RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 RETREG2Q8NC44 543 aa16.02■□□□□ 0.16
SV2B-204ENST00000553727 FAM167AQ96KS9 214 aa16.02■□□□□ 0.16
SV2B-204ENST00000553727 EIF2AK1Q9BQI3 630 aaKnown RBP16.02■□□□□ 0.16
SV2B-204ENST00000553727 TUBE1Q9UJT0 475 aa16.02■□□□□ 0.16
SV2B-204ENST00000553727 DDX11L8A8MPP1 907 aa16.01■□□□□ 0.15
SV2B-204ENST00000553727 DKC1O60832 514 aaKnown RBP eCLIP16.01■□□□□ 0.15
SV2B-204ENST00000553727 HOXC8P31273 242 aa16.01■□□□□ 0.15
SV2B-204ENST00000553727 MAGEA10P43363 369 aaPredicted RBP16.01■□□□□ 0.15
SV2B-204ENST00000553727 ADAM17P78536 824 aa16.01■□□□□ 0.15
SV2B-204ENST00000553727 ATP2C1P98194 919 aaPredicted RBP16.01■□□□□ 0.15
SV2B-204ENST00000553727 CEBPZQ03701 1054 aaKnown RBP16.01■□□□□ 0.15
SV2B-204ENST00000553727 BFSP2Q13515 415 aa16.01■□□□□ 0.15
SV2B-204ENST00000553727 PKP1Q13835 747 aa16.01■□□□□ 0.15
SV2B-204ENST00000553727 SF3A1Q15459 793 aaKnown RBP16.01■□□□□ 0.15
SV2B-204ENST00000553727 XKR3Q5GH77 459 aa16.01■□□□□ 0.15
SV2B-204ENST00000553727 ZNF484Q5JVG2 852 aa16.01■□□□□ 0.15
SV2B-204ENST00000553727 MARCH8Q5T0T0 291 aa16.01■□□□□ 0.15
SV2B-204ENST00000553727 SERINC5Q86VE9 423 aa16.01■□□□□ 0.15
SV2B-204ENST00000553727 DHX38Q92620 1227 aaKnown RBP16.01■□□□□ 0.15
SV2B-204ENST00000553727 ZBTB10Q96DT7 871 aa16.01■□□□□ 0.15
SV2B-204ENST00000553727 LXNQ9BS40 222 aa16.01■□□□□ 0.15
SV2B-204ENST00000553727 SEPT9Q9UHD8 586 aaPredicted RBP16.01■□□□□ 0.15
SV2B-204ENST00000553727 CEP131Q9UPN4 1083 aa16.01■□□□□ 0.15
SV2B-204ENST00000553727 MKI67P46013 3256 aaKnown RBP16.01■□□□□ 0.15
SV2B-204ENST00000553727 SLITRK3O94933 977 aa16■□□□□ 0.15
SV2B-204ENST00000553727 KLRC1P26715 233 aa16■□□□□ 0.15
SV2B-204ENST00000553727 ANP32AP39687 249 aaKnown RBP16■□□□□ 0.15
SV2B-204ENST00000553727 THPOP40225 353 aa16■□□□□ 0.15
SV2B-204ENST00000553727 PRPHP41219 470 aa16■□□□□ 0.15
SV2B-204ENST00000553727 FXR2P51116 673 aaKnown RBP eCLIP16■□□□□ 0.15
SV2B-204ENST00000553727 IL17AQ16552 155 aa16■□□□□ 0.15
SV2B-204ENST00000553727 FOXD4L6Q3SYB3 417 aaPredicted RBP16■□□□□ 0.15
SV2B-204ENST00000553727 PRPF38BQ5VTL8 546 aaKnown RBP16■□□□□ 0.15
SV2B-204ENST00000553727 MTHFD1LQ6UB35 978 aa16■□□□□ 0.15
SV2B-204ENST00000553727 FOXD4L3Q6VB84 417 aaPredicted RBP16■□□□□ 0.15
SV2B-204ENST00000553727 RUFY4Q6ZNE9 571 aa16■□□□□ 0.15
SV2B-204ENST00000553727 TMEM199Q8N511 208 aa16■□□□□ 0.15
SV2B-204ENST00000553727 ERMNQ8TAM6 284 aa16■□□□□ 0.15
SV2B-204ENST00000553727 CAGE1Q8TC20 777 aa16■□□□□ 0.15
SV2B-204ENST00000553727 WNT8BQ93098 351 aa16■□□□□ 0.15
SV2B-204ENST00000553727 RAB34Q9BZG1 259 aa16■□□□□ 0.15
SV2B-204ENST00000553727 FTOQ9C0B1 505 aaKnown RBP eCLIP16■□□□□ 0.15
SV2B-204ENST00000553727 ZSWIM4Q9H7M6 989 aa16■□□□□ 0.15
SV2B-204ENST00000553727 WRAP73Q9P2S5 460 aaPredicted RBP16■□□□□ 0.15
SV2B-204ENST00000553727 DAXXQ9UER7 740 aaPredicted RBP16■□□□□ 0.15
SV2B-204ENST00000553727 LRWD1Q9UFC0 647 aa16■□□□□ 0.15
SV2B-204ENST00000553727 CLIC4Q9Y696 253 aa16■□□□□ 0.15
SV2B-204ENST00000553727 TMEM150BA6NC51 233 aa15.99■□□□□ 0.15
SV2B-204ENST00000553727 VWA3AA6NCI4 1184 aa15.99■□□□□ 0.15
SV2B-204ENST00000553727 BMP15O95972 392 aa15.99■□□□□ 0.15
SV2B-204ENST00000553727 F13A1P00488 732 aa15.99■□□□□ 0.15
SV2B-204ENST00000553727 CKBP12277 381 aa15.99■□□□□ 0.15
SV2B-204ENST00000553727 MTERF2Q49AM1 385 aa15.99■□□□□ 0.15
SV2B-204ENST00000553727 MFSD5Q6N075 450 aa15.99■□□□□ 0.15
SV2B-204ENST00000553727 NEK9Q8TD19 979 aa15.99■□□□□ 0.15
SV2B-204ENST00000553727 DNAJB3Q8WWF6 145 aa15.99■□□□□ 0.15
SV2B-204ENST00000553727 SCLYQ96I15 445 aa15.99■□□□□ 0.15
SV2B-204ENST00000553727 HSD17B14Q9BPX1 270 aa15.99■□□□□ 0.15
SV2B-204ENST00000553727 SH2D3AQ9BRG2 576 aa15.99■□□□□ 0.15
SV2B-204ENST00000553727 FAM49AQ9H0Q0 323 aaPredicted RBP15.99■□□□□ 0.15
SV2B-204ENST00000553727 COL1A2P08123 1366 aa15.99■□□□□ 0.15
SV2B-204ENST00000553727 MBLAC1A4D2B0 266 aaPredicted RBP15.98■□□□□ 0.15
SV2B-204ENST00000553727 ZBTB42B2RXF5 422 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 PITPNM1O00562 1244 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 STBD1O95210 358 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 IQCF3P0C7M6 154 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 CSF2RAP15509 400 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 FPGSQ05932 587 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 PDIA5Q14554 519 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 ARL6IP4Q66PJ3 421 aaKnown RBP15.98■□□□□ 0.15
SV2B-204ENST00000553727 PLA2G4FQ68DD2 849 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 TAF2Q6P1X5 1199 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 CHRDL2Q6WN34 429 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 LRRC8DQ7L1W4 858 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 RSPH3Q86UC2 560 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 C4orf19Q8IY42 314 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 METTL13Q8N6R0 699 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 ZNF396Q96N95 335 aaPredicted RBP15.98■□□□□ 0.15
SV2B-204ENST00000553727 UBE2OQ9C0C9 1292 aaKnown RBP15.98■□□□□ 0.15
SV2B-204ENST00000553727 WNT8AQ9H1J5 351 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 TFIP11Q9UBB9 837 aaKnown RBP15.98■□□□□ 0.15
SV2B-204ENST00000553727 PCDHA2Q9Y5H9 948 aa15.98■□□□□ 0.15
SV2B-204ENST00000553727 A0A087WWV3 80 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 PP2D1A8MPX8 630 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 ZBTB39O15060 712 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 MED24O75448 989 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 CTSHP09668 335 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 SELPP16109 830 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 CDC25AP30304 524 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 YWHABP31946 246 aaKnown RBP15.97■□□□□ 0.15
SV2B-204ENST00000553727 CCT6AP40227 531 aaKnown RBP15.97■□□□□ 0.15
SV2B-204ENST00000553727 TRIM71Q2Q1W2 868 aaKnown RBP15.97■□□□□ 0.15
SV2B-204ENST00000553727 ZNF618Q5T7W0 954 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 ANO5Q75V66 913 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 OTUD6AQ7L8S5 288 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 CATSPER3Q86XQ3 398 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 IGSF22Q8N9C0 903 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 SNX29Q8TEQ0 813 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 CEP170P1Q96L14 293 aa15.97■□□□□ 0.15
SV2B-204ENST00000553727 USP28Q96RU2 1077 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms