RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 GTF2IRD1Q9UHL9 959 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 CEP131Q9UPN4 1083 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 POTEB3A0JP26 581 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 SLC37A4O43826 429 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 B4GALT4O60513 344 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 CCNE2O96020 404 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 TIMP1P01033 207 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 SYT1P21579 422 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 PTK7Q13308 1070 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 PPP2R5CQ13362 524 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 ZNF174Q15697 407 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 TMEM266Q2M3C6 531 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 POTEBQ6S5H4 581 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 RSPH3Q86UC2 560 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 EXOC8Q8IYI6 725 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 TMEM199Q8N511 208 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 CAGE1Q8TC20 777 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 BBXQ8WY36 941 aaPredicted RBP11.92□□□□□ -0.5
TMEM260-206ENST00000555046 TRPV6Q9H1D0 765 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 TTC12Q9H892 705 aaPredicted RBP11.92□□□□□ -0.5
TMEM260-206ENST00000555046 THEGQ9P2T0 379 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 DAXXQ9UER7 740 aaPredicted RBP11.92□□□□□ -0.5
TMEM260-206ENST00000555046 TRPC6Q9Y210 931 aa11.92□□□□□ -0.5
TMEM260-206ENST00000555046 MAFBQ9Y5Q3 323 aaPredicted RBP11.92□□□□□ -0.5
TMEM260-206ENST00000555046 CHD9Q3L8U1 2897 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 C5orf42Q9H799 3197 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 VPS37CA5D8V6 355 aaPredicted RBP11.91□□□□□ -0.5
TMEM260-206ENST00000555046 STX6O43752 255 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 P4HBP07237 508 aaKnown RBP11.91□□□□□ -0.5
TMEM260-206ENST00000555046 OR52Z1P0C646 297 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 SMIM10L2AP0DMW4 78 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 SMIM10L2BP0DMW5 78 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 TXKP42681 527 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 PSMC5P62195 406 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 PPFIA1Q13136 1202 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 PDIA5Q14554 519 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 EPHA7Q15375 998 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 ZNF484Q5JVG2 852 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 TAF2Q6P1X5 1199 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 OTUD6AQ7L8S5 288 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 RPUSD2Q8IZ73 545 aaKnown RBP11.91□□□□□ -0.5
TMEM260-206ENST00000555046 ZNF710Q8N1W2 664 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 ERMNQ8TAM6 284 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 ATP8B4Q8TF62 1192 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 HAS1Q92839 578 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 MTMR9Q96QG7 549 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 HIPK3Q9H422 1215 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 RNPEPQ9H4A4 650 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 PDLIM7Q9NR12 457 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 TRMT13Q9NUP7 481 aaKnown RBP11.91□□□□□ -0.5
TMEM260-206ENST00000555046 GABBR1Q9UBS5 961 aa11.91□□□□□ -0.5
TMEM260-206ENST00000555046 BAHCC1Q9P281 2608 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 FAM205CA6NFA0 338 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 PITPNM1O00562 1244 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 MAGEB2O15479 319 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 CHMP2AO43633 222 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 CAND2O75155 1236 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 MARK3P27448 753 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 QARSP47897 775 aaKnown RBP11.9□□□□□ -0.5
TMEM260-206ENST00000555046 GDF6Q6KF10 455 aaPredicted RBP11.9□□□□□ -0.5
TMEM260-206ENST00000555046 MFSD5Q6N075 450 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 FAM43BQ6ZT52 329 aaPredicted RBP11.9□□□□□ -0.5
TMEM260-206ENST00000555046 NME8Q8N427 588 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 NEK9Q8TD19 979 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 UIMC1Q96RL1 719 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 PCYT2Q99447 389 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 UNC45AQ9H3U1 944 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 ZSWIM4Q9H7M6 989 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 FOXD4L1Q9NU39 408 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 SETD4Q9NVD3 440 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 TBX21Q9UL17 535 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 PPME1Q9Y570 386 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 MCM3APO60318 1980 aa11.9□□□□□ -0.5
TMEM260-206ENST00000555046 TRIM43BA6NCK2 446 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 KIF28PB7ZC32 967 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 INSRRP14616 1297 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 TMOD1P28289 359 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 HOXC8P31273 242 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 RFC2P35250 354 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 PRPHP41219 470 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 CDC42EP1Q00587 391 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 PTGDRQ13258 359 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 PPIGQ13427 754 aaKnown RBP eCLIP11.89□□□□□ -0.51
TMEM260-206ENST00000555046 PLCB4Q15147 1175 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 GRIK4Q16099 956 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 XKR3Q5GH77 459 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 TMEM31Q5JXX7 168 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 ARL6IP4Q66PJ3 421 aaKnown RBP11.89□□□□□ -0.51
TMEM260-206ENST00000555046 B3GNT9Q6UX72 402 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 DTHD1Q6ZMT9 781 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 SERINC5Q86VE9 423 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 TRIM50Q86XT4 487 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 TRIM43Q96BQ3 446 aaPredicted RBP11.89□□□□□ -0.51
TMEM260-206ENST00000555046 JPH2Q9BR39 696 aaPredicted RBP11.89□□□□□ -0.51
TMEM260-206ENST00000555046 EPHX3Q9H6B9 360 aa11.89□□□□□ -0.51
TMEM260-206ENST00000555046 CHD7Q9P2D1 2997 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 PFKMP08237 780 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 CYP2C9P11712 490 aa11.88□□□□□ -0.51
TMEM260-206ENST00000555046 XRCC6P12956 609 aaKnown RBP eCLIP11.88□□□□□ -0.51
TMEM260-206ENST00000555046 MUTP22033 750 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms