RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 GABPAQ06546 454 aa18.14■□□□□ 0.49
XRCC3-209ENST00000554913 ZNF844Q08AG5 666 aa18.14■□□□□ 0.49
XRCC3-209ENST00000554913 CUL1Q13616 776 aa18.14■□□□□ 0.49
XRCC3-209ENST00000554913 C10orf76Q5T2E6 689 aa18.14■□□□□ 0.49
XRCC3-209ENST00000554913 RC3H1Q5TC82 1133 aaKnown RBP18.14■□□□□ 0.49
XRCC3-209ENST00000554913 LRIG3Q6UXM1 1119 aa18.14■□□□□ 0.49
XRCC3-209ENST00000554913 C15orf52Q6ZUT6 534 aaKnown RBP18.14■□□□□ 0.49
XRCC3-209ENST00000554913 TPCN2Q8NHX9 752 aa18.14■□□□□ 0.49
XRCC3-209ENST00000554913 FRMD3A2A2Y4 597 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 PGRMC1O00264 195 aaKnown RBP18.13■□□□□ 0.49
XRCC3-209ENST00000554913 CTNNA1P35221 906 aaKnown RBP18.13■□□□□ 0.49
XRCC3-209ENST00000554913 HOXD13P35453 343 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 PSMC6P62333 389 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 IFT88Q13099 833 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 EXOC3L4Q17RC7 722 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 MICALCLQ6ZW33 695 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.13■□□□□ 0.49
XRCC3-209ENST00000554913 FAM163AQ96GL9 167 aaPredicted RBP18.13■□□□□ 0.49
XRCC3-209ENST00000554913 DHX36Q9H2U1 1008 aaKnown RBP18.13■□□□□ 0.49
XRCC3-209ENST00000554913 AMACRQ9UHK6 382 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 ATF5Q9Y2D1 282 aaPredicted RBP18.13■□□□□ 0.49
XRCC3-209ENST00000554913 RTCBQ9Y3I0 505 aaKnown RBP18.13■□□□□ 0.49
XRCC3-209ENST00000554913 PLIN4Q96Q06 1357 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 BTAF1O14981 1849 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 GAKO14976 1311 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 MEIS1O00470 390 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 TTLL1O95922 423 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 AFPP02771 609 aaKnown RBP18.13■□□□□ 0.49
XRCC3-209ENST00000554913 DCAF17Q5H9S7 520 aaPredicted RBP18.13■□□□□ 0.49
XRCC3-209ENST00000554913 PPP4R3CPQ6ZMV5 832 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 EIF1ADQ8N9N8 165 aaKnown RBP18.13■□□□□ 0.49
XRCC3-209ENST00000554913 CEP89Q96ST8 783 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.13■□□□□ 0.491e-6■■■■□ 26
XRCC3-209ENST00000554913 BCCIPQ9P287 314 aaKnown RBP eCLIP18.13■□□□□ 0.49
XRCC3-209ENST00000554913 FBXL5Q9UKA1 691 aa18.13■□□□□ 0.49
XRCC3-209ENST00000554913 NHSQ6T4R5 1651 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 KRIT1O00522 736 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 ZBTB5O15062 677 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 DAPK3O43293 454 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 IL1R1P14778 569 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 TMOD1P28289 359 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 HSPA1LP34931 641 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 RFC4P35249 363 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 SWT1Q5T5J6 900 aaKnown RBP18.12■□□□□ 0.49
XRCC3-209ENST00000554913 GJB7Q6PEY0 223 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 UBLCP1Q8WVY7 318 aaPredicted RBP18.12■□□□□ 0.49
XRCC3-209ENST00000554913 LRRC45Q96CN5 670 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 DAGLAQ9Y4D2 1042 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 BHMG1C9JSJ3 638 aaPredicted RBP18.12■□□□□ 0.49
XRCC3-209ENST00000554913 IFI16Q16666 785 aaKnown RBP18.12■□□□□ 0.49
XRCC3-209ENST00000554913 PEX26Q7Z412 305 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 FRMD5Q7Z6J6 570 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 YTHDF3Q7Z739 585 aaKnown RBP18.12■□□□□ 0.49
XRCC3-209ENST00000554913 SFR1Q86XK3 245 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 BCAS3Q9H6U6 928 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 KCNMB3Q9NPA1 279 aa18.12■□□□□ 0.49
XRCC3-209ENST00000554913 BZW2Q9Y6E2 419 aaKnown RBP18.12■□□□□ 0.49
XRCC3-209ENST00000554913 ATAD5Q96QE3 1844 aa18.11■□□□□ 0.49
XRCC3-209ENST00000554913 AKAP3O75969 853 aa18.11■□□□□ 0.49
XRCC3-209ENST00000554913 SLURP2P0DP57 97 aa18.11■□□□□ 0.49
XRCC3-209ENST00000554913 PABPC4Q13310 644 aaKnown RBP eCLIP18.11■□□□□ 0.493e-7■■■■■ 28.7
XRCC3-209ENST00000554913 GIT2Q14161 759 aa18.11■□□□□ 0.49
XRCC3-209ENST00000554913 KNOP1Q1ED39 458 aaKnown RBP18.11■□□□□ 0.49
XRCC3-209ENST00000554913 TCERG1LQ5VWI1 586 aa18.11■□□□□ 0.49
XRCC3-209ENST00000554913 CYFIP2Q96F07 1278 aa18.11■□□□□ 0.49
XRCC3-209ENST00000554913 CALR3Q96L12 384 aaKnown RBP18.11■□□□□ 0.49
XRCC3-209ENST00000554913 DDX4Q9NQI0 724 aaKnown RBP18.11■□□□□ 0.49
XRCC3-209ENST00000554913 SLC12A6Q9UHW9 1150 aa18.11■□□□□ 0.49
XRCC3-209ENST00000554913 TRAF3IP3Q9Y228 551 aa18.11■□□□□ 0.49
XRCC3-209ENST00000554913 XRCC5P13010 732 aaKnown RBP18.11■□□□□ 0.49
XRCC3-209ENST00000554913 CASP4P49662 377 aa18.11■□□□□ 0.49
XRCC3-209ENST00000554913 CATSPER3Q86XQ3 398 aa18.11■□□□□ 0.49
XRCC3-209ENST00000554913 ARFGAP2Q8N6H7 521 aa18.11■□□□□ 0.49
XRCC3-209ENST00000554913 CELF4Q9BZC1 486 aaKnown RBP18.11■□□□□ 0.49
XRCC3-209ENST00000554913 CNOT8Q9UFF9 292 aaKnown RBP18.11■□□□□ 0.49
XRCC3-209ENST00000554913 THSD7AQ9UPZ6 1657 aa18.11■□□□□ 0.49
XRCC3-209ENST00000554913 SPATA31A6Q5VVP1 1343 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 PITPNM2Q9BZ72 1349 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 BACH1O14867 736 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 TTI1O43156 1089 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 FLOT1O75955 427 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 PRKCIP41743 596 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 EPHA7Q15375 998 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 C6orf89Q6UWU4 347 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 CABS1Q96KC9 395 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 REEP2Q9BRK0 252 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 YY1AP1Q9H869 796 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 LRRC4CQ9HCJ2 640 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 SIX2Q9NPC8 291 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 NENFQ9UMX5 172 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 STXBP5LQ9Y2K9 1186 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 FAM170AA1A519 330 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 DCDC2CA8MYV0 355 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 DDX3XO00571 662 aaKnown RBP eCLIP18.1■□□□□ 0.49
XRCC3-209ENST00000554913 H2AFZP0C0S5 128 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 H2AFVQ71UI9 128 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 SLFN11Q7Z7L1 901 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 DAAM2Q86T65 1068 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 SLF2Q8IX21 1173 aa18.1■□□□□ 0.49
XRCC3-209ENST00000554913 CNBD1Q8NA66 436 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms