RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 KIF4AO95239 1232 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 FTCDO95954 541 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 CPP00450 1065 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 SREBF1P36956 1147 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 FKBP1AP62942 108 aaKnown RBP17.71■□□□□ 0.43
TUBB3-209ENST00000555609 GUCY2DQ02846 1103 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 USP17L24Q0WX57 530 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 SLC27A3Q5K4L6 730 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 USP17L6PQ6QN14 398 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 KDM7AQ6ZMT4 941 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 SYCE1Q8N0S2 351 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 CERS5Q8N5B7 392 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 SCFD2Q8WU76 684 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 ISCUQ9H1K1 167 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 SMARCAL1Q9NZC9 954 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 EHD2Q9NZN4 543 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 NENFQ9UMX5 172 aa17.71■□□□□ 0.43
TUBB3-209ENST00000555609 ATXN2Q99700 1313 aaKnown RBP17.71■□□□□ 0.43
TUBB3-209ENST00000555609 KIF13BQ9NQT8 1826 aa17.71■□□□□ 0.42
TUBB3-209ENST00000555609 ARFGEF1Q9Y6D6 1849 aa17.7■□□□□ 0.42
TUBB3-209ENST00000555609 NPHP3-ACAD11A0A0J9YXS1 232 aa17.7■□□□□ 0.42
TUBB3-209ENST00000555609 BHMG1C9JSJ3 638 aaPredicted RBP17.7■□□□□ 0.42
TUBB3-209ENST00000555609 TRIM66O15016 1216 aa17.7■□□□□ 0.42
TUBB3-209ENST00000555609 CYP3A4P08684 503 aa17.7■□□□□ 0.42
TUBB3-209ENST00000555609 PON1P27169 355 aa17.7■□□□□ 0.42
TUBB3-209ENST00000555609 HSPA9P38646 679 aaKnown RBP17.7■□□□□ 0.42
TUBB3-209ENST00000555609 CARSP49589 748 aaKnown RBP17.7■□□□□ 0.42
TUBB3-209ENST00000555609 GNGT1P63211 74 aa17.7■□□□□ 0.42
TUBB3-209ENST00000555609 APOBEC3HQ6NTF7 200 aaKnown RBP17.7■□□□□ 0.42
TUBB3-209ENST00000555609 CCDC125Q86Z20 511 aa17.7■□□□□ 0.42
TUBB3-209ENST00000555609 CLEC10AQ8IUN9 316 aa17.7■□□□□ 0.42
TUBB3-209ENST00000555609 GMCL1P1Q8NEA9 526 aa17.7■□□□□ 0.42
TUBB3-209ENST00000555609 KRT12Q99456 494 aa17.7■□□□□ 0.42
TUBB3-209ENST00000555609 TRIM34Q9BYJ4 488 aa17.7■□□□□ 0.42
TUBB3-209ENST00000555609 EFCC1Q9HA90 598 aa17.7■□□□□ 0.42
TUBB3-209ENST00000555609 SYNPO2Q9UMS6 1093 aa17.7■□□□□ 0.42
TUBB3-209ENST00000555609 HMGB1P1B2RPK0 211 aaPredicted RBP17.69■□□□□ 0.42
TUBB3-209ENST00000555609 EIF3DO15371 548 aaKnown RBP eCLIP17.69■□□□□ 0.42
TUBB3-209ENST00000555609 EYA4O95677 639 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 SPATA31C1P0DKV0 1188 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 FERP16591 822 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 HDLBPQ00341 1268 aaKnown RBP17.69■□□□□ 0.42
TUBB3-209ENST00000555609 PTK2Q05397 1052 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 EPHA7Q15375 998 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 SLC15A2Q16348 729 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 TTMPQ5BVD1 217 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 B4GALNT4Q76KP1 1039 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 ZNF571Q7Z3V5 609 aaPredicted RBP17.69■□□□□ 0.42
TUBB3-209ENST00000555609 SLFN11Q7Z7L1 901 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 ZDHHC15Q96MV8 337 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 CCDC43Q96MW1 224 aaKnown RBP17.69■□□□□ 0.42
TUBB3-209ENST00000555609 CAMKK2Q96RR4 588 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 TAF1DQ9H5J8 278 aaPredicted RBP17.69■□□□□ 0.42
TUBB3-209ENST00000555609 OLFML3Q9NRN5 406 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 PI4KBQ9UBF8 816 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 NAGPAQ9UK23 515 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 NFU1Q9UMS0 254 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 DIS3Q9Y2L1 958 aaKnown RBP17.69■□□□□ 0.42
TUBB3-209ENST00000555609 MYH4Q9Y623 1939 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 POTEFA5A3E0 1075 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 SPDYE3A6NKU9 549 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 POLRMTO00411 1230 aaKnown RBP17.69■□□□□ 0.42
TUBB3-209ENST00000555609 GRIN2DO15399 1336 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 UBE4BO95155 1302 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 POTEIP0CG38 1075 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 EEF2P13639 858 aaKnown RBP17.69■□□□□ 0.42
TUBB3-209ENST00000555609 ERCC3P19447 782 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 MUTP22033 750 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 JAM2P57087 298 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 ALKBH5Q6P6C2 394 aaKnown RBP17.69■□□□□ 0.42
TUBB3-209ENST00000555609 POTEGQ6S5H5 508 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 POTEEQ6S8J3 1075 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 UBR3Q6ZT12 1888 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 LRRC57Q8N9N7 239 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 CASKIN2Q8WXE0 1202 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 GJA10Q969M2 543 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 LRRC45Q96CN5 670 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 GMCL1Q96IK5 515 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 LRRC4BQ9NT99 713 aa17.69■□□□□ 0.42
TUBB3-209ENST00000555609 SUCLA2Q9P2R7 463 aaPredicted RBP17.69■□□□□ 0.42
TUBB3-209ENST00000555609 CERKLQ49MI3 558 aaPredicted RBP17.68■□□□□ 0.42
TUBB3-209ENST00000555609 TMEM179Q6ZVK1 233 aa17.68■□□□□ 0.42
TUBB3-209ENST00000555609 FBXO11Q86XK2 927 aa17.68■□□□□ 0.42
TUBB3-209ENST00000555609 SFR1Q86XK3 245 aa17.68■□□□□ 0.42
TUBB3-209ENST00000555609 BCAS4Q8TDM0 211 aa17.68■□□□□ 0.42
TUBB3-209ENST00000555609 ARL8AQ96BM9 186 aa17.68■□□□□ 0.42
TUBB3-209ENST00000555609 REEP2Q9BRK0 252 aa17.68■□□□□ 0.42
TUBB3-209ENST00000555609 MKNK1Q9BUB5 465 aa17.68■□□□□ 0.42
TUBB3-209ENST00000555609 IDI2Q9BXS1 227 aa17.68■□□□□ 0.42
TUBB3-209ENST00000555609 ZHX3Q9H4I2 956 aa17.68■□□□□ 0.42
TUBB3-209ENST00000555609 F8W031 263 aaPredicted RBP17.67■□□□□ 0.42
TUBB3-209ENST00000555609 RIMBP2O15034 1052 aa17.67■□□□□ 0.42
TUBB3-209ENST00000555609 PPP1R12BO60237 982 aaPredicted RBP17.67■□□□□ 0.42
TUBB3-209ENST00000555609 TBCAO75347 108 aaKnown RBP17.67■□□□□ 0.42
TUBB3-209ENST00000555609 NR3C1P04150 777 aa17.67■□□□□ 0.42
TUBB3-209ENST00000555609 H2AFZP0C0S5 128 aa17.67■□□□□ 0.42
TUBB3-209ENST00000555609 STAT3P40763 770 aa17.67■□□□□ 0.42
TUBB3-209ENST00000555609 ARID5AQ03989 594 aa17.67■□□□□ 0.42
TUBB3-209ENST00000555609 PRR16Q569H4 304 aa17.67■□□□□ 0.42
TUBB3-209ENST00000555609 TATDN1Q6P1N9 297 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms