RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 ATL3Q6DD88 541 aa13.18□□□□□ -0.3
TUBA1C-203ENST00000548470 FAM43BQ6ZT52 329 aaPredicted RBP13.18□□□□□ -0.3
TUBA1C-203ENST00000548470 RPAINQ86UA6 219 aa13.18□□□□□ -0.3
TUBA1C-203ENST00000548470 SERINC5Q86VE9 423 aa13.18□□□□□ -0.3
TUBA1C-203ENST00000548470 SLC5A5Q92911 643 aa13.18□□□□□ -0.3
TUBA1C-203ENST00000548470 LENG9Q96B70 501 aa13.18□□□□□ -0.3
TUBA1C-203ENST00000548470 SCAND2PQ9GZW5 306 aaPredicted RBP13.18□□□□□ -0.3
TUBA1C-203ENST00000548470 FBXO2Q9UK22 296 aaPredicted RBP13.18□□□□□ -0.3
TUBA1C-203ENST00000548470 PCDHA7Q9UN72 937 aa13.18□□□□□ -0.3
TUBA1C-203ENST00000548470 PCDHA10Q9Y5I2 948 aa13.18□□□□□ -0.3
TUBA1C-203ENST00000548470 ALPK3Q96L96 1907 aa13.17□□□□□ -0.3
TUBA1C-203ENST00000548470 WDR64B1ANS9 1081 aa13.17□□□□□ -0.3
TUBA1C-203ENST00000548470 MSH4O15457 936 aa13.17□□□□□ -0.3
TUBA1C-203ENST00000548470 OR52Z1P0C646 297 aa13.17□□□□□ -0.3
TUBA1C-203ENST00000548470 SELPP16109 830 aa13.17□□□□□ -0.3
TUBA1C-203ENST00000548470 ADAM17P78536 824 aa13.17□□□□□ -0.3
TUBA1C-203ENST00000548470 SHHQ15465 462 aa13.17□□□□□ -0.3
TUBA1C-203ENST00000548470 SPECC1Q5M775 1068 aa13.17□□□□□ -0.3
TUBA1C-203ENST00000548470 TAF2Q6P1X5 1199 aa13.17□□□□□ -0.3
TUBA1C-203ENST00000548470 DNAH12Q6ZR08 3092 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 VWA3AA6NCI4 1184 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 PP2D1A8MPX8 630 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 HBP1O60381 514 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 GAS7O60861 476 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 CCNE2O96020 404 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 CKBP12277 381 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 ACTN1P12814 892 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 FXR1P51114 621 aaKnown RBP eCLIP13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 JAK3P52333 1124 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 CCL23P55773 120 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 CALCRLQ16602 461 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 TMEM240Q5SV17 173 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 LRCH2Q5VUJ6 765 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 RSPH3Q86UC2 560 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 KCNG4Q8TDN1 519 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 HERVK_113Q902F9 699 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 HAS1Q92839 578 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 CTAGE1Q96RT6 745 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 PCYT2Q99447 389 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 TEKT3Q9BXF9 490 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 WNT8AQ9H1J5 351 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 GOLPH3LQ9H4A5 285 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 ZNF302Q9NR11 478 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 SETD4Q9NVD3 440 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 CEP131Q9UPN4 1083 aa13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 MAFBQ9Y5Q3 323 aaPredicted RBP13.16□□□□□ -0.3
TUBA1C-203ENST00000548470 PDE4DIPQ5VU43 2346 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 POTEB3A0JP26 581 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 MBLAC1A4D2B0 266 aaPredicted RBP13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 DDX11L8A8MPP1 907 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 GOLGA6L22H0YM25 854 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 BACH1O14867 736 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 PSMD10O75832 226 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 TXKP42681 527 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 EPHB4P54760 987 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 SMAD3P84022 425 aaKnown RBP13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 PPFIA1Q13136 1202 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 ORC2Q13416 577 aaPredicted RBP13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 TRIM71Q2Q1W2 868 aaKnown RBP13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 ZNF484Q5JVG2 852 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 RASIP1Q5U651 963 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 SWSAP1Q6NVH7 229 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 PDXDC2PQ6P474 469 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 POTEBQ6S5H4 581 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 USP49Q70CQ1 688 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 ZNF365Q70YC5 407 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 LRRC8DQ7L1W4 858 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 C16orf59Q7L2K0 433 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 TRIM50Q86XT4 487 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 SLFN12Q8IYM2 578 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 ZNF710Q8N1W2 664 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 NME8Q8N427 588 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 KRI1Q8N9T8 703 aaKnown RBP13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 ETNPPLQ8TBG4 499 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 FAM167AQ96KS9 214 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 RNPC3Q96LT9 517 aaKnown RBP13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 MTMR9Q96QG7 549 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.15□□□□□ -0.34e-13■■■■□ 23.9
TUBA1C-203ENST00000548470 CSRNP2Q9H175 543 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 KCNMB3Q9NPA1 279 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 NRBP2Q9NSY0 501 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 TELO2Q9Y4R8 837 aa13.15□□□□□ -0.3
TUBA1C-203ENST00000548470 SCN10AQ9Y5Y9 1956 aa13.14□□□□□ -0.31
TUBA1C-203ENST00000548470 WDR81Q562E7 1941 aa13.14□□□□□ -0.31
TUBA1C-203ENST00000548470 RSPH10B2B2RC85 870 aa13.14□□□□□ -0.31
TUBA1C-203ENST00000548470 DDX39AO00148 427 aaKnown RBP13.14□□□□□ -0.31
TUBA1C-203ENST00000548470 TREHO43280 583 aa13.14□□□□□ -0.31
TUBA1C-203ENST00000548470 MARCH6O60337 910 aa13.14□□□□□ -0.31
TUBA1C-203ENST00000548470 DKC1O60832 514 aaKnown RBP eCLIP13.14□□□□□ -0.312e-6■■■■■ 36
TUBA1C-203ENST00000548470 EFCAB14O75071 495 aa13.14□□□□□ -0.31
TUBA1C-203ENST00000548470 PPP6R2O75170 966 aa13.14□□□□□ -0.31
TUBA1C-203ENST00000548470 BMP15O95972 392 aa13.14□□□□□ -0.31
TUBA1C-203ENST00000548470 RSPH10BP0C881 870 aa13.14□□□□□ -0.31
TUBA1C-203ENST00000548470 INSRRP14616 1297 aa13.14□□□□□ -0.31
TUBA1C-203ENST00000548470 LIG1P18858 919 aa13.14□□□□□ -0.31
TUBA1C-203ENST00000548470 PLCB4Q15147 1175 aa13.14□□□□□ -0.31
TUBA1C-203ENST00000548470 GRIK4Q16099 956 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms