RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 ANKRD20A1Q5TYW2 823 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 ANKRD20A3Q5VUR7 823 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 GLG1Q92896 1179 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 CORO1CQ9ULV4 474 aaPredicted RBP13.32□□□□□ -0.28
ERBB3-219ENST00000551242 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.32□□□□□ -0.28
ERBB3-219ENST00000551242 CCDC188H7C350 402 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 RGS16O15492 202 aaPredicted RBP13.32□□□□□ -0.28
ERBB3-219ENST00000551242 CYTH3O43739 400 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 FGGP02679 453 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 PLTPP55058 493 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 EIF3BP55884 814 aaKnown RBP13.32□□□□□ -0.28
ERBB3-219ENST00000551242 PRPF4BQ13523 1007 aaKnown RBP13.32□□□□□ -0.28
ERBB3-219ENST00000551242 TRIM68Q6AZZ1 485 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 NELFCDQ8IXH7 590 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 TPCN2Q8NHX9 752 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 MGARPQ8TDB4 240 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 ZNF384Q8TF68 577 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 TSG101Q99816 390 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 FGFBP2Q9BYJ0 223 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 TXLNGYQ9BZA5 131 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 ZMYND12Q9H0C1 365 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 SLITRK6Q9H5Y7 841 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 SH3GLB2Q9NR46 395 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 FAM114A2Q9NRY5 505 aa13.32□□□□□ -0.28
ERBB3-219ENST00000551242 PCDH11XQ9BZA7 1347 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 PCDH11YQ9BZA8 1340 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 GOLGA8HP0CJ92 632 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 CCND1P24385 295 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 BLMHQ13867 455 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 SLC29A2Q14542 456 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 EPS8L3Q8TE67 593 aaKnown RBP13.31□□□□□ -0.28
ERBB3-219ENST00000551242 SEC14L1Q92503 715 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 LARP4BQ92615 738 aaKnown RBP13.31□□□□□ -0.28
ERBB3-219ENST00000551242 DDX12PQ92771 950 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 PNMA5Q96PV4 448 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 BRIP1Q9BX63 1249 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 FGFR1OP2Q9NVK5 253 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.31□□□□□ -0.28
ERBB3-219ENST00000551242 TRPM3Q9HCF6 1732 aaPredicted RBP13.31□□□□□ -0.28
ERBB3-219ENST00000551242 STXBP3O00186 592 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 SNX3O60493 162 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 PMS2P54278 862 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 EVA1CP58658 441 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 DENND2CQ68D51 928 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 ALKBH5Q6P6C2 394 aaKnown RBP13.31□□□□□ -0.28
ERBB3-219ENST00000551242 KCNK18Q7Z418 384 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 PNMA1Q8ND90 353 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 NUDT12Q9BQG2 462 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 AIPL1Q9NZN9 384 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 ADAM22Q9P0K1 906 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 KAT6BQ8WYB5 2073 aa13.31□□□□□ -0.28
ERBB3-219ENST00000551242 PLCH1Q4KWH8 1693 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 FKBP3Q00688 224 aaKnown RBP13.3□□□□□ -0.28
ERBB3-219ENST00000551242 POU5F1Q01860 360 aaKnown RBP13.3□□□□□ -0.28
ERBB3-219ENST00000551242 NEK9Q8TD19 979 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 CNKSR1Q969H4 720 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 MLXIPLQ9NP71 852 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 NAGPAQ9UK23 515 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 DBR1Q9UK59 544 aaKnown RBP13.3□□□□□ -0.28
ERBB3-219ENST00000551242 SNX24Q9Y343 169 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 UBR2Q8IWV8 1755 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 PVALEFA0A1B0GWK0 134 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 POTEMA6NI47 508 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 SLMAPQ14BN4 828 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 IRF2BP2Q7Z5L9 587 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 MYOCDQ8IZQ8 938 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 FBXO25Q8TCJ0 367 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 CDK5RAP3Q96JB5 506 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 PABPC3Q9H361 631 aaKnown RBP13.3□□□□□ -0.28
ERBB3-219ENST00000551242 SEMA4AQ9H3S1 761 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 ZDHHC18Q9NUE0 388 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 ETAA1Q9NY74 926 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 MYH3P11055 1940 aa13.3□□□□□ -0.28
ERBB3-219ENST00000551242 IRF6O14896 467 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 ATP2A2P16615 1042 aaKnown RBP13.29□□□□□ -0.28
ERBB3-219ENST00000551242 EPS15P42566 896 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 MSH2P43246 934 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 COPS2P61201 443 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 TAF11Q15544 211 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 GNPTABQ3T906 1256 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 SLC17A8Q8NDX2 589 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 PGM2Q96G03 612 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 OSBPL1AQ9BXW6 950 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 GANQ9H2C0 597 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 ERVK-5Q9HDB9 667 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 BARHL2Q9NY43 387 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 CCDC169A6NNP5 214 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 SNUPNO95149 360 aaKnown RBP13.29□□□□□ -0.28
ERBB3-219ENST00000551242 SLC9A1P19634 815 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 FAM43BQ6ZT52 329 aaPredicted RBP13.29□□□□□ -0.28
ERBB3-219ENST00000551242 RASGEF1CQ8N431 466 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 IL17RBQ9NRM6 502 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 HOMER3Q9NSC5 361 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 MAD2L2Q9UI95 211 aa13.29□□□□□ -0.28
ERBB3-219ENST00000551242 ANKRD33BA6NCL7 494 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 TCP11X1B4DZS4 312 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 MPHOSPH10O00566 681 aaKnown RBP13.28□□□□□ -0.28
ERBB3-219ENST00000551242 NUDT17P0C025 328 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 NAPAP54920 295 aa13.28□□□□□ -0.28
ERBB3-219ENST00000551242 DR1Q01658 176 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms