RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 RRN3P2A6NIE6 340 aa17.77■□□□□ 0.44
CD4-212ENST00000544344 E7EWF7 191 aa17.77■□□□□ 0.44
CD4-212ENST00000544344 PER2O15055 1255 aa17.77■□□□□ 0.44
CD4-212ENST00000544344 ST18O60284 1047 aa17.77■□□□□ 0.44
CD4-212ENST00000544344 RPLP2P05387 115 aaKnown RBP17.77■□□□□ 0.44
CD4-212ENST00000544344 STAG3L1P0CL83 205 aa17.77■□□□□ 0.44
CD4-212ENST00000544344 SMARCA1P28370 1054 aa17.77■□□□□ 0.44
CD4-212ENST00000544344 SIGLEC14Q08ET2 396 aa17.77■□□□□ 0.44
CD4-212ENST00000544344 MTMR1Q13613 665 aa17.77■□□□□ 0.44
CD4-212ENST00000544344 SUGP1Q8IWZ8 645 aaKnown RBP17.77■□□□□ 0.44
CD4-212ENST00000544344 TRAPPC12Q8WVT3 735 aa17.77■□□□□ 0.44
CD4-212ENST00000544344 RRP36Q96EU6 259 aaKnown RBP17.77■□□□□ 0.44
CD4-212ENST00000544344 MAP3K14Q99558 947 aa17.77■□□□□ 0.44
CD4-212ENST00000544344 MYL10Q9BUA6 226 aa17.77■□□□□ 0.44
CD4-212ENST00000544344 CELF4Q9BZC1 486 aaKnown RBP17.77■□□□□ 0.44
CD4-212ENST00000544344 PCDHA2Q9Y5H9 948 aa17.77■□□□□ 0.44
CD4-212ENST00000544344 KDM3AQ9Y4C1 1321 aa17.76■□□□□ 0.43
CD4-212ENST00000544344 PPFIA3O75145 1194 aa17.76■□□□□ 0.43
CD4-212ENST00000544344 ATF7P17544 494 aaPredicted RBP17.76■□□□□ 0.43
CD4-212ENST00000544344 PAK2Q13177 524 aa17.76■□□□□ 0.43
CD4-212ENST00000544344 KCNC3Q14003 757 aa17.76■□□□□ 0.43
CD4-212ENST00000544344 MB21D2Q8IYB1 491 aaPredicted RBP17.76■□□□□ 0.43
CD4-212ENST00000544344 NCOA7Q8NI08 942 aa17.76■□□□□ 0.43
CD4-212ENST00000544344 RPGRIP1Q96KN7 1286 aa17.76■□□□□ 0.43
CD4-212ENST00000544344 TLE6Q9H808 572 aa17.76■□□□□ 0.43
CD4-212ENST00000544344 PSTPIP2Q9H939 334 aa17.76■□□□□ 0.43
CD4-212ENST00000544344 JADE2Q9NQC1 790 aa17.76■□□□□ 0.43
CD4-212ENST00000544344 MGEA5O60502 916 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 PLEKHA8P1O95397 391 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 GSPT1P15170 499 aaKnown RBP17.75■□□□□ 0.43
CD4-212ENST00000544344 ERVFC1P60507 584 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 UBE3AQ05086 875 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 AAMPQ13685 434 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 SART3Q15020 963 aaKnown RBP17.75■□□□□ 0.43
CD4-212ENST00000544344 PLCB4Q15147 1175 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 UBE2SQ16763 222 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 DUSP6Q16828 381 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 TMEM266Q2M3C6 531 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 RALYLQ86SE5 291 aaKnown RBP17.75■□□□□ 0.43
CD4-212ENST00000544344 ZNF654Q8IZM8 581 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 SRBD1Q8N5C6 995 aaKnown RBP17.75■□□□□ 0.43
CD4-212ENST00000544344 LY9Q9HBG7 655 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 FAM86C1Q9NVL1 165 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 HCSTQ9UBK5 93 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 PLXNA3P51805 1871 aa17.75■□□□□ 0.43
CD4-212ENST00000544344 SMIM35A0A1B0GVV1 85 aa17.74■□□□□ 0.43
CD4-212ENST00000544344 FSCN2O14926 492 aa17.74■□□□□ 0.43
CD4-212ENST00000544344 MAFGO15525 162 aa17.74■□□□□ 0.43
CD4-212ENST00000544344 DDAH1O94760 285 aa17.74■□□□□ 0.43
CD4-212ENST00000544344 AVPR2P30518 371 aa17.74■□□□□ 0.43
CD4-212ENST00000544344 SARSP49591 514 aaKnown RBP17.74■□□□□ 0.43
CD4-212ENST00000544344 CMTR1Q8N1G2 835 aaKnown RBP17.74■□□□□ 0.43
CD4-212ENST00000544344 S1PR5Q9H228 398 aa17.74■□□□□ 0.43
CD4-212ENST00000544344 ERVK-5Q9HDB9 667 aa17.74■□□□□ 0.43
CD4-212ENST00000544344 JPH1Q9HDC5 661 aaPredicted RBP17.74■□□□□ 0.43
CD4-212ENST00000544344 TLR9Q9NR96 1032 aa17.74■□□□□ 0.43
CD4-212ENST00000544344 TRPC6Q9Y210 931 aa17.74■□□□□ 0.43
CD4-212ENST00000544344 M0QZ92 97 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 FGF18O76093 207 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 KRT76Q01546 638 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 COL9A3Q14050 684 aaPredicted RBP17.73■□□□□ 0.43
CD4-212ENST00000544344 PTPN21Q16825 1174 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 FAM102BQ5T8I3 360 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 MTHFD1LQ6UB35 978 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 TMEM184AQ6ZMB5 413 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 PLPPR4Q7Z2D5 763 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 CTCFLQ8NI51 663 aaPredicted RBP17.73■□□□□ 0.43
CD4-212ENST00000544344 CYP2W1Q8TAV3 490 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 MICAL1Q8TDZ2 1067 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 TMEM40Q8WWA1 233 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 CDHR5Q9HBB8 845 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 KCNH7Q9NS40 1196 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 SLC9A2Q9UBY0 812 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 SEC63Q9UGP8 760 aaKnown RBP17.73■□□□□ 0.43
CD4-212ENST00000544344 LRFN2Q9ULH4 789 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 PCDHA6Q9UN73 950 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 PCDHA8Q9Y5H6 950 aa17.73■□□□□ 0.43
CD4-212ENST00000544344 SPTBN4Q9H254 2564 aa17.72■□□□□ 0.43
CD4-212ENST00000544344 GFRA3O60609 400 aa17.72■□□□□ 0.43
CD4-212ENST00000544344 PDE4AP27815 886 aa17.72■□□□□ 0.43
CD4-212ENST00000544344 KIF5BP33176 963 aa17.72■□□□□ 0.43
CD4-212ENST00000544344 ACTR2P61160 394 aa17.72■□□□□ 0.43
CD4-212ENST00000544344 SYCE2Q6PIF2 218 aa17.72■□□□□ 0.43
CD4-212ENST00000544344 NME8Q8N427 588 aa17.72■□□□□ 0.43
CD4-212ENST00000544344 CDCA3Q99618 268 aaPredicted RBP17.72■□□□□ 0.43
CD4-212ENST00000544344 LZTS2Q9BRK4 669 aa17.72■□□□□ 0.43
CD4-212ENST00000544344 RGS18Q9NS28 235 aa17.72■□□□□ 0.43
CD4-212ENST00000544344 NOC2LQ9Y3T9 749 aaKnown RBP17.72■□□□□ 0.43
CD4-212ENST00000544344 PCDHB7Q9Y5E2 793 aa17.72■□□□□ 0.43
CD4-212ENST00000544344 PCDHB12Q9Y5F1 795 aa17.72■□□□□ 0.43
CD4-212ENST00000544344 MYO15AQ9UKN7 3530 aa17.72■□□□□ 0.43
CD4-212ENST00000544344 EVPLQ92817 2033 aa17.71■□□□□ 0.43
CD4-212ENST00000544344 hCG_1642624A0A1W2PR95 340 aa17.71■□□□□ 0.43
CD4-212ENST00000544344 TBKBP1A7MCY6 615 aa17.71■□□□□ 0.43
CD4-212ENST00000544344 C9IYK1 514 aa17.71■□□□□ 0.43
CD4-212ENST00000544344 PDGFBP01127 241 aaPredicted RBP17.71■□□□□ 0.43
CD4-212ENST00000544344 CHMLP26374 656 aa17.71■□□□□ 0.43
CD4-212ENST00000544344 STAT5BP51692 787 aa17.71■□□□□ 0.43
CD4-212ENST00000544344 NFX1Q12986 1120 aaKnown RBP17.71■□□□□ 0.43
CD4-212ENST00000544344 ITGB3BPQ13352 177 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms