RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ZNF571Q7Z3V5 609 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 PODNQ7Z5L7 613 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 KLHL7Q8IXQ5 586 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 SYT2Q8N9I0 419 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 MASTLQ96GX5 879 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 GOLGA6AQ9NYA3 693 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 RBAK-RBAKDNI3L0D1 243 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 GLI1P08151 1106 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 UCHL3P15374 230 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 ECE1P42892 770 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 GUCY2FP51841 1108 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 AOC3Q16853 763 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 LRRC31Q6UY01 552 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 KRT27Q7Z3Y8 459 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 NLGN1Q8N2Q7 840 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 EIF2AK1Q9BQI3 630 aaKnown RBP17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 EPB41L5Q9HCM4 733 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 NFU1Q9UMS0 254 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 RABGAP1Q9Y3P9 1069 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 SMCHD1A6NHR9 2005 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 LRRC37AA6NMS7 1700 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 PITPNM2Q9BZ72 1349 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 A0A1W2PRG0 241 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 FRMD3A2A2Y4 597 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 HEXIM1O94992 359 aaKnown RBP17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 NR3C1P04150 777 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 EDRF1Q3B7T1 1238 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 RBM26Q5T8P6 1007 aaKnown RBP17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 SYN2Q92777 582 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 CSRNP1Q96S65 589 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 RUFY1Q96T51 708 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 AJAP1Q9UKB5 411 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 GRID2IPA4D2P6 1211 aa17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 KCNK3O14649 394 aa17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 NMT1P30419 496 aaKnown RBP17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 CARSP49589 748 aaKnown RBP17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 MARSP56192 900 aaKnown RBP17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 ZC2HC1CQ53FD0 456 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 DACT2Q5SW24 774 aa17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 MBOAT7Q96N66 472 aa17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 OPLAHO14841 1288 aa17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 CALUO43852 315 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 ONECUT3O60422 494 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 PON1P27169 355 aa17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 SREBF1P36956 1147 aa17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 TRADDQ15628 312 aa17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 PPP4R3CPQ6ZMV5 832 aa17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 C10orf67Q8IYJ2 551 aa17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 MYCT1Q8N699 235 aa17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 FAM76AQ8TAV0 307 aa17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 CRYGNQ8WXF5 182 aa17.19■□□□□ 0.34
ARHGEF40-203ENST00000554514 TCP10L2B9ZVM9 353 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 TRIM66O15016 1216 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 PLS1Q14651 629 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 Q4G0T1 1027 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 FOXR2Q6PJQ5 311 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 RBM46Q8TBY0 533 aaKnown RBP17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 AIPL1Q9NZN9 384 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 GCNT4Q9P109 453 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 FAM153BP0C7A2 387 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 CHRNA5P30532 468 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 EPHB4P54760 987 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 PPARDQ03181 441 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 FAM153CQ494X1 144 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 TATDN1Q6P1N9 297 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 ZNF572Q7Z3I7 529 aaPredicted RBP17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 PLCD3Q8N3E9 789 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 IPO4Q8TEX9 1081 aaKnown RBP17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 TAF4BQ92750 862 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 FAM153AQ9UHL3 310 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 PRR12Q9ULL5 1215 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 ASTN1O14525 1302 aa17.18■□□□□ 0.34
ARHGEF40-203ENST00000554514 CLRN2A0PK11 232 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 TMCO5BA8MYB1 307 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 FAM13AO94988 1023 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 EPB41P11171 864 aaKnown RBP17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 HOXA7P31268 230 aaPredicted RBP17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 COG2Q14746 738 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 STRIP1Q5VSL9 837 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 KCTD16Q68DU8 428 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 IRF2BP2Q7Z5L9 587 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 DYDC2Q96IM9 177 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 PKD2L1Q9P0L9 805 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 VAV3Q9UKW4 847 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 MEI1Q5TIA1 1274 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 FRMD5Q7Z6J6 570 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 PRMT6Q96LA8 375 aaPredicted RBP17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 IDI2Q9BXS1 227 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 TSKSQ9UJT2 592 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 TRAF3IP3Q9Y228 551 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 BCS1LQ9Y276 419 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 ITIH3Q06033 890 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 ALKBH5Q6P6C2 394 aaKnown RBP17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 MAEAQ7L5Y9 396 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 TRMT1LQ7Z2T5 733 aaKnown RBP17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 ACER1Q8TDN7 264 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 FAM20AQ96MK3 541 aa17.17■□□□□ 0.34
ARHGEF40-203ENST00000554514 GREB1LQ9C091 1923 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms