RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, human

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL3-215	ENST00000546102	CBX7	O95931	251 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	CST3	P01034	146 aa	Predicted RBP	4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	FOS	P01100	380 aa	Predicted RBP	4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	APP	P05067	770 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	INHBB	P09529	407 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	IFIT2	P09913	472 aa	Known RBP	4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	ECI1	P42126	302 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	NEK3	P51956	506 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	CTSW	P56202	376 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	ZNF445	P59923	1031 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	HSP90AB4P	Q58FF6	505 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	NOL9	Q5SY16	702 aa	Known RBP	4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	ABHD17C	Q6PCB6	329 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	KCNT2	Q6UVM3	1135 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	C22orf34	Q6ZV56	151 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	TTLL10	Q6ZVT0	673 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	FKBP9P1	Q75LS8	142 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	DDX53	Q86TM3	631 aa	Known RBP	4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	CBARP	Q8N350	705 aa	Predicted RBP	4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	USP33	Q8TEY7	942 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	UBE2F	Q969M7	185 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	KRTAP4-11	Q9BYQ6	195 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	SLAMF8	Q9P0V8	285 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	ZSWIM5	Q9P217	1185 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	PNMA2	Q9UL42	364 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	EVC2	Q86UK5	1308 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	PTCH1	Q13635	1447 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	FAM135B	Q49AJ0	1406 aa		4.37	□□□□□ -1.71
CUL3-215	ENST00000546102	AQP7	O14520	342 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	VAMP4	O75379	141 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	SLITRK5	O94991	958 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	PF4V1	P10720	104 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	KCNA6	P17658	529 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	HOXC12	P31275	282 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	KIR3DL1	P43629	444 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	CEBPA	P49715	358 aa	Predicted RBP	4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	IRX6	P78412	446 aa	Predicted RBP	4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	PURA	Q00577	322 aa	Known RBP	4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	GUCY1A3	Q02108	690 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	ATP13A4	Q4VNC1	1196 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	SLC35F1	Q5T1Q4	408 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	MTDH	Q86UE4	582 aa	Known RBP	4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	AMIGO3	Q86WK7	504 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	FIBCD1	Q8N539	461 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	SMC1B	Q8NDV3	1235 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	PPP1R13L	Q8WUF5	828 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	MYLIP	Q8WY64	445 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	E2F7	Q96AV8	911 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	C1orf159	Q96HA4	380 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	MENT	Q9BUN1	341 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	NKX2-4	Q9H2Z4	354 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	VTA1	Q9NP79	307 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	PRDM11	Q9NQV5	511 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	CYP26B1	Q9NR63	512 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	GNL3L	Q9NVN8	582 aa	Known RBP	4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	USP25	Q9UHP3	1055 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	TAGLN3	Q9UI15	199 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	ZBTB21	Q9ULJ3	1066 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	PCDHB12	Q9Y5F1	795 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	PCDHA8	Q9Y5H6	950 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	ABCC11	Q96J66	1382 aa		4.36	□□□□□ -1.71
CUL3-215	ENST00000546102	XRN1	Q8IZH2	1706 aa	Known RBP	4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	KRTAP9-7	A8MTY7	169 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	PRR33	A8MZF0	331 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	CBX4	O00257	560 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	GAS7	O60861	476 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	MED14OS	P0DP75	135 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	TRIM27	P14373	513 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	GLDC	P23378	1020 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	CAP2	P40123	477 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	ERVK-21	P61565	698 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	RNF4	P78317	190 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	DSG1	Q02413	1049 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	DPY19L1	Q2PZI1	675 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	MINDY4	Q4G0A6	757 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	ZFYVE27	Q5T4F4	411 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	TMEM132E	Q6IEE7	984 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	STYK1	Q6J9G0	422 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	LETMD1	Q6P1Q0	360 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	TMPRSS7	Q7RTY8	843 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	PNMA8A	Q86V59	439 aa	Predicted RBP	4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	KIF18B	Q86Y91	864 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	SPICE1	Q8N0Z3	855 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	IGSF22	Q8N9C0	903 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	DCAF4	Q8WV16	495 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	CLIP3	Q96DZ5	547 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	LRGUK	Q96M69	825 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	CCDC140	Q96MF4	163 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	KREMEN1	Q96MU8	473 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	ZDHHC15	Q96MV8	337 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	ORAI3	Q9BRQ5	295 aa		4.35	□□□□□ -1.71
CUL3-215	ENST00000546102	SARG	Q9BW04	601 aa		4.35	□□□□□ -1.71

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