RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 RETREG2Q8NC44 543 aa10.79□□□□□ -0.68
RAB5B-205ENST00000549034 BBXQ8WY36 941 aaPredicted RBP10.79□□□□□ -0.68
RAB5B-205ENST00000549034 DYDC2Q96IM9 177 aa10.79□□□□□ -0.68
RAB5B-205ENST00000549034 LBHD1Q9BQE6 289 aaPredicted RBP10.79□□□□□ -0.68
RAB5B-205ENST00000549034 PPP1R12CQ9BZL4 782 aa10.79□□□□□ -0.68
RAB5B-205ENST00000549034 EVPLQ92817 2033 aa10.79□□□□□ -0.68
RAB5B-205ENST00000549034 DKC1O60832 514 aaKnown RBP eCLIP10.78□□□□□ -0.68
RAB5B-205ENST00000549034 SLITRK3O94933 977 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 TIMP1P01033 207 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 ZSCAN22P10073 491 aaPredicted RBP10.78□□□□□ -0.68
RAB5B-205ENST00000549034 KLRC1P26715 233 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 QARSP47897 775 aaKnown RBP10.78□□□□□ -0.68
RAB5B-205ENST00000549034 CCL23P55773 120 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 MDM2Q00987 491 aaPredicted RBP10.78□□□□□ -0.68
RAB5B-205ENST00000549034 PTK7Q13308 1070 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 CTTNQ14247 550 aaKnown RBP10.78□□□□□ -0.68
RAB5B-205ENST00000549034 SF3A1Q15459 793 aaKnown RBP10.78□□□□□ -0.68
RAB5B-205ENST00000549034 GRIK4Q16099 956 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 UGCGQ16739 394 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 FOXD4L6Q3SYB3 417 aaPredicted RBP10.78□□□□□ -0.68
RAB5B-205ENST00000549034 ZNF484Q5JVG2 852 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 FOXD4L3Q6VB84 417 aaPredicted RBP10.78□□□□□ -0.68
RAB5B-205ENST00000549034 ATP8B4Q8TF62 1192 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 BADQ92934 168 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 EIF2AK1Q9BQI3 630 aaKnown RBP10.78□□□□□ -0.68
RAB5B-205ENST00000549034 HIPK3Q9H422 1215 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 RGL1Q9NZL6 768 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 CEP131Q9UPN4 1083 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 CLIC4Q9Y696 253 aa10.78□□□□□ -0.68
RAB5B-205ENST00000549034 A0A087WWV3 80 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 POTEMA6NI47 508 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 LAD1O00515 517 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 ZNF862O60290 1169 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 OATP04181 439 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 ITGB8P26012 769 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 CYP2C18P33260 490 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 ATP2C1P98194 919 aaPredicted RBP10.77□□□□□ -0.69
RAB5B-205ENST00000549034 CYP4A11Q02928 519 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 SPIRE1Q08AE8 756 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 BFSP2Q13515 415 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 PKP1Q13835 747 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 PDIA5Q14554 519 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 IL17AQ16552 155 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 XKR3Q5GH77 459 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 MARCH8Q5T0T0 291 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 MTHFD1LQ6UB35 978 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 TMEM199Q8N511 208 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 LMBR1Q8WVP7 490 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 TRAPPC12Q8WVT3 735 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 ZBTB10Q96DT7 871 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 FAM167AQ96KS9 214 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 ZNF396Q96N95 335 aaPredicted RBP10.77□□□□□ -0.69
RAB5B-205ENST00000549034 RAB34Q9BZG1 259 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 ZSWIM4Q9H7M6 989 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 TFIP11Q9UBB9 837 aaKnown RBP10.77□□□□□ -0.69
RAB5B-205ENST00000549034 LRWD1Q9UFC0 647 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 TBX21Q9UL17 535 aa10.77□□□□□ -0.69
RAB5B-205ENST00000549034 VWA3AA6NCI4 1184 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 F13A1P00488 732 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 ANP32AP39687 249 aaKnown RBP10.76□□□□□ -0.69
RAB5B-205ENST00000549034 THPOP40225 353 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 PRPHP41219 470 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 ADAM17P78536 824 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 PRKCEQ02156 737 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 MTERF2Q49AM1 385 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 MFSD5Q6N075 450 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 OTUD6AQ7L8S5 288 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 CCDC155Q8N6L0 562 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 ERMNQ8TAM6 284 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 CTAGE1Q96RT6 745 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 HSD17B14Q9BPX1 270 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 SH2D3AQ9BRG2 576 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 NOC4LQ9BVI4 516 aaKnown RBP10.76□□□□□ -0.69
RAB5B-205ENST00000549034 NIFKQ9BYG3 293 aaKnown RBP10.76□□□□□ -0.69
RAB5B-205ENST00000549034 SEPT9Q9UHD8 586 aaPredicted RBP10.76□□□□□ -0.69
RAB5B-205ENST00000549034 UMODL1Q5DID0 1318 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 IGSF9BQ9UPX0 1349 aa10.76□□□□□ -0.69
RAB5B-205ENST00000549034 TMEM150BA6NC51 233 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 ZBTB39O15060 712 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 MAGEB2O15479 319 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 STBD1O95210 358 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 BMP15O95972 392 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 IQCF3P0C7M6 154 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 CKBP12277 381 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 MARCKSP29966 332 aaPredicted RBP10.75□□□□□ -0.69
RAB5B-205ENST00000549034 CDC25AP30304 524 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 HOXC8P31273 242 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 CCT6AP40227 531 aaKnown RBP10.75□□□□□ -0.69
RAB5B-205ENST00000549034 MAGEA10P43363 369 aaPredicted RBP10.75□□□□□ -0.69
RAB5B-205ENST00000549034 ZNF618Q5T7W0 954 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 ARL6IP4Q66PJ3 421 aaKnown RBP10.75□□□□□ -0.69
RAB5B-205ENST00000549034 EFCAB12Q6NXP0 572 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 RUFY4Q6ZNE9 571 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 RSPH3Q86UC2 560 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 SERINC5Q86VE9 423 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 CATSPER3Q86XQ3 398 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 C4orf19Q8IY42 314 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 METTL13Q8N6R0 699 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 CAGE1Q8TC20 777 aa10.75□□□□□ -0.69
RAB5B-205ENST00000549034 NEK9Q8TD19 979 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms