RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 ST18O60284 1047 aa19.38■□□□□ 0.69
CACNB3-222ENST00000552465 PPFIA3O75145 1194 aa19.38■□□□□ 0.69
CACNB3-222ENST00000552465 KIF5BP33176 963 aa19.38■□□□□ 0.69
CACNB3-222ENST00000552465 SIGLEC14Q08ET2 396 aa19.38■□□□□ 0.69
CACNB3-222ENST00000552465 PAK2Q13177 524 aa19.38■□□□□ 0.69
CACNB3-222ENST00000552465 CTCFLQ8NI51 663 aaPredicted RBP19.38■□□□□ 0.69
CACNB3-222ENST00000552465 MICAL1Q8TDZ2 1067 aa19.38■□□□□ 0.69
CACNB3-222ENST00000552465 ATP8B4Q8TF62 1192 aa19.38■□□□□ 0.69
CACNB3-222ENST00000552465 RPGRIP1Q96KN7 1286 aa19.38■□□□□ 0.69
CACNB3-222ENST00000552465 LZTS2Q9BRK4 669 aa19.38■□□□□ 0.69
CACNB3-222ENST00000552465 MYL10Q9BUA6 226 aa19.38■□□□□ 0.69
CACNB3-222ENST00000552465 TMX1Q9H3N1 280 aa19.38■□□□□ 0.69
CACNB3-222ENST00000552465 JADE2Q9NQC1 790 aa19.38■□□□□ 0.69
CACNB3-222ENST00000552465 PER2O15055 1255 aa19.37■□□□□ 0.69
CACNB3-222ENST00000552465 DDAH1O94760 285 aa19.37■□□□□ 0.69
CACNB3-222ENST00000552465 ATF7P17544 494 aaPredicted RBP19.37■□□□□ 0.69
CACNB3-222ENST00000552465 UBE3AQ05086 875 aa19.37■□□□□ 0.69
CACNB3-222ENST00000552465 ZNF654Q8IZM8 581 aa19.37■□□□□ 0.69
CACNB3-222ENST00000552465 NME8Q8N427 588 aa19.37■□□□□ 0.69
CACNB3-222ENST00000552465 TRAPPC12Q8WVT3 735 aa19.37■□□□□ 0.69
CACNB3-222ENST00000552465 SUSD6Q92537 303 aa19.37■□□□□ 0.69
CACNB3-222ENST00000552465 TNPO1Q92973 898 aaKnown RBP19.37■□□□□ 0.69
CACNB3-222ENST00000552465 AZI2Q9H6S1 392 aa19.37■□□□□ 0.69
CACNB3-222ENST00000552465 JPH1Q9HDC5 661 aaPredicted RBP19.37■□□□□ 0.69
CACNB3-222ENST00000552465 TRPC6Q9Y210 931 aa19.37■□□□□ 0.69
CACNB3-222ENST00000552465 PCDHB12Q9Y5F1 795 aa19.37■□□□□ 0.69
CACNB3-222ENST00000552465 KAT6AQ92794 2004 aa19.37■□□□□ 0.69
CACNB3-222ENST00000552465 KDM3AQ9Y4C1 1321 aa19.36■□□□□ 0.69
CACNB3-222ENST00000552465 SARSP49591 514 aaKnown RBP19.36■□□□□ 0.69
CACNB3-222ENST00000552465 RBM10P98175 930 aaKnown RBP19.36■□□□□ 0.69
CACNB3-222ENST00000552465 PLCB4Q15147 1175 aa19.36■□□□□ 0.69
CACNB3-222ENST00000552465 MB21D2Q8IYB1 491 aaPredicted RBP19.36■□□□□ 0.69
CACNB3-222ENST00000552465 SRBD1Q8N5C6 995 aaKnown RBP19.36■□□□□ 0.69
CACNB3-222ENST00000552465 VN1R2Q8NFZ6 395 aa19.36■□□□□ 0.69
CACNB3-222ENST00000552465 LY9Q9HBG7 655 aa19.36■□□□□ 0.69
CACNB3-222ENST00000552465 SLC9A2Q9UBY0 812 aa19.36■□□□□ 0.69
CACNB3-222ENST00000552465 PCDHB7Q9Y5E2 793 aa19.36■□□□□ 0.69
CACNB3-222ENST00000552465 SMIM35A0A1B0GVV1 85 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 PLEKHA8P1O95397 391 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 GNAQP50148 359 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 KRT76Q01546 638 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 UBE2SQ16763 222 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 DUSP6Q16828 381 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 TMEM266Q2M3C6 531 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 FAM43BQ6ZT52 329 aaPredicted RBP19.35■□□□□ 0.69
CACNB3-222ENST00000552465 PLPPR4Q7Z2D5 763 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 RUFY2Q8WXA3 655 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 ASIC4Q96FT7 647 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 CDCA3Q99618 268 aaPredicted RBP19.35■□□□□ 0.69
CACNB3-222ENST00000552465 TLR9Q9NR96 1032 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 AAASQ9NRG9 546 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 PCDHA6Q9UN73 950 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 PCDHA8Q9Y5H6 950 aa19.35■□□□□ 0.69
CACNB3-222ENST00000552465 SPDYE3A6NKU9 549 aa19.34■□□□□ 0.69
CACNB3-222ENST00000552465 IBSPP21815 317 aaPredicted RBP19.34■□□□□ 0.69
CACNB3-222ENST00000552465 AVPR2P30518 371 aa19.34■□□□□ 0.69
CACNB3-222ENST00000552465 STAT5BP51692 787 aa19.34■□□□□ 0.69
CACNB3-222ENST00000552465 VCPP55072 806 aaKnown RBP19.34■□□□□ 0.69
CACNB3-222ENST00000552465 ERVFC1P60507 584 aa19.34■□□□□ 0.69
CACNB3-222ENST00000552465 NFX1Q12986 1120 aaKnown RBP19.34■□□□□ 0.69
CACNB3-222ENST00000552465 SPOUT1Q5T280 376 aaKnown RBP19.34■□□□□ 0.69
CACNB3-222ENST00000552465 MTHFD1LQ6UB35 978 aa19.34■□□□□ 0.69
CACNB3-222ENST00000552465 CMTR1Q8N1G2 835 aaKnown RBP19.34■□□□□ 0.69
CACNB3-222ENST00000552465 NEK1Q96PY6 1258 aa19.34■□□□□ 0.69
CACNB3-222ENST00000552465 KCNH7Q9NS40 1196 aa19.34■□□□□ 0.69
CACNB3-222ENST00000552465 FSD2A1L4K1 749 aa19.33■□□□□ 0.68
CACNB3-222ENST00000552465 TBKBP1A7MCY6 615 aa19.33■□□□□ 0.68
CACNB3-222ENST00000552465 MGEA5O60502 916 aa19.33■□□□□ 0.68
CACNB3-222ENST00000552465 FGF18O76093 207 aa19.33■□□□□ 0.68
CACNB3-222ENST00000552465 GSPT1P15170 499 aaKnown RBP19.33■□□□□ 0.68
CACNB3-222ENST00000552465 CHMLP26374 656 aa19.33■□□□□ 0.68
CACNB3-222ENST00000552465 ACTR2P61160 394 aa19.33■□□□□ 0.68
CACNB3-222ENST00000552465 TTC22Q5TAA0 569 aa19.33■□□□□ 0.68
CACNB3-222ENST00000552465 PDE12Q6L8Q7 609 aaKnown RBP19.33■□□□□ 0.68
CACNB3-222ENST00000552465 TMEM184AQ6ZMB5 413 aa19.33■□□□□ 0.68
CACNB3-222ENST00000552465 MXRA8Q9BRK3 442 aa19.33■□□□□ 0.68
CACNB3-222ENST00000552465 S1PR5Q9H228 398 aa19.33■□□□□ 0.68
CACNB3-222ENST00000552465 ERVK-5Q9HDB9 667 aa19.33■□□□□ 0.68
CACNB3-222ENST00000552465 FAM86C1Q9NVL1 165 aa19.33■□□□□ 0.68
CACNB3-222ENST00000552465 NOC2LQ9Y3T9 749 aaKnown RBP19.33■□□□□ 0.68
CACNB3-222ENST00000552465 FSCN2O14926 492 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 PTPN21Q16825 1174 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 FAM102BQ5T8I3 360 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 CYP2W1Q8TAV3 490 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 ADAM2Q99965 735 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 SDF4Q9BRK5 362 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 MTA3Q9BTC8 594 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 IRF2BPLQ9H1B7 796 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 CDHR5Q9HBB8 845 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 RGS18Q9NS28 235 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 C1orf112Q9NSG2 853 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 TYW1Q9NV66 732 aaKnown RBP19.32■□□□□ 0.68
CACNB3-222ENST00000552465 RNF216Q9NWF9 866 aaPredicted RBP19.32■□□□□ 0.68
CACNB3-222ENST00000552465 TMEM260Q9NX78 707 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 WDFY4Q6ZS81 3184 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 C5orf42Q9H799 3197 aa19.32■□□□□ 0.68
CACNB3-222ENST00000552465 NFASCO94856 1347 aa19.31■□□□□ 0.68
CACNB3-222ENST00000552465 KIAA1671Q9BY89 1806 aa19.31■□□□□ 0.68
CACNB3-222ENST00000552465 hCG_1642624A0A1W2PR95 340 aa19.31■□□□□ 0.68
CACNB3-222ENST00000552465 C9IYK1 514 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms