RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 BTBD7Q9P203 1132 aa7.23□□□□□ -1.25
SNHG1-224ENST00000545688 SLC4A7Q9Y6M7 1214 aa7.23□□□□□ -1.25
SNHG1-224ENST00000545688 ESYT3A0FGR9 886 aa7.22□□□□□ -1.25
SNHG1-224ENST00000545688 POLD1P28340 1107 aa7.22□□□□□ -1.25
SNHG1-224ENST00000545688 TOP3AQ13472 1001 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-224ENST00000545688 USP10Q14694 798 aaKnown RBP7.22□□□□□ -1.25
SNHG1-224ENST00000545688 DPP8Q6V1X1 898 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-224ENST00000545688 FGD2Q7Z6J4 655 aa7.22□□□□□ -1.25
SNHG1-224ENST00000545688 DNERQ8NFT8 737 aa7.22□□□□□ -1.25
SNHG1-224ENST00000545688 DVL3Q92997 716 aaPredicted RBP7.22□□□□□ -1.25
SNHG1-224ENST00000545688 MRPL4Q9BYD3 311 aaKnown RBP7.22□□□□□ -1.25
SNHG1-224ENST00000545688 CCDC163A0A0D9SF12 145 aa7.21□□□□□ -1.26
SNHG1-224ENST00000545688 SCDO00767 359 aa7.21□□□□□ -1.26
SNHG1-224ENST00000545688 APPP05067 770 aa7.21□□□□□ -1.26
SNHG1-224ENST00000545688 MMEP08473 750 aa7.21□□□□□ -1.26
SNHG1-224ENST00000545688 HERVK_113P62684 666 aa7.21□□□□□ -1.26
SNHG1-224ENST00000545688 IL13RA1P78552 427 aa7.21□□□□□ -1.26
SNHG1-224ENST00000545688 WDR72Q3MJ13 1102 aa7.21□□□□□ -1.26
SNHG1-224ENST00000545688 OVCH1Q7RTY7 1134 aa7.21□□□□□ -1.26
SNHG1-224ENST00000545688 IFNL2Q8IZJ0 200 aa7.21□□□□□ -1.26
SNHG1-224ENST00000545688 CARD11Q9BXL7 1154 aa7.21□□□□□ -1.26
SNHG1-224ENST00000545688 SEC61A2Q9H9S3 476 aa7.21□□□□□ -1.26
SNHG1-224ENST00000545688 GALNT8Q9NY28 637 aa7.21□□□□□ -1.26
SNHG1-224ENST00000545688 TCRBV16S1A1N1A0A5B0 115 aa7.2□□□□□ -1.26
SNHG1-224ENST00000545688 C1QTNF3-AMACRE9PGA6 284 aa7.2□□□□□ -1.26
SNHG1-224ENST00000545688 KCNQ2O43526 872 aa7.2□□□□□ -1.26
SNHG1-224ENST00000545688 CUTAO60888 179 aa7.2□□□□□ -1.26
SNHG1-224ENST00000545688 MPIG6BO95866 241 aa7.2□□□□□ -1.26
SNHG1-224ENST00000545688 KCNA6P17658 529 aa7.2□□□□□ -1.26
SNHG1-224ENST00000545688 ABHD17CQ6PCB6 329 aa7.2□□□□□ -1.26
SNHG1-224ENST00000545688 SREK1Q8WXA9 508 aaKnown RBP7.2□□□□□ -1.26
SNHG1-224ENST00000545688 GNRHR2Q96P88 292 aa7.2□□□□□ -1.26
SNHG1-224ENST00000545688 LRRC37BQ96QE4 947 aa7.2□□□□□ -1.26
SNHG1-224ENST00000545688 AMNQ9BXJ7 453 aa7.2□□□□□ -1.26
SNHG1-224ENST00000545688 NCOA5Q9HCD5 579 aaKnown RBP7.2□□□□□ -1.26
SNHG1-224ENST00000545688 TRIM39Q9HCM9 518 aa7.2□□□□□ -1.26
SNHG1-224ENST00000545688 UCKL1Q9NWZ5 548 aa7.2□□□□□ -1.26
SNHG1-224ENST00000545688 CDK11AQ9UQ88 783 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-224ENST00000545688 PATE3B3GLJ2 98 aa7.19□□□□□ -1.26
SNHG1-224ENST00000545688 ADCY8P40145 1251 aa7.19□□□□□ -1.26
SNHG1-224ENST00000545688 ETV4P43268 484 aa7.19□□□□□ -1.26
SNHG1-224ENST00000545688 RRADP55042 308 aa7.19□□□□□ -1.26
SNHG1-224ENST00000545688 BMS1Q14692 1282 aaKnown RBP7.19□□□□□ -1.26
SNHG1-224ENST00000545688 CDSNQ15517 529 aa7.19□□□□□ -1.26
SNHG1-224ENST00000545688 ZNF585AQ6P3V2 769 aa7.19□□□□□ -1.26
SNHG1-224ENST00000545688 LRSAM1Q6UWE0 723 aa7.19□□□□□ -1.26
SNHG1-224ENST00000545688 LMF1Q96S06 567 aa7.19□□□□□ -1.26
SNHG1-224ENST00000545688 KLC2Q9H0B6 622 aa7.19□□□□□ -1.26
SNHG1-224ENST00000545688 KCNH7Q9NS40 1196 aa7.19□□□□□ -1.26
SNHG1-224ENST00000545688 MATN3O15232 486 aa7.18□□□□□ -1.26
SNHG1-224ENST00000545688 TNFRSF1AP19438 455 aa7.18□□□□□ -1.26
SNHG1-224ENST00000545688 STILQ15468 1287 aa7.18□□□□□ -1.26
SNHG1-224ENST00000545688 IGSF22Q8N9C0 903 aa7.18□□□□□ -1.26
SNHG1-224ENST00000545688 ASB15Q8WXK1 588 aa7.18□□□□□ -1.26
SNHG1-224ENST00000545688 WNK4Q96J92 1243 aa7.18□□□□□ -1.26
SNHG1-224ENST00000545688 WWC2-AS2Q96NR7 200 aa7.18□□□□□ -1.26
SNHG1-224ENST00000545688 ZDHHC5Q9C0B5 715 aa7.18□□□□□ -1.26
SNHG1-224ENST00000545688 B3GALT1Q9Y5Z6 326 aa7.18□□□□□ -1.26
SNHG1-224ENST00000545688 SLC12A8A0AV02 714 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 RASSF10A6NK89 507 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 ZNF623O75123 536 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 RAPGEF3O95398 923 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 ECE1P42892 770 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 KCNQ1P51787 676 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 ZNF568Q3ZCX4 644 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 TMEM177Q53S58 311 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 CXXC5Q7LFL8 322 aaKnown RBP7.17□□□□□ -1.26
SNHG1-224ENST00000545688 Q8TCH9 128 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 DLG3Q92796 817 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 NEIL1Q96FI4 390 aaPredicted RBP7.17□□□□□ -1.26
SNHG1-224ENST00000545688 GBP4Q96PP9 640 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 BTBD2Q9BX70 525 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 DEF6Q9H4E7 631 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 TSC22D4Q9Y3Q8 395 aa7.17□□□□□ -1.26
SNHG1-224ENST00000545688 PLD2O14939 933 aa7.16□□□□□ -1.26
SNHG1-224ENST00000545688 FOXP2O15409 715 aa7.16□□□□□ -1.26
SNHG1-224ENST00000545688 HMGCRP04035 888 aa7.16□□□□□ -1.26
SNHG1-224ENST00000545688 NOLC1Q14978 699 aaKnown RBP eCLIP7.16□□□□□ -1.261e-323■■■■■ 29.1
SNHG1-224ENST00000545688 TMEM132BQ14DG7 1078 aa7.16□□□□□ -1.26
SNHG1-224ENST00000545688 NFE2L2Q16236 605 aa7.16□□□□□ -1.26
SNHG1-224ENST00000545688 RNF151Q2KHN1 245 aa7.16□□□□□ -1.26
SNHG1-224ENST00000545688 ZMAT1Q5H9K5 638 aa7.16□□□□□ -1.26
SNHG1-224ENST00000545688 KANK2Q63ZY3 851 aa7.16□□□□□ -1.26
SNHG1-224ENST00000545688 TCTN3Q6NUS6 607 aa7.16□□□□□ -1.26
SNHG1-224ENST00000545688 PALM2Q8IXS6 379 aa7.16□□□□□ -1.26
SNHG1-224ENST00000545688 C2orf69Q8N8R5 385 aa7.16□□□□□ -1.26
SNHG1-224ENST00000545688 KIAA1683Q9H0B3 1180 aa7.16□□□□□ -1.26
SNHG1-224ENST00000545688 FBXO10Q9UK96 956 aa7.16□□□□□ -1.26
SNHG1-224ENST00000545688 PRAMEF22A3QJZ6 481 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 FOXS1O43638 330 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 NPTXRO95502 500 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 SELENOPP49908 381 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 IRF9Q00978 393 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 CD83Q01151 205 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 SQSTM1Q13501 440 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 LARP4Q71RC2 724 aaKnown RBP eCLIP7.15□□□□□ -1.26
SNHG1-224ENST00000545688 SPRED1Q7Z699 444 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 GIMAP8Q8ND71 665 aaPredicted RBP7.15□□□□□ -1.26
SNHG1-224ENST00000545688 HIPK4Q8NE63 616 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 SH3RF3Q8TEJ3 882 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms