RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 KCNH7Q9NS40 1196 aa11.02□□□□□ -0.64
RAB5B-206ENST00000549505 WRAP73Q9P2S5 460 aaPredicted RBP11.02□□□□□ -0.64
RAB5B-206ENST00000549505 UNCXA6NJT0 531 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 NKRFO15226 690 aaKnown RBP eCLIP11.02□□□□□ -0.65
RAB5B-206ENST00000549505 TGFB1I1O43294 461 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 TADA3O75528 432 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 ICAM3P32942 547 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 HIRAP54198 1017 aaPredicted RBP11.02□□□□□ -0.65
RAB5B-206ENST00000549505 ITGB3BPQ13352 177 aaPredicted RBP11.02□□□□□ -0.65
RAB5B-206ENST00000549505 PTPN21Q16825 1174 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 SUPT20HL1Q3ZLR7 823 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 MUM1L1Q5H9M0 696 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 ZNF746Q6NUN9 644 aaPredicted RBP11.02□□□□□ -0.65
RAB5B-206ENST00000549505 ZNF572Q7Z3I7 529 aaPredicted RBP11.02□□□□□ -0.65
RAB5B-206ENST00000549505 SFR1Q86XK3 245 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 WDR24Q96S15 920 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 FEZ1Q99689 392 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 ZC3H4Q9UPT8 1303 aaKnown RBP11.02□□□□□ -0.65
RAB5B-206ENST00000549505 NPHP3-ACAD11A0A0J9YXS1 232 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 H2AFXP16104 143 aaPredicted RBP11.02□□□□□ -0.65
RAB5B-206ENST00000549505 TAL1P17542 331 aaPredicted RBP11.02□□□□□ -0.65
RAB5B-206ENST00000549505 CYLC1P35663 651 aaPredicted RBP11.02□□□□□ -0.65
RAB5B-206ENST00000549505 CASP5P51878 434 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 RTP1P59025 263 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 MTMR2Q13614 643 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 HGSNATQ68CP4 663 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 UPF1Q92900 1129 aaKnown RBP eCLIP11.02□□□□□ -0.653e-9■■□□□ 13.3
RAB5B-206ENST00000549505 TSGA10Q9BZW7 698 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 ZSWIM4Q9H7M6 989 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 BCS1LQ9Y276 419 aa11.02□□□□□ -0.65
RAB5B-206ENST00000549505 CETN3O15182 167 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 STBD1O95210 358 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 IDEP14735 1019 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 RPL13P26373 211 aaKnown RBP11.01□□□□□ -0.65
RAB5B-206ENST00000549505 CASQ1P31415 396 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 KRT76Q01546 638 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 PDCL2Q8N4E4 241 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 EHBP1Q8NDI1 1231 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 L3MBTL3Q96JM7 780 aaPredicted RBP11.01□□□□□ -0.65
RAB5B-206ENST00000549505 IWS1Q96ST2 819 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 CHP1Q99653 195 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 BHMT2Q9H2M3 363 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 AGPAT5Q9NUQ2 364 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 ZNF215Q9UL58 517 aaPredicted RBP11.01□□□□□ -0.65
RAB5B-206ENST00000549505 WDR81Q562E7 1941 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 LOC102724159A0A0B4J2E5 919 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 ANO9A1A5B4 782 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 PRLRP16471 622 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 PABPC4Q13310 644 aaKnown RBP eCLIP11.01□□□□□ -0.65
RAB5B-206ENST00000549505 COG2Q14746 738 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 PPP2R5AQ15172 486 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 PWP2Q15269 919 aaKnown RBP11.01□□□□□ -0.65
RAB5B-206ENST00000549505 PAPD7Q5XG87 772 aaKnown RBP11.01□□□□□ -0.65
RAB5B-206ENST00000549505 STXBP4Q6ZWJ1 553 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 IL31RAQ8NI17 732 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 TRPM4Q8TD43 1214 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 NHEJ1Q9H9Q4 299 aaPredicted RBP11.01□□□□□ -0.65
RAB5B-206ENST00000549505 PARVGQ9HBI0 331 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 PDLIM7Q9NR12 457 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 RGL1Q9NZL6 768 aa11.01□□□□□ -0.65
RAB5B-206ENST00000549505 RAD21O60216 631 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 USP2O75604 605 aaPredicted RBP11□□□□□ -0.65
RAB5B-206ENST00000549505 PRKCIP41743 596 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 RPS6P62753 249 aaKnown RBP11□□□□□ -0.65
RAB5B-206ENST00000549505 R3HDM1Q15032 1099 aaKnown RBP11□□□□□ -0.65
RAB5B-206ENST00000549505 TBC1D10BQ4KMP7 808 aaPredicted RBP11□□□□□ -0.65
RAB5B-206ENST00000549505 DAW1Q8N136 415 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 CHST13Q8NET6 341 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 NTPCRQ9BSD7 190 aaKnown RBP11□□□□□ -0.65
RAB5B-206ENST00000549505 C17orf75Q9HAS0 396 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 KIF5CO60282 957 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 GFPT2O94808 682 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 ATG7O95352 703 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 ABCD1P33897 745 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 NCKAP1LP55160 1127 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 ADAM9Q13443 819 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 LRRC41Q15345 812 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 ANGEL2Q5VTE6 544 aaKnown RBP11□□□□□ -0.65
RAB5B-206ENST00000549505 SMAP1Q8IYB5 467 aaPredicted RBP11□□□□□ -0.65
RAB5B-206ENST00000549505 DNERQ8NFT8 737 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 NLGN2Q8NFZ4 835 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 TRERF1Q96PN7 1200 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 PICK1Q9NRD5 415 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 ADARB2Q9NS39 739 aaKnown RBP11□□□□□ -0.65
RAB5B-206ENST00000549505 HOXC10Q9NYD6 342 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 SCN4AP35499 1836 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 VAV2P52735 878 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 JAM2P57087 298 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 TXLNBQ8N3L3 684 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 TAAR1Q96RJ0 339 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 LXNQ9BS40 222 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 ARHGAP20Q9P2F6 1191 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 SNCAIPQ9Y6H5 919 aa11□□□□□ -0.65
RAB5B-206ENST00000549505 TRAF5O00463 557 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 EPHB6O15197 1021 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 TBCAO75347 108 aaKnown RBP10.99□□□□□ -0.65
RAB5B-206ENST00000549505 NR3C1P04150 777 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 MYBP10242 640 aa10.99□□□□□ -0.65
RAB5B-206ENST00000549505 TRIM21P19474 475 aaKnown RBP10.99□□□□□ -0.65
RAB5B-206ENST00000549505 EDNRBP24530 442 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms