RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 KRTAP3-1Q9BYR8 98 aa6.08□□□□□ -1.44
SCFD1-210ENST00000553693 INCENPQ9NQS7 918 aa6.08□□□□□ -1.44
SCFD1-210ENST00000553693 FBXO10Q9UK96 956 aa6.08□□□□□ -1.44
SCFD1-210ENST00000553693 C1QTNF3-AMACRE9PGA6 284 aa6.07□□□□□ -1.44
SCFD1-210ENST00000553693 RASGRP1O95267 797 aa6.07□□□□□ -1.44
SCFD1-210ENST00000553693 CNOT4O95628 575 aaKnown RBP6.07□□□□□ -1.44
SCFD1-210ENST00000553693 C4BPAP04003 597 aaKnown RBP6.07□□□□□ -1.44
SCFD1-210ENST00000553693 WDR72Q3MJ13 1102 aa6.07□□□□□ -1.44
SCFD1-210ENST00000553693 CXXC5Q7LFL8 322 aaKnown RBP6.07□□□□□ -1.44
SCFD1-210ENST00000553693 SLC16A11Q8NCK7 471 aa6.07□□□□□ -1.44
SCFD1-210ENST00000553693 WDR48Q8TAF3 677 aa6.07□□□□□ -1.44
SCFD1-210ENST00000553693 SLC7A14Q8TBB6 771 aa6.07□□□□□ -1.44
SCFD1-210ENST00000553693 CDK5RAP1Q96SZ6 601 aaKnown RBP6.07□□□□□ -1.44
SCFD1-210ENST00000553693 MEGF9Q9H1U4 602 aa6.07□□□□□ -1.44
SCFD1-210ENST00000553693 GALNT8Q9NY28 637 aa6.07□□□□□ -1.44
SCFD1-210ENST00000553693 ST6GALNAC2Q9UJ37 374 aa6.07□□□□□ -1.44
SCFD1-210ENST00000553693 PTCH2Q9Y6C5 1203 aa6.07□□□□□ -1.44
SCFD1-210ENST00000553693 GPR42O15529 346 aa6.06□□□□□ -1.44
SCFD1-210ENST00000553693 KCNQ2O43526 872 aa6.06□□□□□ -1.44
SCFD1-210ENST00000553693 ETV4P43268 484 aa6.06□□□□□ -1.44
SCFD1-210ENST00000553693 TOP3AQ13472 1001 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-210ENST00000553693 GPR155Q7Z3F1 870 aa6.06□□□□□ -1.44
SCFD1-210ENST00000553693 BRAPQ7Z569 592 aa6.06□□□□□ -1.44
SCFD1-210ENST00000553693 NOSTRINQ8IVI9 506 aa6.06□□□□□ -1.44
SCFD1-210ENST00000553693 DNERQ8NFT8 737 aa6.06□□□□□ -1.44
SCFD1-210ENST00000553693 DNAJC2Q99543 621 aaKnown RBP6.06□□□□□ -1.44
SCFD1-210ENST00000553693 NCOA5Q9HCD5 579 aaKnown RBP6.06□□□□□ -1.44
SCFD1-210ENST00000553693 KCNH7Q9NS40 1196 aa6.06□□□□□ -1.44
SCFD1-210ENST00000553693 COQ6Q9Y2Z9 468 aa6.06□□□□□ -1.44
SCFD1-210ENST00000553693 ESYT3A0FGR9 886 aa6.05□□□□□ -1.44
SCFD1-210ENST00000553693 KCNK3O14649 394 aa6.05□□□□□ -1.44
SCFD1-210ENST00000553693 HIP1RO75146 1068 aa6.05□□□□□ -1.44
SCFD1-210ENST00000553693 SELENOPP49908 381 aa6.05□□□□□ -1.44
SCFD1-210ENST00000553693 ICAM4Q14773 271 aa6.05□□□□□ -1.44
SCFD1-210ENST00000553693 ZMAT1Q5H9K5 638 aa6.05□□□□□ -1.44
SCFD1-210ENST00000553693 SCLYQ96I15 445 aa6.05□□□□□ -1.44
SCFD1-210ENST00000553693 SCYL1Q96KG9 808 aa6.05□□□□□ -1.44
SCFD1-210ENST00000553693 LMF1Q96S06 567 aa6.05□□□□□ -1.44
SCFD1-210ENST00000553693 DEF6Q9H4E7 631 aa6.05□□□□□ -1.44
SCFD1-210ENST00000553693 BTBD7Q9P203 1132 aa6.05□□□□□ -1.44
SCFD1-210ENST00000553693 TCAF1Q9Y4C2 921 aa6.05□□□□□ -1.44
SCFD1-210ENST00000553693 TCRBV16S1A1N1A0A5B0 115 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 SLC12A8A0AV02 714 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 B4E1Z4 1266 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 SCDO00767 359 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 ZNF888P0CJ79 500 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-210ENST00000553693 MC4RP32245 332 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 IL13RA1P78552 427 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 STILQ15468 1287 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 HS1BP3Q53T59 392 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 SORCS2Q96PQ0 1159 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 BTBD2Q9BX70 525 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 KLC2Q9H0B6 622 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 CD248Q9HCU0 757 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 TSC22D4Q9Y3Q8 395 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 B3GALT1Q9Y5Z6 326 aa6.04□□□□□ -1.44
SCFD1-210ENST00000553693 PATE3B3GLJ2 98 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 PLD2O14939 933 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 MATN3O15232 486 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 HMGCRP04035 888 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 MMEP08473 750 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 RAC3P60763 192 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 BMS1Q14692 1282 aaKnown RBP6.03□□□□□ -1.44
SCFD1-210ENST00000553693 TMEM177Q53S58 311 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 OTOP2Q7RTS6 562 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 OVCH1Q7RTY7 1134 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 DDX53Q86TM3 631 aaKnown RBP6.03□□□□□ -1.44
SCFD1-210ENST00000553693 C2orf69Q8N8R5 385 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 HIPK4Q8NE63 616 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 NEIL1Q96FI4 390 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-210ENST00000553693 MRFAP1L1Q96HT8 127 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 WNK4Q96J92 1243 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 LRRC37BQ96QE4 947 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 MENTQ9BUN1 341 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 ZDHHC5Q9C0B5 715 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 SEMA4AQ9H3S1 761 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 TRIM39Q9HCM9 518 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 SRRDQ9UH36 339 aa6.03□□□□□ -1.44
SCFD1-210ENST00000553693 CDK11AQ9UQ88 783 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-210ENST00000553693 FOXP2O15409 715 aa6.02□□□□□ -1.45
SCFD1-210ENST00000553693 ECE1P42892 770 aa6.02□□□□□ -1.45
SCFD1-210ENST00000553693 SEC23AQ15436 765 aa6.02□□□□□ -1.45
SCFD1-210ENST00000553693 LILRB2Q8N423 598 aa6.02□□□□□ -1.45
SCFD1-210ENST00000553693 IGSF22Q8N9C0 903 aa6.02□□□□□ -1.45
SCFD1-210ENST00000553693 GIMAP8Q8ND71 665 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-210ENST00000553693 ASB15Q8WXK1 588 aa6.02□□□□□ -1.45
SCFD1-210ENST00000553693 PTPN18Q99952 460 aa6.02□□□□□ -1.45
SCFD1-210ENST00000553693 BOCQ9BWV1 1114 aa6.02□□□□□ -1.45
SCFD1-210ENST00000553693 OR10A5Q9H207 317 aa6.02□□□□□ -1.45
SCFD1-210ENST00000553693 MSL2Q9HCI7 577 aa6.02□□□□□ -1.45
SCFD1-210ENST00000553693 UCKL1Q9NWZ5 548 aa6.02□□□□□ -1.45
SCFD1-210ENST00000553693 PTPN22Q9Y2R2 807 aa6.02□□□□□ -1.45
SCFD1-210ENST00000553693 ASB1Q9Y576 335 aa6.02□□□□□ -1.45
SCFD1-210ENST00000553693 ZNF623O75123 536 aa6.01□□□□□ -1.45
SCFD1-210ENST00000553693 MPIG6BO95866 241 aa6.01□□□□□ -1.45
SCFD1-210ENST00000553693 SDHAP31040 664 aa6.01□□□□□ -1.45
SCFD1-210ENST00000553693 ADCY8P40145 1251 aa6.01□□□□□ -1.45
SCFD1-210ENST00000553693 RRADP55042 308 aa6.01□□□□□ -1.45
SCFD1-210ENST00000553693 IRF9Q00978 393 aa6.01□□□□□ -1.45
SCFD1-210ENST00000553693 FNDC3BQ53EP0 1204 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms