RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 CACNA1AO00555 2505 aa12.42□□□□□ -0.42
TDP1-212ENST00000555565 RIF1Q5UIP0 2472 aaKnown RBP12.42□□□□□ -0.42
TDP1-212ENST00000555565 NOP56O00567 594 aaKnown RBP12.41□□□□□ -0.42
TDP1-212ENST00000555565 RBM10P98175 930 aaKnown RBP12.41□□□□□ -0.42
TDP1-212ENST00000555565 EXOSC10Q01780 885 aaKnown RBP12.41□□□□□ -0.42
TDP1-212ENST00000555565 MGAT3Q09327 533 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 DNAH14Q0VDD8 3507 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 LPIN1Q14693 890 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 RNF20Q5VTR2 975 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 APOA5Q6Q788 366 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 RTN4RL1Q86UN2 441 aaPredicted RBP12.41□□□□□ -0.42
TDP1-212ENST00000555565 MICU3Q86XE3 530 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 RASEFQ8IZ41 740 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 VN1R2Q8NFZ6 395 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 KAT6AQ92794 2004 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 TCEANC2Q96MN5 208 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 NEK1Q96PY6 1258 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 GPR20Q99678 358 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 USP26Q9BXU7 913 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 IRF2BPLQ9H1B7 796 aa12.41□□□□□ -0.42
TDP1-212ENST00000555565 BARX2Q9UMQ3 279 aaPredicted RBP12.41□□□□□ -0.42
TDP1-212ENST00000555565 MRPL42Q9Y6G3 142 aaKnown RBP12.41□□□□□ -0.42
TDP1-212ENST00000555565 NUBP1P53384 320 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 BTG3Q14201 252 aaPredicted RBP12.4□□□□□ -0.42
TDP1-212ENST00000555565 UBE2SQ16763 222 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 ADCK5Q3MIX3 580 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 TSGA10IPQ3SY00 556 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 NAALADL2Q58DX5 795 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 TRIM50Q86XT4 487 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 KLHL23Q8NBE8 558 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 ATP8B4Q8TF62 1192 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 LMBR1Q8WVP7 490 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 LINC01599Q8WXQ3 324 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 RPGRIP1Q96KN7 1286 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 SENP7Q9BQF6 1050 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 BRPF3Q9ULD4 1205 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 PCDHGC5Q9Y5F6 944 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 TTC3P53804 2025 aa12.4□□□□□ -0.42
TDP1-212ENST00000555565 PRR23AA6NEV1 266 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 GALR2O43603 387 aaPredicted RBP12.39□□□□□ -0.43
TDP1-212ENST00000555565 ATP9AO75110 1047 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 CDC45O75419 566 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 GHRP10912 638 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 ATF7P17544 494 aaPredicted RBP12.39□□□□□ -0.43
TDP1-212ENST00000555565 ITGB5P18084 799 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 NBL1P41271 181 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 NRIP1P48552 1158 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 SP4Q02446 784 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 FUT2Q10981 343 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 KCNC3Q14003 757 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 PTPN21Q16825 1174 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 RUFY4Q6ZNE9 571 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 DHX32Q7L7V1 743 aaKnown RBP12.39□□□□□ -0.43
TDP1-212ENST00000555565 ERMP1Q7Z2K6 904 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 HEATR3Q7Z4Q2 680 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 RBM23Q86U06 439 aaKnown RBP12.39□□□□□ -0.43
TDP1-212ENST00000555565 NLRX1Q86UT6 975 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 POF1BQ8WVV4 589 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 GPRASP2Q96D09 838 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 RIPOR3Q96MK2 946 aa12.39□□□□□ -0.43
TDP1-212ENST00000555565 CNTNAP5Q8WYK1 1306 aa12.38□□□□□ -0.43
TDP1-212ENST00000555565 GNAT1P11488 350 aa12.38□□□□□ -0.43
TDP1-212ENST00000555565 KCNA2P16389 499 aa12.38□□□□□ -0.43
TDP1-212ENST00000555565 UTP14CQ5TAP6 766 aaKnown RBP12.38□□□□□ -0.43
TDP1-212ENST00000555565 WWC2Q6AWC2 1192 aa12.38□□□□□ -0.43
TDP1-212ENST00000555565 TYW1BQ6NUM6 668 aa12.38□□□□□ -0.43
TDP1-212ENST00000555565 SYNE3Q6ZMZ3 975 aa12.38□□□□□ -0.43
TDP1-212ENST00000555565 GIMAP8Q8ND71 665 aaPredicted RBP12.38□□□□□ -0.43
TDP1-212ENST00000555565 S1PR5Q9H228 398 aa12.38□□□□□ -0.43
TDP1-212ENST00000555565 AGO3Q9H9G7 860 aaKnown RBP12.38□□□□□ -0.43
TDP1-212ENST00000555565 PCDHA6Q9UN73 950 aa12.38□□□□□ -0.43
TDP1-212ENST00000555565 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
TDP1-212ENST00000555565 PCDHA8Q9Y5H6 950 aa12.38□□□□□ -0.43
TDP1-212ENST00000555565 UBIAD1Q9Y5Z9 338 aa12.38□□□□□ -0.43
TDP1-212ENST00000555565 FAM186AA6NE01 2351 aa12.38□□□□□ -0.43
TDP1-212ENST00000555565 SPDYE3A6NKU9 549 aa12.37□□□□□ -0.43
TDP1-212ENST00000555565 PER2O15055 1255 aa12.37□□□□□ -0.43
TDP1-212ENST00000555565 ZBTB43O43298 467 aa12.37□□□□□ -0.43
TDP1-212ENST00000555565 TCF7P36402 384 aaPredicted RBP12.37□□□□□ -0.43
TDP1-212ENST00000555565 ARHGAP4P98171 946 aa12.37□□□□□ -0.43
TDP1-212ENST00000555565 FBXO47Q5MNV8 452 aa12.37□□□□□ -0.43
TDP1-212ENST00000555565 MARCH8Q5T0T0 291 aa12.37□□□□□ -0.43
TDP1-212ENST00000555565 CMTR2Q8IYT2 770 aaKnown RBP12.37□□□□□ -0.43
TDP1-212ENST00000555565 TMEM105Q8N8V8 129 aa12.37□□□□□ -0.43
TDP1-212ENST00000555565 CDHR1Q96JP9 859 aa12.37□□□□□ -0.43
TDP1-212ENST00000555565 FAM217BQ9NTX9 383 aaPredicted RBP12.37□□□□□ -0.43
TDP1-212ENST00000555565 RBM28Q9NW13 759 aaKnown RBP12.37□□□□□ -0.43
TDP1-212ENST00000555565 ZNF215Q9UL58 517 aaPredicted RBP12.37□□□□□ -0.43
TDP1-212ENST00000555565 NRCAMQ92823 1304 aa12.37□□□□□ -0.43
TDP1-212ENST00000555565 GVINP1Q7Z2Y8 2422 aa12.36□□□□□ -0.43
TDP1-212ENST00000555565 GSTTP1A0A1W2PQM5 241 aa12.36□□□□□ -0.43
TDP1-212ENST00000555565 CDC27P30260 824 aa12.36□□□□□ -0.43
TDP1-212ENST00000555565 NAPAP54920 295 aa12.36□□□□□ -0.43
TDP1-212ENST00000555565 MTMR1Q13613 665 aa12.36□□□□□ -0.43
TDP1-212ENST00000555565 KRT32Q14532 448 aa12.36□□□□□ -0.43
TDP1-212ENST00000555565 RTN1Q16799 776 aa12.36□□□□□ -0.43
TDP1-212ENST00000555565 TMEM184AQ6ZMB5 413 aa12.36□□□□□ -0.43
TDP1-212ENST00000555565 PPP2R3CQ969Q6 453 aa12.36□□□□□ -0.43
TDP1-212ENST00000555565 JADE2Q9NQC1 790 aa12.36□□□□□ -0.43
TDP1-212ENST00000555565 PKD2L1Q9P0L9 805 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms