RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485	MTMR1	Q13613	665 aa		12.2	□□□□□ -0.46
PFKM-223	ENST00000551485	AAMP	Q13685	434 aa		12.2	□□□□□ -0.46
PFKM-223	ENST00000551485	NCOA7	Q8NI08	942 aa		12.2	□□□□□ -0.46
PFKM-223	ENST00000551485	SUSD6	Q92537	303 aa		12.2	□□□□□ -0.46
PFKM-223	ENST00000551485	PCYT2	Q99447	389 aa		12.2	□□□□□ -0.46
PFKM-223	ENST00000551485	MAP3K14	Q99558	947 aa		12.2	□□□□□ -0.46
PFKM-223	ENST00000551485	TLE6	Q9H808	572 aa		12.2	□□□□□ -0.46
PFKM-223	ENST00000551485	PKD2L1	Q9P0L9	805 aa		12.2	□□□□□ -0.46
PFKM-223	ENST00000551485	SEC63	Q9UGP8	760 aa	Known RBP	12.2	□□□□□ -0.46
PFKM-223	ENST00000551485	LRFN2	Q9ULH4	789 aa		12.2	□□□□□ -0.46
PFKM-223	ENST00000551485	PCDHA2	Q9Y5H9	948 aa		12.2	□□□□□ -0.46
PFKM-223	ENST00000551485	UBIAD1	Q9Y5Z9	338 aa		12.2	□□□□□ -0.46
PFKM-223	ENST00000551485	TAF6L	Q9Y6J9	622 aa		12.2	□□□□□ -0.46
PFKM-223	ENST00000551485	KDM3A	Q9Y4C1	1321 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	DDAH1	O94760	285 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	ATF7	P17544	494 aa	Predicted RBP	12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	SMARCA1	P28370	1054 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	VCP	P55072	806 aa	Known RBP	12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	ANTXR2	P58335	489 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	UBE3A	Q05086	875 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	TMEM62	Q0P6H9	643 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	ZNF654	Q8IZM8	581 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	VN1R2	Q8NFZ6	395 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	CTCFL	Q8NI51	663 aa	Predicted RBP	12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	IGDCC4	Q8TDY8	1250 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	ATP8B4	Q8TF62	1192 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	ASIC4	Q96FT7	647 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	RPGRIP1	Q96KN7	1286 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	MYL10	Q9BUA6	226 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	CELF4	Q9BZC1	486 aa	Known RBP	12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	TMX1	Q9H3N1	280 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	PSTPIP2	Q9H939	334 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	JPH1	Q9HDC5	661 aa	Predicted RBP	12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	JADE2	Q9NQC1	790 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	TRPC6	Q9Y210	931 aa		12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	12.19	□□□□□ -0.46
PFKM-223	ENST00000551485	FSD2	A1L4K1	749 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485		E7EWF7	191 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	PER2	O15055	1255 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	MAFG	O15525	162 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	GFRA3	O60609	400 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	PPFIA3	O75145	1194 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	IGHD	P01880	384 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	KIF5B	P33176	963 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	SARS	P49591	514 aa	Known RBP	12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	RBM10	P98175	930 aa	Known RBP	12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	KRT76	Q01546	638 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	PTH1R	Q03431	593 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	UBE2S	Q16763	222 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	DUSP6	Q16828	381 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	TMEM266	Q2M3C6	531 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	SPOUT1	Q5T280	376 aa	Known RBP	12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	MICAL1	Q8TDZ2	1067 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	TRAPPC12	Q8WVT3	735 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	TNPO1	Q92973	898 aa	Known RBP	12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	NEK1	Q96PY6	1258 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	CDCA3	Q99618	268 aa	Predicted RBP	12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	LZTS2	Q9BRK4	669 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	AZI2	Q9H6S1	392 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	TLR9	Q9NR96	1032 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	AAAS	Q9NRG9	546 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	FAM86C1	Q9NVL1	165 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	PCDHB12	Q9Y5F1	795 aa		12.18	□□□□□ -0.46
PFKM-223	ENST00000551485	RIF1	Q5UIP0	2472 aa	Known RBP	12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	SMIM35	A0A1B0GVV1	85 aa		12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	FGF18	O76093	207 aa		12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	PLEKHA8P1	O95397	391 aa		12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	IBSP	P21815	317 aa	Predicted RBP	12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	GNAQ	P50148	359 aa		12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	NFX1	Q12986	1120 aa	Known RBP	12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	PLCB4	Q15147	1175 aa		12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	PTPN21	Q16825	1174 aa		12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	NME8	Q8N427	588 aa		12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	SRBD1	Q8N5C6	995 aa	Known RBP	12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	LY9	Q9HBG7	655 aa		12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	ERVK-5	Q9HDB9	667 aa		12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	SLC9A2	Q9UBY0	812 aa		12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	PCDHB7	Q9Y5E2	793 aa		12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	SPTBN4	Q9H254	2564 aa		12.17	□□□□□ -0.46
PFKM-223	ENST00000551485	MYO15A	Q9UKN7	3530 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	SPDYE3	A6NKU9	549 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	TBKBP1	A7MCY6	615 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	FSCN2	O14926	492 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	MGEA5	O60502	916 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	GSPT1	P15170	499 aa	Known RBP	12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	AVPR2	P30518	371 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	STAT5B	P51692	787 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	ERVFC1	P60507	584 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	ACTR2	P61160	394 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	PDE12	Q6L8Q7	609 aa	Known RBP	12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	MTHFD1L	Q6UB35	978 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	PLPPR4	Q7Z2D5	763 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	THNSL1	Q8IYQ7	743 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	COLGALT1	Q8NBJ5	622 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	RUFY2	Q8WXA3	655 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	IRF2BPL	Q9H1B7	796 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	C1orf112	Q9NSG2	853 aa		12.16	□□□□□ -0.46
PFKM-223	ENST00000551485	HCST	Q9UBK5	93 aa		12.16	□□□□□ -0.46

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