RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 SEPT8Q92599 483 aa14.17□□□□□ -0.14
ACTN1-206ENST00000544964 TOP1MTQ969P6 601 aa14.17□□□□□ -0.14
ACTN1-206ENST00000544964 ZMYND12Q9H0C1 365 aa14.17□□□□□ -0.14
ACTN1-206ENST00000544964 TSHZ2Q9NRE2 1034 aa14.17□□□□□ -0.14
ACTN1-206ENST00000544964 NRCAMQ92823 1304 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 GSTTP1A0A1W2PQM5 241 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 CHRNA1P02708 482 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 HSP90AA1P07900 732 aaKnown RBP14.16□□□□□ -0.14
ACTN1-206ENST00000544964 XBP1P17861 261 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 MTMR1Q13613 665 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 TRIM29Q14134 588 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 BECN1Q14457 450 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 JAKMIP3Q5VZ66 844 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 RPAINQ86UA6 219 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 GIMAP8Q8ND71 665 aaPredicted RBP14.16□□□□□ -0.14
ACTN1-206ENST00000544964 FBXO22Q8NEZ5 403 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 INTS4Q96HW7 963 aaKnown RBP14.16□□□□□ -0.14
ACTN1-206ENST00000544964 PGBD1Q96JS3 809 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 C8orf76Q96K31 380 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 PHF20Q9BVI0 1012 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 IFIH1Q9BYX4 1025 aaKnown RBP14.16□□□□□ -0.14
ACTN1-206ENST00000544964 RAPGEFL1Q9UHV5 662 aa14.16□□□□□ -0.14
ACTN1-206ENST00000544964 MBLAC1A4D2B0 266 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-206ENST00000544964 LINC00271P0C7V0 271 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 MARK3P27448 753 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 GNA11P29992 359 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 PPFIA1Q13136 1202 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 NPY5RQ15761 445 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 EPC2Q52LR7 807 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 MARCH8Q5T0T0 291 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 TAF2Q6P1X5 1199 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 APBB2Q92870 758 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 CDHR1Q96JP9 859 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 YME1L1Q96TA2 773 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 PCYT2Q99447 389 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 UBE2ZQ9H832 354 aaPredicted RBP14.15□□□□□ -0.14
ACTN1-206ENST00000544964 EHMT1Q9H9B1 1298 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 RC3H2Q9HBD1 1191 aaKnown RBP14.15□□□□□ -0.14
ACTN1-206ENST00000544964 JADE2Q9NQC1 790 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 PKD2L1Q9P0L9 805 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 TUBE1Q9UJT0 475 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 PCDHA6Q9UN73 950 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 PCDHA4Q9UN74 947 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 PCDHA8Q9Y5H6 950 aa14.15□□□□□ -0.14
ACTN1-206ENST00000544964 C5orf42Q9H799 3197 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 SPDYE3A6NKU9 549 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 MMP1P03956 469 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 GHRP10912 638 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 CLK2P49760 499 aaKnown RBP14.14□□□□□ -0.15
ACTN1-206ENST00000544964 LPIN1Q14693 890 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 GRIK4Q16099 956 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 BLIDQ8IZY5 108 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 REXO1Q8N1G1 1221 aaKnown RBP14.14□□□□□ -0.15
ACTN1-206ENST00000544964 BICD2Q8TD16 824 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 OXER1Q8TDS5 423 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 SEPT1Q8WYJ6 367 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 KHSRPQ92945 711 aaKnown RBP eCLIP14.14□□□□□ -0.15
ACTN1-206ENST00000544964 ZBTB10Q96DT7 871 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 MRPL38Q96DV4 380 aaKnown RBP14.14□□□□□ -0.15
ACTN1-206ENST00000544964 GLT8D2Q9H1C3 349 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 ERAP1Q9NZ08 941 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 KIF3AQ9Y496 699 aa14.14□□□□□ -0.15
ACTN1-206ENST00000544964 WDR81Q562E7 1941 aa14.13□□□□□ -0.15
ACTN1-206ENST00000544964 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.13□□□□□ -0.15
ACTN1-206ENST00000544964 UPP2O95045 317 aa14.13□□□□□ -0.15
ACTN1-206ENST00000544964 LARP1BQ659C4 914 aaKnown RBP14.13□□□□□ -0.15
ACTN1-206ENST00000544964 GALNT17Q6IS24 598 aa14.13□□□□□ -0.15
ACTN1-206ENST00000544964 FAM177A1Q8N128 213 aaPredicted RBP14.13□□□□□ -0.15
ACTN1-206ENST00000544964 DAGLBQ8NCG7 672 aa14.13□□□□□ -0.15
ACTN1-206ENST00000544964 FBXO18Q8NFZ0 1043 aa14.13□□□□□ -0.15
ACTN1-206ENST00000544964 CYP2W1Q8TAV3 490 aa14.13□□□□□ -0.15
ACTN1-206ENST00000544964 SAMD11Q96NU1 681 aa14.13□□□□□ -0.15
ACTN1-206ENST00000544964 ANO3Q9BYT9 981 aa14.13□□□□□ -0.15
ACTN1-206ENST00000544964 JPH1Q9HDC5 661 aaPredicted RBP14.13□□□□□ -0.15
ACTN1-206ENST00000544964 KCNH7Q9NS40 1196 aa14.13□□□□□ -0.15
ACTN1-206ENST00000544964 MUC6Q6W4X9 2439 aa14.13□□□□□ -0.15
ACTN1-206ENST00000544964 H3BNC9 293 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 KRT2P35908 639 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 ANP32AP39687 249 aaKnown RBP14.12□□□□□ -0.15
ACTN1-206ENST00000544964 NR5A1Q13285 461 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 ITGB3BPQ13352 177 aaPredicted RBP14.12□□□□□ -0.15
ACTN1-206ENST00000544964 AP3B2Q13367 1082 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 COL19A1Q14993 1142 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 LEXMQ3ZCV2 418 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 FBXO47Q5MNV8 452 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 DIS3L2Q8IYB7 885 aaKnown RBP14.12□□□□□ -0.15
ACTN1-206ENST00000544964 DNAJB3Q8WWF6 145 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 LINC01599Q8WXQ3 324 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 GLG1Q92896 1179 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 MXRA8Q9BRK3 442 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 SMARCAD1Q9H4L7 1026 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 CD320Q9NPF0 282 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 RBM19Q9Y4C8 960 aaKnown RBP14.12□□□□□ -0.15
ACTN1-206ENST00000544964 NFASCO94856 1347 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 ADGRA3Q8IWK6 1321 aa14.12□□□□□ -0.15
ACTN1-206ENST00000544964 BTBD18B2RXH4 712 aa14.11□□□□□ -0.15
ACTN1-206ENST00000544964 H3BQV1 296 aa14.11□□□□□ -0.15
ACTN1-206ENST00000544964 M0R2N6 131 aa14.11□□□□□ -0.15
ACTN1-206ENST00000544964 MAFGO15525 162 aa14.11□□□□□ -0.15
ACTN1-206ENST00000544964 FOSP01100 380 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms