RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 CDC25AP30304 524 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 CTTNQ14247 550 aaKnown RBP12.05□□□□□ -0.48
PAAF1-216ENST00000546039 MFSD10Q14728 455 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 XKR3Q5GH77 459 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 SPECC1Q5M775 1068 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 SHC4Q6S5L8 630 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 CATSPER3Q86XQ3 398 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 TPH2Q8IWU9 490 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 CKAP2LQ8IYA6 745 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 RASSF8Q8NHQ8 419 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 ATP8B4Q8TF62 1192 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 KAT2BQ92831 832 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 ABHD8Q96I13 439 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 EPSTI1Q96J88 318 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 GLT1D1Q96MS3 346 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 PYM1Q9BRP8 204 aaKnown RBP12.05□□□□□ -0.48
PAAF1-216ENST00000546039 CCDC39Q9UFE4 941 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 COL1A2P08123 1366 aa12.05□□□□□ -0.48
PAAF1-216ENST00000546039 TANC1Q9C0D5 1861 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 HBP1O60381 514 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 CMA1P23946 247 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 MARK3P27448 753 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 GRB10Q13322 594 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 KARSQ15046 597 aaKnown RBP12.04□□□□□ -0.48
PAAF1-216ENST00000546039 PLCB4Q15147 1175 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 KIAA0753Q2KHM9 967 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 TMEM119Q4V9L6 283 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 POTEGQ6S5H5 508 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 USP49Q70CQ1 688 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 TNS4Q8IZW8 715 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
PAAF1-216ENST00000546039 MRPS27Q92552 414 aaKnown RBP12.04□□□□□ -0.48
PAAF1-216ENST00000546039 NACC1Q96RE7 527 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 SEZ6LQ9BYH1 1024 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 STARD7Q9NQZ5 370 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 ANKEF1Q9NU02 776 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 DDX19AQ9NUU7 478 aaKnown RBP12.04□□□□□ -0.48
PAAF1-216ENST00000546039 SEPT9Q9UHD8 586 aaPredicted RBP12.04□□□□□ -0.48
PAAF1-216ENST00000546039 TRPC6Q9Y210 931 aa12.04□□□□□ -0.48
PAAF1-216ENST00000546039 SIP14410 1827 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 A0A0U1RQG5 324 aaPredicted RBP12.03□□□□□ -0.48
PAAF1-216ENST00000546039 FAM237AA0A1B0GTK4 181 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 XRCC6P12956 609 aaKnown RBP eCLIP12.03□□□□□ -0.48
PAAF1-216ENST00000546039 PLCG1P19174 1290 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 ATP4AP20648 1035 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 YWHABP31946 246 aaKnown RBP12.03□□□□□ -0.48
PAAF1-216ENST00000546039 MNX1P50219 401 aaPredicted RBP12.03□□□□□ -0.48
PAAF1-216ENST00000546039 UBE2HP62256 183 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 ZRSR1Q15695 479 aaKnown RBP12.03□□□□□ -0.48
PAAF1-216ENST00000546039 ECM1Q16610 540 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 CCDC73Q6ZRK6 1079 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 OTUD6AQ7L8S5 288 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 SESTD1Q86VW0 696 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 FSIP1Q8NA03 581 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 VTI1AQ96AJ9 217 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 CCDC43Q96MW1 224 aaKnown RBP12.03□□□□□ -0.48
PAAF1-216ENST00000546039 PNMA5Q96PV4 448 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 NRBP2Q9NSY0 501 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 WRAP73Q9P2S5 460 aaPredicted RBP12.03□□□□□ -0.48
PAAF1-216ENST00000546039 STK17AQ9UEE5 414 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 DBR1Q9UK59 544 aaKnown RBP12.03□□□□□ -0.48
PAAF1-216ENST00000546039 KIAA1024Q9UPX6 916 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 DNM3Q9UQ16 869 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 PPME1Q9Y570 386 aa12.03□□□□□ -0.48
PAAF1-216ENST00000546039 DDX11L8A8MPP1 907 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 STBD1O95210 358 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 EYA4O95677 639 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 SMIM10L2AP0DMW4 78 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 SMIM10L2BP0DMW5 78 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 COL6A1P12109 1028 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 PFKFB1P16118 471 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 STAT6P42226 847 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 PTPN11Q06124 597 aaPredicted RBP12.02□□□□□ -0.49
PAAF1-216ENST00000546039 PPFIA1Q13136 1202 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 ITGA7Q13683 1181 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 NBPF20Q3BBV1 942 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 ZNF484Q5JVG2 852 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 RRAGBQ5VZM2 374 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 NFRKBQ6P4R8 1299 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 ANO5Q75V66 913 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 C7orf31Q8N865 590 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 NIFKQ9BYG3 293 aaKnown RBP12.02□□□□□ -0.49
PAAF1-216ENST00000546039 CUEDC2Q9H467 287 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 RNPEPQ9H4A4 650 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 USP25Q9UHP3 1055 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 KCNH3Q9ULD8 1083 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 HPSEQ9Y251 543 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 MROH7Q68CQ1 1323 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 NRCAMQ92823 1304 aa12.02□□□□□ -0.49
PAAF1-216ENST00000546039 A0A1B0GVL5 298 aa12.01□□□□□ -0.49
PAAF1-216ENST00000546039 ARHGEF35A5YM69 484 aa12.01□□□□□ -0.49
PAAF1-216ENST00000546039 RRN3P2A6NIE6 340 aa12.01□□□□□ -0.49
PAAF1-216ENST00000546039 PRPF40AO75400 957 aaKnown RBP12.01□□□□□ -0.49
PAAF1-216ENST00000546039 GNAT1P11488 350 aa12.01□□□□□ -0.49
PAAF1-216ENST00000546039 INSRRP14616 1297 aa12.01□□□□□ -0.49
PAAF1-216ENST00000546039 HOXC8P31273 242 aa12.01□□□□□ -0.49
PAAF1-216ENST00000546039 SYKP43405 635 aa12.01□□□□□ -0.49
PAAF1-216ENST00000546039 CHMP4BP1P59074 171 aa12.01□□□□□ -0.49
PAAF1-216ENST00000546039 PSMC6P62333 389 aa12.01□□□□□ -0.49
PAAF1-216ENST00000546039 GRIK4Q16099 956 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms