RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 QRICH1Q2TAL8 776 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 TRAF7Q6Q0C0 670 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 SEPT14Q6ZU15 432 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 TMCO2Q7Z6W1 182 aaPredicted RBP7.48□□□□□ -1.21
CDCA3-209ENST00000544610 MCF2L2Q86YR7 1114 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 ADGRF4Q8IZF3 695 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 TMEM87AQ8NBN3 555 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 PPTC7Q8NI37 304 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 TBC1D5Q92609 795 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 FAM122AQ96E09 287 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 TAAR1Q96RJ0 339 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 RMDN3Q96TC7 470 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 MYL10Q9BUA6 226 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 PHF20Q9BVI0 1012 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 KATNAL1Q9BW62 490 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 SCAND2PQ9GZW5 306 aaPredicted RBP7.48□□□□□ -1.21
CDCA3-209ENST00000544610 UBA5Q9GZZ9 404 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 LMCD1Q9NZU5 365 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 DDX41Q9UJV9 622 aaKnown RBP7.48□□□□□ -1.21
CDCA3-209ENST00000544610 ZDHHC9Q9Y397 364 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 V9GY48 417 aaPredicted RBP7.48□□□□□ -1.21
CDCA3-209ENST00000544610 BDP1A6H8Y1 2624 aa7.48□□□□□ -1.21
CDCA3-209ENST00000544610 ABHD14A-ACY1A0A1B0GW23 586 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 LINC01553A4QN01 128 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 OPLAHO14841 1288 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 EFCAB14O75071 495 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 EIF3JO75822 258 aaKnown RBP7.47□□□□□ -1.21
CDCA3-209ENST00000544610 PLEKHA8P1O95397 391 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 HOXD8P13378 290 aaPredicted RBP7.47□□□□□ -1.21
CDCA3-209ENST00000544610 EIF2AK2P19525 551 aaKnown RBP7.47□□□□□ -1.21
CDCA3-209ENST00000544610 PSEN2P49810 448 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 HSD17B4P51659 736 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 ERVK-21P61565 698 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 PTK7Q13308 1070 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 LAMC2Q13753 1193 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 TRIM71Q2Q1W2 868 aaKnown RBP7.47□□□□□ -1.21
CDCA3-209ENST00000544610 RILPL1Q5EBL4 403 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 ARHGEF16Q5VV41 709 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 FBXO11Q86XK2 927 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 NOSTRINQ8IVI9 506 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 STAG2Q8N3U4 1231 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 C7orf31Q8N865 590 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 GDPD5Q8WTR4 605 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 TNPO1Q92973 898 aaKnown RBP7.47□□□□□ -1.21
CDCA3-209ENST00000544610 WNT8BQ93098 351 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 PHKBQ93100 1093 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 ZNF396Q96N95 335 aaPredicted RBP7.47□□□□□ -1.21
CDCA3-209ENST00000544610 PHOX2BQ99453 314 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 RAD9AQ99638 391 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 ZBED2Q9BTP6 218 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 AMNQ9BXJ7 453 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 EPHX3Q9H6B9 360 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 JMJD4Q9H9V9 463 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 SUGCTQ9HAC7 445 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 PXMP2Q9NR77 195 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 HDAC6Q9UBN7 1215 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 MRPL11Q9Y3B7 192 aaKnown RBP7.47□□□□□ -1.21
CDCA3-209ENST00000544610 MRVI1Q9Y6F6 885 aa7.47□□□□□ -1.21
CDCA3-209ENST00000544610 BAZ2BQ9UIF8 2168 aaKnown RBP7.47□□□□□ -1.21
CDCA3-209ENST00000544610 M0R2N6 131 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 STXBP3O00186 592 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 PIK3CDO00329 1044 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 YEATS4O95619 227 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 FOSP01100 380 aaPredicted RBP7.46□□□□□ -1.22
CDCA3-209ENST00000544610 NR3C2P08235 984 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 ZNF286BP0CG31 522 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 RXRAP19793 462 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 CLK2P49760 499 aaKnown RBP7.46□□□□□ -1.22
CDCA3-209ENST00000544610 KRT85P78386 507 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 RESTQ13127 1097 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 IKBKEQ14164 716 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 MBTPS1Q14703 1052 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 KIAA0753Q2KHM9 967 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 SKOR2Q2VWA4 1001 aaPredicted RBP7.46□□□□□ -1.22
CDCA3-209ENST00000544610 ZNF618Q5T7W0 954 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 KHSRPQ92945 711 aaKnown RBP eCLIP7.46□□□□□ -1.22
CDCA3-209ENST00000544610 TGS1Q96RS0 853 aaKnown RBP7.46□□□□□ -1.22
CDCA3-209ENST00000544610 NAP1L4Q99733 375 aaKnown RBP7.46□□□□□ -1.22
CDCA3-209ENST00000544610 EPAS1Q99814 870 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 LRFN3Q9BTN0 628 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 ANP32EQ9BTT0 268 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 C6orf50Q9HD87 102 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 NPDC1Q9NQX5 325 aaPredicted RBP7.46□□□□□ -1.22
CDCA3-209ENST00000544610 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.46□□□□□ -1.22
CDCA3-209ENST00000544610 PCDHA4Q9UN74 947 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 COL4A6Q14031 1691 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 EMSYQ7Z589 1322 aa7.46□□□□□ -1.22
CDCA3-209ENST00000544610 KIAA1217Q5T5P2 1943 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.45□□□□□ -1.22
CDCA3-209ENST00000544610 VPS37CA5D8V6 355 aaPredicted RBP7.45□□□□□ -1.22
CDCA3-209ENST00000544610 LAD1O00515 517 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 GPR37L1O60883 481 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 PPP1R11O60927 126 aaPredicted RBP7.45□□□□□ -1.22
CDCA3-209ENST00000544610 PPFIA4O75335 1185 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 LGR5O75473 907 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 BAG4O95429 457 aaKnown RBP7.45□□□□□ -1.22
CDCA3-209ENST00000544610 CFBP00751 764 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 HOXC8P31273 242 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 MCM4P33991 863 aa7.45□□□□□ -1.22
CDCA3-209ENST00000544610 KRT2P35908 639 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms