RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 STRIP1Q5VSL9 837 aa5.48□□□□□ -1.53
SRP54-207ENST00000555535 MBNL2Q5VZF2 373 aaKnown RBP5.48□□□□□ -1.53
SRP54-207ENST00000555535 RSPO2Q6UXX9 243 aaPredicted RBP5.48□□□□□ -1.53
SRP54-207ENST00000555535 KCTD1Q719H9 257 aa5.48□□□□□ -1.53
SRP54-207ENST00000555535 ADGRG3Q86Y34 549 aa5.48□□□□□ -1.53
SRP54-207ENST00000555535 TMEM145Q8NBT3 493 aa5.48□□□□□ -1.53
SRP54-207ENST00000555535 SHCBP1Q8NEM2 672 aa5.48□□□□□ -1.53
SRP54-207ENST00000555535 RASGRP4Q8TDF6 673 aa5.48□□□□□ -1.53
SRP54-207ENST00000555535 CPLX3Q8WVH0 158 aa5.48□□□□□ -1.53
SRP54-207ENST00000555535 DSEQ9UL01 958 aa5.48□□□□□ -1.53
SRP54-207ENST00000555535 TBX1O43435 398 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 KCNQ1P51787 676 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 SLC25A3Q00325 362 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 FANCCQ00597 558 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 PAK2Q13177 524 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 COLEC12Q5KU26 742 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 SLC35F1Q5T1Q4 408 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 SPTY2D1Q68D10 685 aaPredicted RBP5.47□□□□□ -1.53
SRP54-207ENST00000555535 DENND5AQ6IQ26 1287 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 MRGPREQ86SM8 312 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 RBM12BQ8IXT5 1001 aaKnown RBP5.47□□□□□ -1.53
SRP54-207ENST00000555535 ZNF654Q8IZM8 581 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 LENG9Q96B70 501 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 C1orf159Q96HA4 380 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 LGR4Q9BXB1 951 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 KIAA1683Q9H0B3 1180 aa5.47□□□□□ -1.53
SRP54-207ENST00000555535 PROB1E7EW31 1015 aa5.46□□□□□ -1.54
SRP54-207ENST00000555535 LTFP02788 710 aa5.46□□□□□ -1.54
SRP54-207ENST00000555535 PDE6AP16499 860 aa5.46□□□□□ -1.54
SRP54-207ENST00000555535 GJA4P35212 333 aa5.46□□□□□ -1.54
SRP54-207ENST00000555535 MAP4K2Q12851 820 aa5.46□□□□□ -1.54
SRP54-207ENST00000555535 PCOLCEQ15113 449 aa5.46□□□□□ -1.54
SRP54-207ENST00000555535 SF1Q15637 639 aaKnown RBP5.46□□□□□ -1.54
SRP54-207ENST00000555535 HABP4Q5JVS0 413 aaKnown RBP5.46□□□□□ -1.54
SRP54-207ENST00000555535 TRIM68Q6AZZ1 485 aa5.46□□□□□ -1.54
SRP54-207ENST00000555535 SYNE4Q8N205 404 aa5.46□□□□□ -1.54
SRP54-207ENST00000555535 GPR150Q8NGU9 434 aa5.46□□□□□ -1.54
SRP54-207ENST00000555535 NTN5Q8WTR8 489 aaPredicted RBP5.46□□□□□ -1.54
SRP54-207ENST00000555535 MIEF2Q96C03 454 aa5.46□□□□□ -1.54
SRP54-207ENST00000555535 SLC39A2Q9NP94 309 aa5.46□□□□□ -1.54
SRP54-207ENST00000555535 ARHGAP28Q9P2N2 729 aa5.46□□□□□ -1.54
SRP54-207ENST00000555535 ACOT7O00154 380 aa5.45□□□□□ -1.54
SRP54-207ENST00000555535 GRK2P25098 689 aa5.45□□□□□ -1.54
SRP54-207ENST00000555535 GRK3P35626 688 aa5.45□□□□□ -1.54
SRP54-207ENST00000555535 MAN2A2P49641 1150 aa5.45□□□□□ -1.54
SRP54-207ENST00000555535 RACK1P63244 317 aaKnown RBP5.45□□□□□ -1.54
SRP54-207ENST00000555535 KIZQ2M2Z5 673 aa5.45□□□□□ -1.54
SRP54-207ENST00000555535 LARP4Q71RC2 724 aaKnown RBP eCLIP5.45□□□□□ -1.54
SRP54-207ENST00000555535 RTKN2Q8IZC4 609 aa5.45□□□□□ -1.54
SRP54-207ENST00000555535 SLC25A43Q8WUT9 341 aaPredicted RBP5.45□□□□□ -1.54
SRP54-207ENST00000555535 KCTD13Q8WZ19 329 aa5.45□□□□□ -1.54
SRP54-207ENST00000555535 GPRASP2Q96D09 838 aa5.45□□□□□ -1.54
SRP54-207ENST00000555535 TMEM176AQ96HP8 235 aa5.45□□□□□ -1.54
SRP54-207ENST00000555535 BBC3Q96PG8 261 aaPredicted RBP5.45□□□□□ -1.54
SRP54-207ENST00000555535 HECAQ9UBI9 543 aaPredicted RBP5.45□□□□□ -1.54
SRP54-207ENST00000555535 TELO2Q9Y4R8 837 aa5.45□□□□□ -1.54
SRP54-207ENST00000555535 RPS6KA4O75676 772 aa5.44□□□□□ -1.54
SRP54-207ENST00000555535 RGS19P49795 217 aa5.44□□□□□ -1.54
SRP54-207ENST00000555535 MRE11P49959 708 aa5.44□□□□□ -1.54
SRP54-207ENST00000555535 HGFACQ04756 655 aa5.44□□□□□ -1.54
SRP54-207ENST00000555535 TOB2Q14106 344 aaPredicted RBP5.44□□□□□ -1.54
SRP54-207ENST00000555535 ZNF362Q5T0B9 420 aaPredicted RBP5.44□□□□□ -1.54
SRP54-207ENST00000555535 STRIP2Q9ULQ0 834 aa5.44□□□□□ -1.54
SRP54-207ENST00000555535 PTPAQ15257 358 aa5.43□□□□□ -1.54
SRP54-207ENST00000555535 LY6G5CQ5SRR4 150 aa5.43□□□□□ -1.54
SRP54-207ENST00000555535 PAPD7Q5XG87 772 aaKnown RBP5.43□□□□□ -1.54
SRP54-207ENST00000555535 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.43□□□□□ -1.54
SRP54-207ENST00000555535 OTOP2Q7RTS6 562 aa5.43□□□□□ -1.54
SRP54-207ENST00000555535 GSPT2Q8IYD1 628 aaKnown RBP5.43□□□□□ -1.54
SRP54-207ENST00000555535 NLGN4XQ8N0W4 816 aa5.43□□□□□ -1.54
SRP54-207ENST00000555535 WDR48Q8TAF3 677 aa5.43□□□□□ -1.54
SRP54-207ENST00000555535 COL6A2P12110 1019 aa5.42□□□□□ -1.54
SRP54-207ENST00000555535 ZNF37AP17032 561 aaPredicted RBP5.42□□□□□ -1.54
SRP54-207ENST00000555535 SCNN1GP51170 649 aa5.42□□□□□ -1.54
SRP54-207ENST00000555535 STILQ15468 1287 aa5.42□□□□□ -1.54
SRP54-207ENST00000555535 RHOUQ7L0Q8 258 aa5.42□□□□□ -1.54
SRP54-207ENST00000555535 FILIP1Q7Z7B0 1213 aa5.42□□□□□ -1.54
SRP54-207ENST00000555535 LPPQ93052 612 aa5.42□□□□□ -1.54
SRP54-207ENST00000555535 WNK4Q96J92 1243 aa5.42□□□□□ -1.54
SRP54-207ENST00000555535 ZFYVE21Q9BQ24 234 aa5.42□□□□□ -1.54
SRP54-207ENST00000555535 TOR3AQ9H497 397 aa5.42□□□□□ -1.54
SRP54-207ENST00000555535 GALNT8Q9NY28 637 aa5.42□□□□□ -1.54
SRP54-207ENST00000555535 SH3BP1Q9Y3L3 701 aa5.42□□□□□ -1.54
SRP54-207ENST00000555535 A0A0G2JNJ9 132 aa5.41□□□□□ -1.54
SRP54-207ENST00000555535 NKRFO15226 690 aaKnown RBP eCLIP5.41□□□□□ -1.54
SRP54-207ENST00000555535 ZNF16P17020 682 aaPredicted RBP5.41□□□□□ -1.54
SRP54-207ENST00000555535 PTGS1P23219 599 aa5.41□□□□□ -1.54
SRP54-207ENST00000555535 ADCY8P40145 1251 aa5.41□□□□□ -1.54
SRP54-207ENST00000555535 IL13RA1P78552 427 aa5.41□□□□□ -1.54
SRP54-207ENST00000555535 TAP1Q03518 808 aa5.41□□□□□ -1.54
SRP54-207ENST00000555535 RIN1Q13671 783 aa5.41□□□□□ -1.54
SRP54-207ENST00000555535 LBX2Q6XYB7 198 aa5.41□□□□□ -1.54
SRP54-207ENST00000555535 OR14K1Q8NGZ2 314 aa5.41□□□□□ -1.54
SRP54-207ENST00000555535 RABGGTAQ92696 567 aa5.41□□□□□ -1.54
SRP54-207ENST00000555535 PHF20Q9BVI0 1012 aa5.41□□□□□ -1.54
SRP54-207ENST00000555535 BACH2Q9BYV9 841 aa5.41□□□□□ -1.54
SRP54-207ENST00000555535 INCENPQ9NQS7 918 aa5.41□□□□□ -1.54
SRP54-207ENST00000555535 PPARGC1AQ9UBK2 798 aaKnown RBP5.41□□□□□ -1.54
SRP54-207ENST00000555535 Q9UFV3 132 aa5.41□□□□□ -1.54
SRP54-207ENST00000555535 COX11Q9Y6N1 276 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms