RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 TBCELQ5QJ74 424 aa8.87□□□□□ -0.99
SNHG1-223ENST00000545440 SGMS1Q86VZ5 419 aa8.87□□□□□ -0.99
SNHG1-223ENST00000545440 SLC43A3Q8NBI5 491 aa8.87□□□□□ -0.99
SNHG1-223ENST00000545440 OR6J1Q8NGC5 347 aa8.87□□□□□ -0.99
SNHG1-223ENST00000545440 BADQ92934 168 aa8.87□□□□□ -0.99
SNHG1-223ENST00000545440 TRIM43Q96BQ3 446 aaPredicted RBP8.87□□□□□ -0.99
SNHG1-223ENST00000545440 PIGSQ96S52 555 aa8.87□□□□□ -0.99
SNHG1-223ENST00000545440 NEUROD4Q9HD90 331 aa8.87□□□□□ -0.99
SNHG1-223ENST00000545440 PXMP2Q9NR77 195 aa8.87□□□□□ -0.99
SNHG1-223ENST00000545440 LOXHD1Q8IVV2 1947 aa8.87□□□□□ -0.99
SNHG1-223ENST00000545440 MICAL3Q7RTP6 2002 aa8.87□□□□□ -0.99
SNHG1-223ENST00000545440 FRMPD4Q14CM0 1322 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 TLR3O15455 904 aaKnown RBP8.86□□□□□ -0.99
SNHG1-223ENST00000545440 AVPP01185 164 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 CD4P01730 458 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 RAG1P15918 1043 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 EIF2AK2P19525 551 aaKnown RBP8.86□□□□□ -0.99
SNHG1-223ENST00000545440 ITGB8P26012 769 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 NOS2P35228 1153 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 PURAQ00577 322 aaKnown RBP8.86□□□□□ -0.99
SNHG1-223ENST00000545440 ITGA7Q13683 1181 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 COL9A3Q14050 684 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-223ENST00000545440 KRT32Q14532 448 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 STXBP2Q15833 593 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 BRDTQ58F21 947 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-223ENST00000545440 TMEM63BQ5T3F8 832 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 ARHGEF16Q5VV41 709 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 C16orf46Q6P387 395 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 CCDC62Q6P9F0 684 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 NFXL1Q6ZNB6 911 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 TBC1D5Q92609 795 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 RRP36Q96EU6 259 aaKnown RBP8.86□□□□□ -0.99
SNHG1-223ENST00000545440 NEK1Q96PY6 1258 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 TAAR1Q96RJ0 339 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 MYL10Q9BUA6 226 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 C2orf49Q9BVC5 232 aaPredicted RBP8.86□□□□□ -0.99
SNHG1-223ENST00000545440 TMEM39AQ9NV64 488 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 SEC63Q9UGP8 760 aaKnown RBP8.86□□□□□ -0.99
SNHG1-223ENST00000545440 SLC12A7Q9Y666 1083 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 SIP14410 1827 aa8.86□□□□□ -0.99
SNHG1-223ENST00000545440 GRIN2DO15399 1336 aa8.85□□□□□ -0.99
SNHG1-223ENST00000545440 GCOM1H8Y6P7 765 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-223ENST00000545440 KPNA6O60684 536 aa8.85□□□□□ -0.99
SNHG1-223ENST00000545440 EIF3JO75822 258 aaKnown RBP8.85□□□□□ -0.99
SNHG1-223ENST00000545440 FAM13AO94988 1023 aa8.85□□□□□ -0.99
SNHG1-223ENST00000545440 ARIH2O95376 493 aa8.85□□□□□ -0.99
SNHG1-223ENST00000545440 TIMP1P01033 207 aa8.85□□□□□ -0.99
SNHG1-223ENST00000545440 HMGB1P09429 215 aaKnown RBP8.85□□□□□ -0.99
SNHG1-223ENST00000545440 POLR2MP0CAP2 368 aa8.85□□□□□ -0.99
SNHG1-223ENST00000545440 TXNP10599 105 aaKnown RBP8.85□□□□□ -0.99
SNHG1-223ENST00000545440 FPGSQ05932 587 aa8.85□□□□□ -0.99
SNHG1-223ENST00000545440 NAA30Q147X3 362 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-223ENST00000545440 PGM5Q15124 567 aa8.85□□□□□ -0.99
SNHG1-223ENST00000545440 LYSMD3Q7Z3D4 306 aa8.85□□□□□ -0.99
SNHG1-223ENST00000545440 MICU3Q86XE3 530 aa8.85□□□□□ -0.99
SNHG1-223ENST00000545440 KDF1Q8NAX2 398 aaPredicted RBP8.85□□□□□ -0.99
SNHG1-223ENST00000545440 PDCD2LQ9BRP1 358 aa8.85□□□□□ -0.99
SNHG1-223ENST00000545440 HRH3Q9Y5N1 445 aa8.85□□□□□ -0.99
SNHG1-223ENST00000545440 CNTNAP5Q8WYK1 1306 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 SOWAHDA6NJG2 315 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 TTLL8A6PVC2 850 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 H3BRB1 525 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 EPB41L2O43491 1005 aaKnown RBP8.84□□□□□ -0.99
SNHG1-223ENST00000545440 STAM2O75886 525 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 REC8O95072 547 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 PLEKHA8P1O95397 391 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 GH1P01241 217 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 HOXA13P31271 388 aaPredicted RBP8.84□□□□□ -0.99
SNHG1-223ENST00000545440 HSPA4P34932 840 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 SERPINB4P48594 390 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 SMCPP49901 116 aaPredicted RBP8.84□□□□□ -0.99
SNHG1-223ENST00000545440 RCAN1P53805 252 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 PSMC6P62333 389 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 ARHGAP1Q07960 439 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 ERICH6BQ5W0A0 696 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 MFSD5Q6N075 450 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 KCNV1Q6PIU1 500 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 APOA5Q6Q788 366 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 SEPT14Q6ZU15 432 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 TMTC3Q6ZXV5 915 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 DHX32Q7L7V1 743 aaKnown RBP8.84□□□□□ -0.99
SNHG1-223ENST00000545440 KCNB2Q92953 911 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 MTG1Q9BT17 334 aaPredicted RBP8.84□□□□□ -0.99
SNHG1-223ENST00000545440 LRRC2Q9BYS8 371 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 GRIP2Q9C0E4 1043 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 TUT1Q9H6E5 874 aaKnown RBP8.84□□□□□ -0.99
SNHG1-223ENST00000545440 RBM28Q9NW13 759 aaKnown RBP8.84□□□□□ -0.99
SNHG1-223ENST00000545440 DDX41Q9UJV9 622 aaKnown RBP8.84□□□□□ -0.99
SNHG1-223ENST00000545440 MRVI1Q9Y6F6 885 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 LAMA2P24043 3122 aaKnown RBP8.84□□□□□ -0.99
SNHG1-223ENST00000545440 NID2Q14112 1375 aa8.84□□□□□ -0.99
SNHG1-223ENST00000545440 B4GALT4O60513 344 aa8.83□□□□□ -1
SNHG1-223ENST00000545440 MMP3P08254 477 aa8.83□□□□□ -1
SNHG1-223ENST00000545440 MYL3P08590 195 aa8.83□□□□□ -1
SNHG1-223ENST00000545440 TGFB3P10600 412 aa8.83□□□□□ -1
SNHG1-223ENST00000545440 RXRAP19793 462 aa8.83□□□□□ -1
SNHG1-223ENST00000545440 CCND2P30279 289 aa8.83□□□□□ -1
SNHG1-223ENST00000545440 PLA2G4AP47712 749 aa8.83□□□□□ -1
SNHG1-223ENST00000545440 EXOSC10Q01780 885 aaKnown RBP8.83□□□□□ -1
SNHG1-223ENST00000545440 PTPN11Q06124 597 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms