RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MFSD10Q14728 455 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 UGCGQ16739 394 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 TNS4Q8IZW8 715 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 EPSTI1Q96J88 318 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 NACC1Q96RE7 527 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 PYM1Q9BRP8 204 aaKnown RBP18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 FAM13BQ9NYF5 915 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 PPME1Q9Y570 386 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 POTEB3A0JP26 581 aa18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 GOLGA6L22H0YM25 854 aa18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 OATP04181 439 aa18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 COL6A1P12109 1028 aa18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 ATP4AP20648 1035 aa18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 PTPN11Q06124 597 aaPredicted RBP18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 PLCB4Q15147 1175 aa18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 KIAA0753Q2KHM9 967 aa18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 NFRKBQ6P4R8 1299 aa18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 POTEBQ6S5H4 581 aa18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 OTUD6AQ7L8S5 288 aa18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 SESTD1Q86VW0 696 aa18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 CKAP2LQ8IYA6 745 aa18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 STARD7Q9NQZ5 370 aa18.39■□□□□ 0.54
SPTLC2-203ENST00000554901 SCN10AQ9Y5Y9 1956 aa18.39■□□□□ 0.53
SPTLC2-203ENST00000554901 FAM237AA0A1B0GTK4 181 aa18.39■□□□□ 0.53
SPTLC2-203ENST00000554901 TMEM119Q4V9L6 283 aa18.39■□□□□ 0.53
SPTLC2-203ENST00000554901 SPECC1Q5M775 1068 aa18.39■□□□□ 0.53
SPTLC2-203ENST00000554901 CCDC73Q6ZRK6 1079 aa18.39■□□□□ 0.53
SPTLC2-203ENST00000554901 RASSF8Q8NHQ8 419 aa18.39■□□□□ 0.53
SPTLC2-203ENST00000554901 NIFKQ9BYG3 293 aaKnown RBP18.39■□□□□ 0.53
SPTLC2-203ENST00000554901 RNPEPQ9H4A4 650 aa18.39■□□□□ 0.53
SPTLC2-203ENST00000554901 ANKEF1Q9NU02 776 aa18.39■□□□□ 0.53
SPTLC2-203ENST00000554901 WRAP73Q9P2S5 460 aaPredicted RBP18.39■□□□□ 0.53
SPTLC2-203ENST00000554901 COL1A2P08123 1366 aa18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 A0A0U1RQG5 324 aaPredicted RBP18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 STBD1O95210 358 aa18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 YWHABP31946 246 aaKnown RBP18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 GRB10Q13322 594 aa18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 ZNF484Q5JVG2 852 aa18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 USP49Q70CQ1 688 aa18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 MRPS27Q92552 414 aaKnown RBP18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 DDX19AQ9NUU7 478 aaKnown RBP18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 STK17AQ9UEE5 414 aa18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 DBR1Q9UK59 544 aaKnown RBP18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 KIAA1024Q9UPX6 916 aa18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 DNM3Q9UQ16 869 aa18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 TRPC6Q9Y210 931 aa18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 NRCAMQ92823 1304 aa18.38■□□□□ 0.53
SPTLC2-203ENST00000554901 MYH9P35579 1960 aaKnown RBP18.37■□□□□ 0.53
SPTLC2-203ENST00000554901 RRN3P2A6NIE6 340 aa18.37■□□□□ 0.53
SPTLC2-203ENST00000554901 MARK3P27448 753 aa18.37■□□□□ 0.53
SPTLC2-203ENST00000554901 ITGA7Q13683 1181 aa18.37■□□□□ 0.53
SPTLC2-203ENST00000554901 KARSQ15046 597 aaKnown RBP18.37■□□□□ 0.53
SPTLC2-203ENST00000554901 NBPF20Q3BBV1 942 aa18.37■□□□□ 0.53
SPTLC2-203ENST00000554901 C1orf53Q5VUE5 145 aa18.37■□□□□ 0.53
SPTLC2-203ENST00000554901 POTEGQ6S5H5 508 aa18.37■□□□□ 0.53
SPTLC2-203ENST00000554901 NECAB2Q7Z6G3 386 aa18.37■□□□□ 0.53
SPTLC2-203ENST00000554901 C7orf31Q8N865 590 aa18.37■□□□□ 0.53
SPTLC2-203ENST00000554901 SLC43A3Q8NBI5 491 aa18.37■□□□□ 0.53
SPTLC2-203ENST00000554901 VTI1AQ96AJ9 217 aa18.37■□□□□ 0.53
SPTLC2-203ENST00000554901 PNMA5Q96PV4 448 aa18.37■□□□□ 0.53
SPTLC2-203ENST00000554901 WDR81Q562E7 1941 aa18.36■□□□□ 0.53
SPTLC2-203ENST00000554901 GNAT1P11488 350 aa18.36■□□□□ 0.53
SPTLC2-203ENST00000554901 HOXC8P31273 242 aa18.36■□□□□ 0.53
SPTLC2-203ENST00000554901 UBE2HP62256 183 aa18.36■□□□□ 0.53
SPTLC2-203ENST00000554901 ECM1Q16610 540 aa18.36■□□□□ 0.53
SPTLC2-203ENST00000554901 ANO5Q75V66 913 aa18.36■□□□□ 0.53
SPTLC2-203ENST00000554901 UBE2Q1Q7Z7E8 422 aa18.36■□□□□ 0.53
SPTLC2-203ENST00000554901 EXOC8Q8IYI6 725 aa18.36■□□□□ 0.53
SPTLC2-203ENST00000554901 CUEDC2Q9H467 287 aa18.36■□□□□ 0.53
SPTLC2-203ENST00000554901 C11orf49Q9H6J7 331 aa18.36■□□□□ 0.53
SPTLC2-203ENST00000554901 KCNH3Q9ULD8 1083 aa18.36■□□□□ 0.53
SPTLC2-203ENST00000554901 HPSEQ9Y251 543 aa18.36■□□□□ 0.53
SPTLC2-203ENST00000554901 DDX11L8A8MPP1 907 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 EYA4O95677 639 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 SMIM10L2AP0DMW4 78 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 SMIM10L2BP0DMW5 78 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 PLCG1P19174 1290 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 EN2P19622 333 aaPredicted RBP18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 PSMC6P62333 389 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 PPFIA1Q13136 1202 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 TARBP2Q15633 366 aaKnown RBP18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 ZRSR1Q15695 479 aaKnown RBP18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 RRAGBQ5VZM2 374 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 IQUBQ8NA54 791 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 SENP6Q9GZR1 1112 aaPredicted RBP18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 CYP26B1Q9NR63 512 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 SEPT9Q9UHD8 586 aaPredicted RBP18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 GTF2IRD1Q9UHL9 959 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 USP25Q9UHP3 1055 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 GRIN2DO15399 1336 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 BRCA2P51587 3418 aa18.35■□□□□ 0.53
SPTLC2-203ENST00000554901 ARVCFO00192 962 aa18.34■□□□□ 0.53
SPTLC2-203ENST00000554901 INSRRP14616 1297 aa18.34■□□□□ 0.53
SPTLC2-203ENST00000554901 PFKFB1P16118 471 aa18.34■□□□□ 0.53
SPTLC2-203ENST00000554901 RARRES1P49788 294 aa18.34■□□□□ 0.53
SPTLC2-203ENST00000554901 SNX17Q15036 470 aa18.34■□□□□ 0.53
SPTLC2-203ENST00000554901 FSIP1Q8NA03 581 aa18.34■□□□□ 0.53
SPTLC2-203ENST00000554901 PAWRQ96IZ0 340 aaKnown RBP18.34■□□□□ 0.53
SPTLC2-203ENST00000554901 CCDC43Q96MW1 224 aaKnown RBP18.34■□□□□ 0.53
SPTLC2-203ENST00000554901 MROH7Q68CQ1 1323 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms