RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 TTI1O43156 1089 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 UCHL3P15374 230 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 COG2Q14746 738 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 SLC18A3Q16572 532 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 HS2ST1Q7LGA3 356 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 CATSPER3Q86XQ3 398 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 TBC1D22AQ8WUA7 517 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 CCDC127Q96BQ5 260 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 DHX36Q9H2U1 1008 aaKnown RBP12.95□□□□□ -0.34
XRCC3-208ENST00000554811 OSGEPQ9NPF4 335 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 ITGB4P16144 1822 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 GH2P01242 217 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 TNFAIP3P21580 790 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 MAGEA9P43362 315 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 PLTPP55058 493 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 GBP6Q6ZN66 633 aa12.95□□□□□ -0.34
XRCC3-208ENST00000554811 ZNF571Q7Z3V5 609 aaPredicted RBP12.95□□□□□ -0.34
XRCC3-208ENST00000554811 MRRFQ96E11 262 aaKnown RBP12.95□□□□□ -0.34
XRCC3-208ENST00000554811 TDRD3Q9H7E2 651 aaKnown RBP12.95□□□□□ -0.34
XRCC3-208ENST00000554811 NR3C1P04150 777 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 STAT1P42224 750 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 EMBQ6PCB8 327 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 AENQ8WTP8 325 aaKnown RBP12.94□□□□□ -0.34
XRCC3-208ENST00000554811 KDM3AQ9Y4C1 1321 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 UTRNP46939 3433 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 GRID2IPA4D2P6 1211 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 GOLGA8IPA6NC78 632 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 GOLGA8JA6NMD2 632 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 SART1O43290 800 aaKnown RBP12.94□□□□□ -0.34
XRCC3-208ENST00000554811 FECHP22830 423 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 PPP4CP60510 307 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 ODR4Q5SWX8 454 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 CDC42EP5Q6NZY7 148 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 TADA2BQ86TJ2 420 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 FAM186BQ8IYM0 893 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 DYDC1Q8WWB3 177 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 HOOK2Q96ED9 719 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 SCLT1Q96NL6 688 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 NOC2LQ9Y3T9 749 aaKnown RBP12.94□□□□□ -0.34
XRCC3-208ENST00000554811 MYO1FO00160 1098 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 ATMINO43313 823 aaPredicted RBP12.94□□□□□ -0.34
XRCC3-208ENST00000554811 CALUO43852 315 aaPredicted RBP12.94□□□□□ -0.34
XRCC3-208ENST00000554811 AKAP3O75969 853 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
XRCC3-208ENST00000554811 NSMFQ6X4W1 530 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 MIGA2Q7L4E1 593 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 MMGT1Q8N4V1 131 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 DNAJC19Q96DA6 116 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 CCDC114Q96M63 670 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 RUSC1Q9BVN2 902 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 VIPAS39Q9H9C1 493 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 MLXIPLQ9NP71 852 aa12.94□□□□□ -0.34
XRCC3-208ENST00000554811 A0A1W2PQJ5 194 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 RPL13P26373 211 aaKnown RBP12.93□□□□□ -0.34
XRCC3-208ENST00000554811 CDR1P51861 262 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 IRX3P78415 501 aaPredicted RBP12.93□□□□□ -0.34
XRCC3-208ENST00000554811 MESDQ14696 234 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 FAM178BQ8IXR5 827 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 RIOX1Q9H6W3 641 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 FBXL5Q9UKA1 691 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 SNX24Q9Y343 169 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 F5H6K3 240 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 TULP2O00295 520 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 KLRC3Q07444 240 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 GPATCH4Q5T3I0 446 aaKnown RBP12.93□□□□□ -0.34
XRCC3-208ENST00000554811 BANK1Q8NDB2 785 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 UBR2Q8IWV8 1755 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 PGRMC1O00264 195 aaKnown RBP12.93□□□□□ -0.34
XRCC3-208ENST00000554811 EIF3HO15372 352 aaKnown RBP eCLIP12.93□□□□□ -0.346e-6■■■■□ 25.8
XRCC3-208ENST00000554811 GAS7O60861 476 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 SSTR3P32745 418 aaPredicted RBP12.93□□□□□ -0.34
XRCC3-208ENST00000554811 KNOP1Q1ED39 458 aaKnown RBP12.93□□□□□ -0.34
XRCC3-208ENST00000554811 AADACL2Q6P093 401 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 CERS5Q8N5B7 392 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 GLG1Q92896 1179 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 AMNQ9BXJ7 453 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 GGT7Q9UJ14 662 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 FRMD4BQ9Y2L6 1034 aa12.93□□□□□ -0.34
XRCC3-208ENST00000554811 CTDP1Q9Y5B0 961 aaPredicted RBP12.93□□□□□ -0.34
XRCC3-208ENST00000554811 NOL4O94818 638 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 HDLBPQ00341 1268 aaKnown RBP12.92□□□□□ -0.34
XRCC3-208ENST00000554811 IFI16Q16666 785 aaKnown RBP12.92□□□□□ -0.34
XRCC3-208ENST00000554811 LRCH2Q5VUJ6 765 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 HGSNATQ68CP4 663 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 MDM1Q8TC05 714 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 ANKS1AQ92625 1134 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 DYDC2Q96IM9 177 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 AMFRQ9UKV5 643 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 DDTLA6NHG4 134 aaPredicted RBP12.92□□□□□ -0.34
XRCC3-208ENST00000554811 KIF4AO95239 1232 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 PSMD2Q13200 908 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 SNX1Q13596 522 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 PDIA5Q14554 519 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 TRIP13Q15645 432 aaPredicted RBP12.92□□□□□ -0.34
XRCC3-208ENST00000554811 NAB2Q15742 525 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 ABCB5Q2M3G0 1257 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 CCDC38Q502W7 563 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 RBM26Q5T8P6 1007 aaKnown RBP12.92□□□□□ -0.34
XRCC3-208ENST00000554811 OTUD6AQ7L8S5 288 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 METTL13Q8N6R0 699 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms