RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 RALGAPA2Q2PPJ7 1873 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 LOC102724159A0A0B4J2E5 919 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 STXBP3O00186 592 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 CSPG5O95196 566 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 ARIH2O95376 493 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 ICAM1P05362 532 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 MMP3P08254 477 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 ATP5JP18859 108 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 TDO2P48775 406 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 VCPP55072 806 aaKnown RBP6.34□□□□□ -1.39
HOXB3-213ENST00000552000 ZNF200P98182 395 aaPredicted RBP6.34□□□□□ -1.39
HOXB3-213ENST00000552000 TFAP4Q01664 338 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 HYAL1Q12794 435 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 SMAD4Q13485 552 aaKnown RBP6.34□□□□□ -1.39
HOXB3-213ENST00000552000 GAS6Q14393 721 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 PWP2Q15269 919 aaKnown RBP6.34□□□□□ -1.39
HOXB3-213ENST00000552000 PKN1Q16512 942 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 CCDC96Q2M329 555 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 TRIM71Q2Q1W2 868 aaKnown RBP6.34□□□□□ -1.39
HOXB3-213ENST00000552000 ZNF618Q5T7W0 954 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 RCSD1Q6JBY9 416 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 ZSCAN25Q6NSZ9 544 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 GIMAP6Q6P9H5 292 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 CHST3Q7LGC8 479 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 SESTD1Q86VW0 696 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 FBXO11Q86XK2 927 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 FBXL6Q8N531 539 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 C7orf31Q8N865 590 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 DBF4BQ8NFT6 615 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 ATOH1Q92858 354 aaPredicted RBP6.34□□□□□ -1.39
HOXB3-213ENST00000552000 SAMD11Q96NU1 681 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 KCTD15Q96SI1 283 aaPredicted RBP6.34□□□□□ -1.39
HOXB3-213ENST00000552000 ALG1Q9BT22 464 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 IGFLR1Q9H665 355 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 ZNF287Q9HBT7 754 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 GTF2IRD1Q9UHL9 959 aa6.34□□□□□ -1.39
HOXB3-213ENST00000552000 PLIN4Q96Q06 1357 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 NCK2O43639 380 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 NMT2O60551 498 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 TBX10O75333 385 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 GH1P01241 217 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 APPP05067 770 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 ITGB2P05107 769 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 EDNRBP24530 442 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 CTNNB1P35222 781 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 GTF2F1P35269 517 aaKnown RBP eCLIP6.33□□□□□ -1.41e-9■■■□□ 17.3
HOXB3-213ENST00000552000 SLC16A2P36021 539 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 ZXDAP98168 799 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 PTK7Q13308 1070 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 AMHR2Q16671 573 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 SYDE2Q5VT97 1194 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 TTBK2Q6IQ55 1244 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 CCDC62Q6P9F0 684 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 RNF207Q6ZRF8 634 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 SEPT14Q6ZU15 432 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 Q8N3U1 123 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 OSBP2Q969R2 916 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 MPHOSPH6Q99547 160 aaKnown RBP6.33□□□□□ -1.4
HOXB3-213ENST00000552000 RANBP17Q9H2T7 1088 aaKnown RBP6.33□□□□□ -1.4
HOXB3-213ENST00000552000 ZNF395Q9H8N7 513 aaPredicted RBP6.33□□□□□ -1.4
HOXB3-213ENST00000552000 ALG13Q9NP73 1137 aaKnown RBP6.33□□□□□ -1.4
HOXB3-213ENST00000552000 CD207Q9UJ71 328 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 STX8Q9UNK0 236 aa6.33□□□□□ -1.4
HOXB3-213ENST00000552000 SDK1Q7Z5N4 2213 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 H0Y858 1186 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 GRM6O15303 877 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 LINC01565O15544 149 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 GPAA1O43292 621 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 ZNF286BP0CG31 522 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 CASTP20810 708 aaKnown RBP6.32□□□□□ -1.4
HOXB3-213ENST00000552000 AVPR2P30518 371 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 RPS6P62753 249 aaKnown RBP6.32□□□□□ -1.4
HOXB3-213ENST00000552000 ARHGAP1Q07960 439 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 DGKDQ16760 1214 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 LY6KQ17RY6 165 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 KIAA0753Q2KHM9 967 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 ASCL5Q7RTU5 278 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 LYSMD3Q7Z3D4 306 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 IFNL3Q8IZI9 196 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 CLEC4DQ8WXI8 215 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 ARHGAP9Q9BRR9 750 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 IFIH1Q9BYX4 1025 aaKnown RBP6.32□□□□□ -1.4
HOXB3-213ENST00000552000 TLR9Q9NR96 1032 aa6.32□□□□□ -1.4
HOXB3-213ENST00000552000 FRMPD2Q68DX3 1309 aaPredicted RBP6.31□□□□□ -1.4
HOXB3-213ENST00000552000 EMSYQ7Z589 1322 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 DNAH14Q0VDD8 3507 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 COL4A6Q14031 1691 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.31□□□□□ -1.4
HOXB3-213ENST00000552000 TSPY2A6NKD2 308 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 RSPH10B2B2RC85 870 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 B4DLN1 442 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 LOC730098B7Z3J9 87 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 M0R2C6 588 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 SLC3A2P08195 630 aaKnown RBP6.31□□□□□ -1.4
HOXB3-213ENST00000552000 CTSHP09668 335 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 RSPH10BP0C881 870 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 GNAT2P19087 354 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 THPOP40225 353 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 NDUFV1P49821 464 aa6.31□□□□□ -1.4
HOXB3-213ENST00000552000 MRPL12P52815 198 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms