RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 USP28Q96RU2 1077 aa22.99■■□□□ 1.27
HMGA2-211ENST00000545998 RGL1Q9NZL6 768 aa22.99■■□□□ 1.27
HMGA2-211ENST00000545998 KIAA0355O15063 1070 aa22.98■■□□□ 1.27
HMGA2-211ENST00000545998 SLITRK3O94933 977 aa22.98■■□□□ 1.27
HMGA2-211ENST00000545998 STBD1O95210 358 aa22.98■■□□□ 1.27
HMGA2-211ENST00000545998 OATP04181 439 aa22.98■■□□□ 1.27
HMGA2-211ENST00000545998 MARCH8Q5T0T0 291 aa22.98■■□□□ 1.27
HMGA2-211ENST00000545998 FAM167AQ96KS9 214 aa22.98■■□□□ 1.27
HMGA2-211ENST00000545998 LXNQ9BS40 222 aa22.98■■□□□ 1.27
HMGA2-211ENST00000545998 PRDM5Q9NQX1 630 aaPredicted RBP22.98■■□□□ 1.27
HMGA2-211ENST00000545998 WRAP73Q9P2S5 460 aaPredicted RBP22.98■■□□□ 1.27
HMGA2-211ENST00000545998 NOD1Q9Y239 953 aa22.98■■□□□ 1.27
HMGA2-211ENST00000545998 RRN3P2A6NIE6 340 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 ZBTB42B2RXF5 422 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 TREHO43280 583 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 CYP2C9P11712 490 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 CYP4A11Q02928 519 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 NEK9Q8TD19 979 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 RAB34Q9BZG1 259 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 LRWD1Q9UFC0 647 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 RBM19Q9Y4C8 960 aaKnown RBP22.97■■□□□ 1.27
HMGA2-211ENST00000545998 LTBP2Q14767 1821 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 COL1A2P08123 1366 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 EVPLQ92817 2033 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 CEBPZQ03701 1054 aaKnown RBP22.97■■□□□ 1.27
HMGA2-211ENST00000545998 CTTNQ14247 550 aaKnown RBP22.97■■□□□ 1.27
HMGA2-211ENST00000545998 XKR3Q5GH77 459 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 TRMT1LQ7Z2T5 733 aaKnown RBP22.97■■□□□ 1.27
HMGA2-211ENST00000545998 SERINC5Q86VE9 423 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 ZNF396Q96N95 335 aaPredicted RBP22.97■■□□□ 1.27
HMGA2-211ENST00000545998 ZSWIM4Q9H7M6 989 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 NRBP2Q9NSY0 501 aa22.97■■□□□ 1.27
HMGA2-211ENST00000545998 ZMYND8Q9ULU4 1186 aaPredicted RBP22.97■■□□□ 1.27
HMGA2-211ENST00000545998 MBLAC1A4D2B0 266 aaPredicted RBP22.96■■□□□ 1.27
HMGA2-211ENST00000545998 VWA3AA6NCI4 1184 aa22.96■■□□□ 1.27
HMGA2-211ENST00000545998 DKC1O60832 514 aaKnown RBP eCLIP22.96■■□□□ 1.27
HMGA2-211ENST00000545998 SPATA31C1P0DKV0 1188 aa22.96■■□□□ 1.27
HMGA2-211ENST00000545998 SYN1P17600 705 aa22.96■■□□□ 1.27
HMGA2-211ENST00000545998 NASPP49321 788 aaPredicted RBP22.96■■□□□ 1.27
HMGA2-211ENST00000545998 IGBP1P78318 339 aa22.96■■□□□ 1.27
HMGA2-211ENST00000545998 PTK7Q13308 1070 aa22.96■■□□□ 1.27
HMGA2-211ENST00000545998 ZNF484Q5JVG2 852 aa22.96■■□□□ 1.27
HMGA2-211ENST00000545998 C4orf19Q8IY42 314 aa22.96■■□□□ 1.27
HMGA2-211ENST00000545998 TRAPPC12Q8WVT3 735 aa22.96■■□□□ 1.27
HMGA2-211ENST00000545998 DHX38Q92620 1227 aaKnown RBP22.96■■□□□ 1.27
HMGA2-211ENST00000545998 DAXXQ9UER7 740 aaPredicted RBP22.96■■□□□ 1.27
HMGA2-211ENST00000545998 PRKAG2Q9UGJ0 569 aa22.96■■□□□ 1.27
HMGA2-211ENST00000545998 MORC2Q9Y6X9 1032 aaPredicted RBP22.96■■□□□ 1.27
HMGA2-211ENST00000545998 ITGB8P26012 769 aa22.95■■□□□ 1.26
HMGA2-211ENST00000545998 FOXD4L6Q3SYB3 417 aaPredicted RBP22.95■■□□□ 1.26
HMGA2-211ENST00000545998 FOXD4L3Q6VB84 417 aaPredicted RBP22.95■■□□□ 1.26
HMGA2-211ENST00000545998 TPH2Q8IWU9 490 aa22.95■■□□□ 1.26
HMGA2-211ENST00000545998 ERMNQ8TAM6 284 aa22.95■■□□□ 1.26
HMGA2-211ENST00000545998 POLR3CQ9BUI4 534 aaPredicted RBP22.95■■□□□ 1.26
HMGA2-211ENST00000545998 NOC4LQ9BVI4 516 aaKnown RBP22.95■■□□□ 1.26
HMGA2-211ENST00000545998 NIFKQ9BYG3 293 aaKnown RBP22.95■■□□□ 1.26
HMGA2-211ENST00000545998 PCDH10Q9P2E7 1040 aa22.95■■□□□ 1.26
HMGA2-211ENST00000545998 TFIP11Q9UBB9 837 aaKnown RBP22.95■■□□□ 1.26
HMGA2-211ENST00000545998 TUBE1Q9UJT0 475 aa22.95■■□□□ 1.26
HMGA2-211ENST00000545998 MED24O75448 989 aa22.94■■□□□ 1.26
HMGA2-211ENST00000545998 LYPLA2O95372 231 aa22.94■■□□□ 1.26
HMGA2-211ENST00000545998 RPA1P27694 616 aa22.94■■□□□ 1.26
HMGA2-211ENST00000545998 SLC39A14Q15043 492 aa22.94■■□□□ 1.26
HMGA2-211ENST00000545998 ANO5Q75V66 913 aa22.94■■□□□ 1.26
HMGA2-211ENST00000545998 CATSPER3Q86XQ3 398 aa22.94■■□□□ 1.26
HMGA2-211ENST00000545998 WNT8BQ93098 351 aa22.94■■□□□ 1.26
HMGA2-211ENST00000545998 HIPK3Q9H422 1215 aa22.94■■□□□ 1.26
HMGA2-211ENST00000545998 TUFT1Q9NNX1 390 aa22.94■■□□□ 1.26
HMGA2-211ENST00000545998 TCHHQ07283 1943 aa22.94■■□□□ 1.26
HMGA2-211ENST00000545998 TMEM150BA6NC51 233 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 DDX11L8A8MPP1 907 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 H0YGN5 161 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 TIMP1P01033 207 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 TARBP2Q15633 366 aaKnown RBP22.93■■□□□ 1.26
HMGA2-211ENST00000545998 TRIM71Q2Q1W2 868 aaKnown RBP22.93■■□□□ 1.26
HMGA2-211ENST00000545998 HAUS3Q68CZ6 603 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 ATL3Q6DD88 541 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 MTHFD1LQ6UB35 978 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 LINC00301Q8NCQ3 95 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 ZBTB10Q96DT7 871 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 SEPT9Q9UHD8 586 aaPredicted RBP22.93■■□□□ 1.26
HMGA2-211ENST00000545998 STK24Q9Y6E0 443 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 ARID2Q68CP9 1835 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 PP2D1A8MPX8 630 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 RAG1P15918 1043 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 MARCKSP29966 332 aaPredicted RBP22.93■■□□□ 1.26
HMGA2-211ENST00000545998 NUCB2P80303 420 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 GRIN1Q05586 938 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 RBL2Q08999 1139 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 RUFY4Q6ZNE9 571 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 CAGE1Q8TC20 777 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 CEP89Q96ST8 783 aa22.93■■□□□ 1.26
HMGA2-211ENST00000545998 FBXO2Q9UK22 296 aaPredicted RBP22.93■■□□□ 1.26
HMGA2-211ENST00000545998 LAMA2P24043 3122 aaKnown RBP22.92■■□□□ 1.26
HMGA2-211ENST00000545998 PITPNM1O00562 1244 aa22.92■■□□□ 1.26
HMGA2-211ENST00000545998 ZBTB39O15060 712 aa22.92■■□□□ 1.26
HMGA2-211ENST00000545998 KLRC1P26715 233 aa22.92■■□□□ 1.26
HMGA2-211ENST00000545998 CDC25AP30304 524 aa22.92■■□□□ 1.26
HMGA2-211ENST00000545998 YWHABP31946 246 aaKnown RBP22.92■■□□□ 1.26
HMGA2-211ENST00000545998 DNM1Q05193 864 aaKnown RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms