RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 EMID1Q96A84 441 aaPredicted RBP6.08□□□□□ -1.44
CKAP4-203ENST00000553039 PURBQ96QR8 312 aaKnown RBP6.08□□□□□ -1.44
CKAP4-203ENST00000553039 APOL5Q9BWW9 433 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 CCDC8Q9H0W5 538 aaPredicted RBP6.08□□□□□ -1.44
CKAP4-203ENST00000553039 ANTXR1Q9H6X2 564 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 MTMR4Q9NYA4 1195 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 IGSF9Q9P2J2 1179 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 RABGEF1Q9UJ41 708 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 DBR1Q9UK59 544 aaKnown RBP6.08□□□□□ -1.44
CKAP4-203ENST00000553039 GMEB2Q9UKD1 530 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 KMT2EQ8IZD2 1858 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 CDK5RAP2Q96SN8 1893 aa6.08□□□□□ -1.44
CKAP4-203ENST00000553039 SIP14410 1827 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 CFHP08603 1231 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 MCCP23508 829 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 EDNRBP24530 442 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 RARSP54136 660 aaKnown RBP6.07□□□□□ -1.44
CKAP4-203ENST00000553039 KRT17Q04695 432 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 LY6KQ17RY6 165 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 FAM26DQ5JW98 314 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 CTR9Q6PD62 1173 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 RSPH3Q86UC2 560 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 DEPDC4Q8N2C3 294 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 LCORLQ8N3X6 602 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 PPTC7Q8NI37 304 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 NSUN6Q8TEA1 469 aaKnown RBP6.07□□□□□ -1.44
CKAP4-203ENST00000553039 GMCL1Q96IK5 515 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 SHDQ96IW2 340 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 IWS1Q96ST2 819 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 MEIS3Q99687 375 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 FTHL17Q9BXU8 183 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 SLC4A5Q9BY07 1137 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.07□□□□□ -1.44
CKAP4-203ENST00000553039 ARMT1Q9H993 441 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 ERVK-5Q9HDB9 667 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 TMEM260Q9NX78 707 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 ANKFY1Q9P2R3 1169 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 DDX41Q9UJV9 622 aaKnown RBP6.07□□□□□ -1.44
CKAP4-203ENST00000553039 FBXO4Q9UKT5 387 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 RAB23Q9ULC3 237 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 LRFN2Q9ULH4 789 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 LZTS1Q9Y250 596 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 PCDHGA2Q9Y5H1 932 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 MRPL42Q9Y6G3 142 aaKnown RBP6.07□□□□□ -1.44
CKAP4-203ENST00000553039 SLC4A4Q9Y6R1 1079 aa6.07□□□□□ -1.44
CKAP4-203ENST00000553039 TRIP12Q14669 1992 aaPredicted RBP6.07□□□□□ -1.44
CKAP4-203ENST00000553039 MYO10Q9HD67 2058 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 SIPA1L1O43166 1804 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 CYP2D7A0A087X1C5 515 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 LAMTOR5O43504 91 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 PRKAB2O43741 272 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 EIF3JO75822 258 aaKnown RBP6.06□□□□□ -1.44
CKAP4-203ENST00000553039 DKK1O94907 266 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 EOMESO95936 686 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 F2P00734 622 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 ARHGAP1Q07960 439 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 KCNC3Q14003 757 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 SLFNL1Q499Z3 407 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 SBK1Q52WX2 424 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 SPECC1Q5M775 1068 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 IL31Q6EBC2 164 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 LLGL2Q6P1M3 1020 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 XRRA1Q6P2D8 792 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 TRIM50Q86XT4 487 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 THNSL1Q8IYQ7 743 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 KDF1Q8NAX2 398 aaPredicted RBP6.06□□□□□ -1.44
CKAP4-203ENST00000553039 PLPP7Q8NBV4 271 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 GPKOWQ92917 476 aaPredicted RBP eCLIP6.06□□□□□ -1.44
CKAP4-203ENST00000553039 WNT8BQ93098 351 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 NXPE3Q969Y0 559 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 RNPEPQ9H4A4 650 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 POMKQ9H5K3 350 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 KCNK12Q9HB15 430 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 ARPP21Q9UBL0 812 aaPredicted RBP6.06□□□□□ -1.44
CKAP4-203ENST00000553039 DBNLQ9UJU6 430 aaKnown RBP6.06□□□□□ -1.44
CKAP4-203ENST00000553039 PRR12Q9ULL5 1215 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 NOB1Q9ULX3 412 aaKnown RBP6.06□□□□□ -1.44
CKAP4-203ENST00000553039 DUSP12Q9UNI6 340 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 PCDHB7Q9Y5E2 793 aa6.06□□□□□ -1.44
CKAP4-203ENST00000553039 USP24Q9UPU5 2620 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 COL4A4P53420 1690 aaPredicted RBP6.05□□□□□ -1.44
CKAP4-203ENST00000553039 TMEM8BA6NDV4 472 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 MINDY4BA8MYZ0 360 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 H3BRB1 525 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 TREHO43280 583 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 LRP3O75074 770 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 FGF18O76093 207 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 MBD4O95243 580 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 ARIH2O95376 493 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 RPLP2P05387 115 aaKnown RBP6.05□□□□□ -1.44
CKAP4-203ENST00000553039 SLC3A2P08195 630 aaKnown RBP6.05□□□□□ -1.44
CKAP4-203ENST00000553039 CTSHP09668 335 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 TSPY3P0CV98 308 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 TSPY8P0CW00 308 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 ATP1A2P50993 1020 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 ERVFC1P60507 584 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 RPS6P62753 249 aaKnown RBP6.05□□□□□ -1.44
CKAP4-203ENST00000553039 RBM10P98175 930 aaKnown RBP6.05□□□□□ -1.44
CKAP4-203ENST00000553039 ATP8B2P98198 1209 aa6.05□□□□□ -1.44
CKAP4-203ENST00000553039 DPYDQ12882 1025 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms