RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 TAF2Q6P1X5 1199 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 B3GNT9Q6UX72 402 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 RPAINQ86UA6 219 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 DIS3L2Q8IYB7 885 aaKnown RBP21.23■□□□□ 0.99
HDAC4-217ENST00000553145 DNAJB3Q8WWF6 145 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 TIFAQ96CG3 184 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 DISC1Q9NRI5 854 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 GABBR1Q9UBS5 961 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 YBX2Q9Y2T7 364 aaKnown RBP21.23■□□□□ 0.99
HDAC4-217ENST00000553145 SAMM50Q9Y512 469 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 IGSF9BQ9UPX0 1349 aa21.23■□□□□ 0.99
HDAC4-217ENST00000553145 ZBTB42B2RXF5 422 aa21.22■□□□□ 0.99
HDAC4-217ENST00000553145 HBP1O60381 514 aa21.22■□□□□ 0.99
HDAC4-217ENST00000553145 CHRNA1P02708 482 aa21.22■□□□□ 0.99
HDAC4-217ENST00000553145 WDR5P61964 334 aaKnown RBP21.22■□□□□ 0.99
HDAC4-217ENST00000553145 GUCY1B3Q02153 619 aa21.22■□□□□ 0.99
HDAC4-217ENST00000553145 MGAT3Q09327 533 aa21.22■□□□□ 0.99
HDAC4-217ENST00000553145 UGCGQ16739 394 aa21.22■□□□□ 0.99
HDAC4-217ENST00000553145 PPP4R3AQ6IN85 833 aa21.22■□□□□ 0.99
HDAC4-217ENST00000553145 DBF4BQ8NFT6 615 aa21.22■□□□□ 0.99
HDAC4-217ENST00000553145 BRMS1Q9HCU9 246 aa21.22■□□□□ 0.99
HDAC4-217ENST00000553145 WDR81Q562E7 1941 aa21.21■□□□□ 0.99
HDAC4-217ENST00000553145 TMEM265A0A087WTH1 108 aa21.21■□□□□ 0.99
HDAC4-217ENST00000553145 ZNF862O60290 1169 aa21.21■□□□□ 0.99
HDAC4-217ENST00000553145 MYOGP15173 224 aa21.21■□□□□ 0.99
HDAC4-217ENST00000553145 GCFC2P16383 781 aaKnown RBP21.21■□□□□ 0.99
HDAC4-217ENST00000553145 DEFB103AP81534 67 aa21.21■□□□□ 0.99
HDAC4-217ENST00000553145 TRIM29Q14134 588 aa21.21■□□□□ 0.99
HDAC4-217ENST00000553145 PLEKHG4Q58EX7 1191 aa21.21■□□□□ 0.99
HDAC4-217ENST00000553145 TRMT1LQ7Z2T5 733 aaKnown RBP21.21■□□□□ 0.99
HDAC4-217ENST00000553145 TNPO1Q92973 898 aaKnown RBP21.21■□□□□ 0.99
HDAC4-217ENST00000553145 SLC9A7Q96T83 725 aa21.21■□□□□ 0.99
HDAC4-217ENST00000553145 FAM49AQ9H0Q0 323 aaPredicted RBP21.21■□□□□ 0.99
HDAC4-217ENST00000553145 NKX2-4Q9H2Z4 354 aa21.21■□□□□ 0.99
HDAC4-217ENST00000553145 KCNMB3Q9NPA1 279 aa21.21■□□□□ 0.99
HDAC4-217ENST00000553145 WNT7AO00755 349 aa21.2■□□□□ 0.98
HDAC4-217ENST00000553145 CCNT1O60563 726 aaKnown RBP21.2■□□□□ 0.98
HDAC4-217ENST00000553145 SFNP31947 248 aa21.2■□□□□ 0.98
HDAC4-217ENST00000553145 JAK3P52333 1124 aa21.2■□□□□ 0.98
HDAC4-217ENST00000553145 MKRN4PQ13434 485 aaPredicted RBP21.2■□□□□ 0.98
HDAC4-217ENST00000553145 RAB30Q15771 203 aa21.2■□□□□ 0.98
HDAC4-217ENST00000553145 MTHFD1LQ6UB35 978 aa21.2■□□□□ 0.98
HDAC4-217ENST00000553145 TMCO2Q7Z6W1 182 aaPredicted RBP21.2■□□□□ 0.98
HDAC4-217ENST00000553145 POTEDQ86YR6 584 aa21.2■□□□□ 0.98
HDAC4-217ENST00000553145 CKAP2LQ8IYA6 745 aa21.2■□□□□ 0.98
HDAC4-217ENST00000553145 BBXQ8WY36 941 aaPredicted RBP21.2■□□□□ 0.98
HDAC4-217ENST00000553145 PCDHA2Q9Y5H9 948 aa21.2■□□□□ 0.98
HDAC4-217ENST00000553145 COL1A2P08123 1366 aa21.2■□□□□ 0.98
HDAC4-217ENST00000553145 ABHD14A-ACY1A0A1B0GW23 586 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 ST18O60284 1047 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 KLRC1P26715 233 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 KCNJ6P48051 423 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 ZNF484Q5JVG2 852 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 MIER3Q7Z3K6 550 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 RSPH3Q86UC2 560 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 HERC6Q8IVU3 1022 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 PHOSPHO2Q8TCD6 241 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 HAS1Q92839 578 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 C8orf76Q96K31 380 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 ZNF576Q9H609 170 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 MSRAQ9UJ68 235 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 VAV3Q9UKW4 847 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 PCDHA11Q9Y5I1 949 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 GTF3C3Q9Y5Q9 886 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 CDY2AQ9Y6F7 541 aa21.19■□□□□ 0.98
HDAC4-217ENST00000553145 MYH9P35579 1960 aaKnown RBP21.19■□□□□ 0.98
HDAC4-217ENST00000553145 SMIM35A0A1B0GVV1 85 aa21.18■□□□□ 0.98
HDAC4-217ENST00000553145 GHRP10912 638 aa21.18■□□□□ 0.98
HDAC4-217ENST00000553145 MRPS6P82932 125 aaKnown RBP21.18■□□□□ 0.98
HDAC4-217ENST00000553145 HMGN5P82970 282 aaKnown RBP21.18■□□□□ 0.98
HDAC4-217ENST00000553145 PRKCEQ02156 737 aa21.18■□□□□ 0.98
HDAC4-217ENST00000553145 TMEM62Q0P6H9 643 aa21.18■□□□□ 0.98
HDAC4-217ENST00000553145 IKBKEQ14164 716 aa21.18■□□□□ 0.98
HDAC4-217ENST00000553145 GRIN2CQ14957 1233 aa21.18■□□□□ 0.98
HDAC4-217ENST00000553145 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.18■□□□□ 0.98
HDAC4-217ENST00000553145 RDM1Q8NG50 284 aa21.18■□□□□ 0.98
HDAC4-217ENST00000553145 CDX2Q99626 313 aaPredicted RBP21.18■□□□□ 0.98
HDAC4-217ENST00000553145 NAP1L4Q99733 375 aaKnown RBP21.18■□□□□ 0.98
HDAC4-217ENST00000553145 MICAL3Q7RTP6 2002 aa21.17■□□□□ 0.98
HDAC4-217ENST00000553145 EML1O00423 815 aa21.17■□□□□ 0.98
HDAC4-217ENST00000553145 C22orf31O95567 290 aa21.17■□□□□ 0.98
HDAC4-217ENST00000553145 OATP04181 439 aa21.17■□□□□ 0.98
HDAC4-217ENST00000553145 LPIN1Q14693 890 aa21.17■□□□□ 0.98
HDAC4-217ENST00000553145 SEPT8Q92599 483 aa21.17■□□□□ 0.98
HDAC4-217ENST00000553145 TMX3Q96JJ7 454 aa21.17■□□□□ 0.98
HDAC4-217ENST00000553145 FAM167AQ96KS9 214 aa21.17■□□□□ 0.98
HDAC4-217ENST00000553145 FAM20AQ96MK3 541 aa21.17■□□□□ 0.98
HDAC4-217ENST00000553145 TBX3O15119 743 aa21.16■□□□□ 0.98
HDAC4-217ENST00000553145 ARHGEF15O94989 841 aa21.16■□□□□ 0.98
HDAC4-217ENST00000553145 FBXO47Q5MNV8 452 aa21.16■□□□□ 0.98
HDAC4-217ENST00000553145 MYLIPQ8WY64 445 aa21.16■□□□□ 0.98
HDAC4-217ENST00000553145 BACH2Q9BYV9 841 aa21.16■□□□□ 0.98
HDAC4-217ENST00000553145 IFIH1Q9BYX4 1025 aaKnown RBP21.16■□□□□ 0.98
HDAC4-217ENST00000553145 STXBP5LQ9Y2K9 1186 aa21.16■□□□□ 0.98
HDAC4-217ENST00000553145 TRPV2Q9Y5S1 764 aa21.16■□□□□ 0.98
HDAC4-217ENST00000553145 EFCAB14O75071 495 aa21.15■□□□□ 0.98
HDAC4-217ENST00000553145 STBD1O95210 358 aa21.15■□□□□ 0.98
HDAC4-217ENST00000553145 CA3P07451 260 aa21.15■□□□□ 0.98
HDAC4-217ENST00000553145 PPP2R5CQ13362 524 aa21.15■□□□□ 0.98
HDAC4-217ENST00000553145 KIAA0319LQ8IZA0 1049 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms