Q2M3C6 531 aa25.7■■□□□ 1.7
CDKN3-208ENST00000555837 RILPL1Q5EBL4 403 aa25.7■■□□□ 1.7
CDKN3-208ENST00000555837 MTHFD1LQ6UB35 978 aa25.7■■□□□ 1.7
CDKN3-208ENST00000555837 OTOP2Q7RTS6 562 aa25.7■■□□□ 1.7
CDKN3-208ENST00000555837 HSCBQ8IWL3 235 aa25.7■■□□□ 1.7
CDKN3-208ENST00000555837 PHOSPHO2Q8TCD6 241 aa25.7■■□□□ 1.7
CDKN3-208ENST00000555837 SEPT8Q92599 483 aa25.7■■□□□ 1.7
CDKN3-208ENST00000555837 SNX21Q969T3 373 aa25.7■■□□□ 1.7
CDKN3-208ENST00000555837 RAB34Q9BZG1 259 aa25.7■■□□□ 1.7
CDKN3-208ENST00000555837 TTC12Q9H892 705 aaPredicted RBP25.7■■□□□ 1.7
CDKN3-208ENST00000555837 LAD1O00515 517 aa25.69■■□□□ 1.7
CDKN3-208ENST00000555837 ATP2B1P20020 1258 aa25.69■■□□□ 1.7
CDKN3-208ENST00000555837 KLRC1P26715 233 aa25.69■■□□□ 1.7
CDKN3-208ENST00000555837 MCM7P33993 719 aa25.69■■□□□ 1.7
CDKN3-208ENST00000555837 PRKCEQ02156 737 aa25.69■■□□□ 1.7
CDKN3-208ENST00000555837 TTC38Q5R3I4 469 aa25.69■■□□□ 1.7
CDKN3-208ENST00000555837 MARCH8Q5T0T0 291 aa25.69■■□□□ 1.7
CDKN3-208ENST00000555837 RASIP1Q5U651 963 aa25.69■■□□□ 1.7
CDKN3-208ENST00000555837 OTUD6AQ7L8S5 288 aa25.69■■□□□ 1.7
CDKN3-208ENST00000555837 HAS1Q92839 578 aa25.69■■□□□ 1.7
CDKN3-208ENST00000555837 SLC9A7Q96T83 725 aa25.69■■□□□ 1.7
CDKN3-208ENST00000555837 VAV3Q9UKW4 847 aa25.69■■□□□ 1.7
CDKN3-208ENST00000555837 TRIP12Q14669 1992 aaPredicted RBP25.68■■□□□ 1.7
CDKN3-208ENST00000555837 FAM205CA6NFA0 338 aa25.68■■□□□ 1.7
CDKN3-208ENST00000555837 RAB30Q15771 203 aa25.68■■□□□ 1.7
CDKN3-208ENST00000555837 ERMNQ8TAM6 284 aa25.68■■□□□ 1.7
CDKN3-208ENST00000555837 DNAJB3Q8WWF6 145 aa25.68■■□□□ 1.7
CDKN3-208ENST00000555837 MAP7D2Q96T17 732 aa25.68■■□□□ 1.7
CDKN3-208ENST00000555837 TMEM265A0A087WTH1 108 aa25.67■■□□□ 1.7
CDKN3-208ENST00000555837 KIF28PB7ZC32 967 aa25.67■■□□□ 1.7
CDKN3-208ENST00000555837 HSP90AA1P07900 732 aaKnown RBP25.67■■□□□ 1.7
CDKN3-208ENST00000555837 TXKP42681 527 aa25.67■■□□□ 1.7
CDKN3-208ENST00000555837 DNM2P50570 870 aa25.67■■□□□ 1.7
CDKN3-208ENST00000555837 MRPS6P82932 125 aaKnown RBP25.67■■□□□ 1.7
CDKN3-208ENST00000555837 TBC1D8BQ0IIM8 1120 aa25.67■■□□□ 1.7
CDKN3-208ENST00000555837 NCAPH2Q6IBW4 605 aa25.67■■□□□ 1.7
CDKN3-208ENST00000555837 NIFKQ9BYG3 293 aaKnown RBP25.67■■□□□ 1.7
CDKN3-208ENST00000555837 ZSWIM4Q9H7M6 989 aa25.67■■□□□ 1.7
CDKN3-208ENST00000555837 CTSHP09668 335 aa25.66■■□□□ 1.7
CDKN3-208ENST00000555837 OR52Z1P0C646 297 aa25.66■■□□□ 1.7
CDKN3-208ENST00000555837 FAM109BQ6ICB4 259 aaPredicted RBP25.66■■□□□ 1.7
CDKN3-208ENST00000555837 GJA10Q969M2 543 aa25.66■■□□□ 1.7
CDKN3-208ENST00000555837 MTMR9Q96QG7 549 aa25.66■■□□□ 1.7
CDKN3-208ENST00000555837 FAM49AQ9H0Q0 323 aaPredicted RBP25.66■■□□□ 1.7
CDKN3-208ENST00000555837 SEPT9Q9UHD8 586 aaPredicted RBP25.66■■□□□ 1.7
CDKN3-208ENST00000555837 MSRAQ9UJ68 235 aa25.66■■□□□ 1.7
CDKN3-208ENST00000555837 NBNO60934 754 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms