RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 SMIM10L2AP0DMW4 78 aa11.17□□□□□ -0.62
LETMD1-234ENST00000552645 SMIM10L2BP0DMW5 78 aa11.17□□□□□ -0.62
LETMD1-234ENST00000552645 SFNP31947 248 aa11.17□□□□□ -0.62
LETMD1-234ENST00000552645 CDK7P50613 346 aa11.17□□□□□ -0.62
LETMD1-234ENST00000552645 GABPB1Q06547 395 aaPredicted RBP11.17□□□□□ -0.62
LETMD1-234ENST00000552645 PTGDRQ13258 359 aa11.17□□□□□ -0.62
LETMD1-234ENST00000552645 FOXD4L6Q3SYB3 417 aaPredicted RBP11.17□□□□□ -0.62
LETMD1-234ENST00000552645 C1orf53Q5VUE5 145 aa11.17□□□□□ -0.62
LETMD1-234ENST00000552645 GDF6Q6KF10 455 aaPredicted RBP11.17□□□□□ -0.62
LETMD1-234ENST00000552645 FAM173BQ6P4H8 233 aa11.17□□□□□ -0.62
LETMD1-234ENST00000552645 FOXD4L3Q6VB84 417 aaPredicted RBP11.17□□□□□ -0.62
LETMD1-234ENST00000552645 ANKRD33Q7Z3H0 272 aa11.17□□□□□ -0.62
LETMD1-234ENST00000552645 FAM126BQ8IXS8 530 aa11.17□□□□□ -0.62
LETMD1-234ENST00000552645 PCYT2Q99447 389 aa11.17□□□□□ -0.62
LETMD1-234ENST00000552645 VAV3Q9UKW4 847 aa11.17□□□□□ -0.62
LETMD1-234ENST00000552645 HAS3O00219 553 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 EML1O00423 815 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 LGR5O75473 907 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 ATG7O95352 703 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 CYP2C9P11712 490 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 TECP42680 631 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 ZNF200P98182 395 aaPredicted RBP11.16□□□□□ -0.62
LETMD1-234ENST00000552645 CEBPZQ03701 1054 aaKnown RBP11.16□□□□□ -0.62
LETMD1-234ENST00000552645 FAAP100Q0VG06 881 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 PKP1Q13835 747 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 PTGISQ16647 500 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 SH3RF1Q7Z6J0 888 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 SLC43A3Q8NBI5 491 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 BANK1Q8NDB2 785 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 MTMR9Q96QG7 549 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 SETD4Q9NVD3 440 aa11.16□□□□□ -0.62
LETMD1-234ENST00000552645 EVPLQ92817 2033 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 C17orf102A2RUQ5 167 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 POTEMA6NI47 508 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 H0YGN5 161 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 CYP4A11Q02928 519 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 RESTQ13127 1097 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 PPFIA1Q13136 1202 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 PPP2R5CQ13362 524 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 ORC2Q13416 577 aaPredicted RBP11.15□□□□□ -0.62
LETMD1-234ENST00000552645 UGCGQ16739 394 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 TMEM266Q2M3C6 531 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 UVSSAQ2YD98 709 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 PLPPR4Q7Z2D5 763 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 ANKRD7Q92527 254 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 ATP6V0A1Q93050 837 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 TOX2Q96NM4 488 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 SEZ6LQ9BYH1 1024 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 PPP1R12CQ9BZL4 782 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 PDLIM7Q9NR12 457 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 GTF2IRD1Q9UHL9 959 aa11.15□□□□□ -0.62
LETMD1-234ENST00000552645 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.15□□□□□ -0.624e-7■■■□□ 16.6
LETMD1-234ENST00000552645 IGKV6D-21A0A0A0MT36 114 aa11.14□□□□□ -0.63
LETMD1-234ENST00000552645 TRIM43BA6NCK2 446 aa11.14□□□□□ -0.63
LETMD1-234ENST00000552645 CD4P01730 458 aa11.14□□□□□ -0.63
LETMD1-234ENST00000552645 ZSCAN22P10073 491 aaPredicted RBP11.14□□□□□ -0.63
LETMD1-234ENST00000552645 GNAT1P11488 350 aa11.14□□□□□ -0.63
LETMD1-234ENST00000552645 RAG1P15918 1043 aa11.14□□□□□ -0.63
LETMD1-234ENST00000552645 PTPN11Q06124 597 aaPredicted RBP11.14□□□□□ -0.63
LETMD1-234ENST00000552645 HIC1Q14526 733 aa11.14□□□□□ -0.63
LETMD1-234ENST00000552645 PLCB4Q15147 1175 aa11.14□□□□□ -0.63
LETMD1-234ENST00000552645 SYCP1Q15431 976 aa11.14□□□□□ -0.63
LETMD1-234ENST00000552645 GRIK4Q16099 956 aa11.14□□□□□ -0.63
LETMD1-234ENST00000552645 AFAP1L1Q8TED9 768 aa11.14□□□□□ -0.63
LETMD1-234ENST00000552645 LMBR1Q8WVP7 490 aa11.14□□□□□ -0.63
LETMD1-234ENST00000552645 TRAPPC12Q8WVT3 735 aa11.14□□□□□ -0.63
LETMD1-234ENST00000552645 TRIM43Q96BQ3 446 aaPredicted RBP11.14□□□□□ -0.63
LETMD1-234ENST00000552645 ZBTB10Q96DT7 871 aa11.14□□□□□ -0.63
LETMD1-234ENST00000552645 FTOQ9C0B1 505 aaKnown RBP eCLIP11.14□□□□□ -0.63
LETMD1-234ENST00000552645 ZSCAN16Q9H4T2 348 aaPredicted RBP11.14□□□□□ -0.63
LETMD1-234ENST00000552645 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.14□□□□□ -0.63
LETMD1-234ENST00000552645 TREHO43280 583 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 INSRRP14616 1297 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 SLC26A2P50443 739 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 CBX1P83916 185 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 MDM2Q00987 491 aaPredicted RBP11.13□□□□□ -0.63
LETMD1-234ENST00000552645 PRKCEQ02156 737 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 SPIRE1Q08AE8 756 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 CTTNQ14247 550 aaKnown RBP11.13□□□□□ -0.63
LETMD1-234ENST00000552645 SF3A1Q15459 793 aaKnown RBP11.13□□□□□ -0.63
LETMD1-234ENST00000552645 SESTD1Q86VW0 696 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 TPH2Q8IWU9 490 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 PDCL2Q8N4E4 241 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 C4orf32Q8N8J7 132 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 RDM1Q8NG50 284 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 ATP8B4Q8TF62 1192 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 DYDC2Q96IM9 177 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 LBHD1Q9BQE6 289 aaPredicted RBP11.13□□□□□ -0.63
LETMD1-234ENST00000552645 HIPK3Q9H422 1215 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 RGL1Q9NZL6 768 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 SEPT9Q9UHD8 586 aaPredicted RBP11.13□□□□□ -0.63
LETMD1-234ENST00000552645 MAFBQ9Y5Q3 323 aaPredicted RBP11.13□□□□□ -0.63
LETMD1-234ENST00000552645 CLIC4Q9Y696 253 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 NRCAMQ92823 1304 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 IGSF9BQ9UPX0 1349 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 TMEM150BA6NC51 233 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 ZNF862O60290 1169 aa11.13□□□□□ -0.63
LETMD1-234ENST00000552645 F13A1P00488 732 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms