RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	TAF6L	Q9Y6J9	622 aa		7.81	□□□□□ -1.16
CNOT2-238	ENST00000552422	TNRC18	O15417	2968 aa	Predicted RBP	7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	MYPN	Q86TC9	1320 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422		F5H6K3	240 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	NDUFB5	O43674	189 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	FLOT1	O75955	427 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	NDUFB10	O96000	172 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	CTGF	P29279	349 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	KLRC3	Q07444	240 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	C19orf57	Q0VDD7	668 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	NECTIN1	Q15223	517 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	RCSD1	Q6JBY9	416 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	STOX1	Q6ZVD7	989 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	OTOP1	Q7RTM1	612 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	CTU1	Q7Z7A3	348 aa	Known RBP	7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	IQCA1	Q86XH1	822 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	ANKRD13C	Q8N6S4	541 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	CD99L2	Q8TCZ2	262 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	P2RX7	Q99572	595 aa	Known RBP	7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	ARHGAP39	Q9C0H5	1083 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	TXNRD2	Q9NNW7	524 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	ZSWIM5	Q9P217	1185 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422	PDE4DIP	Q5VU43	2346 aa		7.8	□□□□□ -1.16
CNOT2-238	ENST00000552422		E7EWF7	191 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	SLC27A2	O14975	620 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	DHX15	O43143	795 aa	Known RBP	7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	REC8	O95072	547 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	TOP1	P11387	765 aa	Known RBP	7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	FST	P19883	344 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	ERVK-24	P63145	666 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	IKBKE	Q14164	716 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	COG2	Q14746	738 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	KIF22	Q14807	665 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	CCDC178	Q5BJE1	867 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	FAM83B	Q5T0W9	1011 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	ARTN	Q5T4W7	220 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	CREB3L3	Q68CJ9	461 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	RASGRP2	Q7LDG7	609 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	VN1R5	Q7Z5H4	357 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	MB21D1	Q8N884	522 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	ENAH	Q8N8S7	591 aa	Predicted RBP	7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	TTC14	Q96N46	770 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	NUP88	Q99567	741 aa	Predicted RBP	7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	TMEM47	Q9BQJ4	181 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	BHLHE41	Q9C0J9	482 aa	Predicted RBP	7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	ZFP64	Q9NPA5	681 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	HOXC10	Q9NYD6	342 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	RBPJL	Q9UBG7	517 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	ADAMTS5	Q9UNA0	930 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	RAX	Q9Y2V3	346 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	RABGAP1	Q9Y3P9	1069 aa		7.79	□□□□□ -1.16
CNOT2-238	ENST00000552422	TNKS	O95271	1327 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	LRRC37A2	A6NM11	1700 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	KIAA1217	Q5T5P2	1943 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	EPB41L2	O43491	1005 aa	Known RBP	7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	PEX10	O60683	326 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	CNMD	O75829	334 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	SNHG28	P0DPA3	235 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	SLC1A4	P43007	532 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	PSMC4	P43686	418 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	FCGRT	P55899	365 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	ARHGAP4	P98171	946 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	TRDN	Q13061	729 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	ARHGEF6	Q15052	776 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	SEC23A	Q15436	765 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	PKN2	Q16513	984 aa	Known RBP	7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	ECM1	Q16610	540 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	UVSSA	Q2YD98	709 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	HGSNAT	Q68CP4	663 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	SLFN13	Q68D06	897 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	CYB5R4	Q7L1T6	521 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	RALYL	Q86SE5	291 aa	Known RBP	7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	DGKH	Q86XP1	1220 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	MB21D2	Q8IYB1	491 aa	Predicted RBP	7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	GPRC5A	Q8NFJ5	357 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	NCOA7	Q8NI08	942 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	ANKS1A	Q92625	1134 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	UTP4	Q969X6	686 aa	Known RBP	7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	ATG4C	Q96DT6	458 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	SLF1	Q9BQI6	1058 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	UBAC1	Q9BSL1	405 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	PAGR1	Q9BTK6	254 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	RUSC1	Q9BVN2	902 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	FBXO28	Q9NVF7	368 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	BTBD7	Q9P203	1132 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	PPP1R9A	Q9ULJ8	1098 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	TRIM17	Q9Y577	477 aa		7.78	□□□□□ -1.16
CNOT2-238	ENST00000552422	VWA5A	O00534	786 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	SOX1	O00570	391 aa	Predicted RBP	7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	TNPO2	O14787	897 aa	Known RBP	7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	SART1	O43290	800 aa	Known RBP	7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	PLA2G6	O60733	806 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	PDHB	P11177	359 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	BMP3	P12645	472 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	MCC	P23508	829 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	STAT2	P52630	851 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	ANTXR2	P58335	489 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	CCNA1	P78396	465 aa		7.77	□□□□□ -1.17
CNOT2-238	ENST00000552422	FBXO46	Q6PJ61	603 aa	Predicted RBP	7.77	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms