RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 PHIPQ8WWQ0 1821 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 CCDC42Q96M95 316 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 EIF3CQ99613 913 aaKnown RBP18.8■□□□□ 0.6
PTPRO-209ENST00000543886 POLD4Q9HCU8 107 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 SEL1LQ9UBV2 794 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 C19orf81C9J6K1 198 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 HERVK_113P62684 666 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 MRPS9P82933 396 aaKnown RBP18.8■□□□□ 0.6
PTPRO-209ENST00000543886 PPP2R3AQ06190 1150 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 ARHGAP27Q6ZUM4 889 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 STXBP4Q6ZWJ1 553 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 FRMD5Q7Z6J6 570 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 SLC35F6Q8N357 371 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 RMDN3Q96TC7 470 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 RNF146Q9NTX7 359 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 ODF2LQ9ULJ1 636 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 FZD1Q9UP38 647 aa18.8■□□□□ 0.6
PTPRO-209ENST00000543886 ASTN1O14525 1302 aa18.79■□□□□ 0.6
PTPRO-209ENST00000543886 LRRC53A6NM62 1247 aa18.79■□□□□ 0.6
PTPRO-209ENST00000543886 ABL1P00519 1130 aa18.79■□□□□ 0.6
PTPRO-209ENST00000543886 NR3C1P04150 777 aa18.79■□□□□ 0.6
PTPRO-209ENST00000543886 MYCLP12524 364 aaPredicted RBP18.79■□□□□ 0.6
PTPRO-209ENST00000543886 KCNMA1Q12791 1236 aa18.79■□□□□ 0.6
PTPRO-209ENST00000543886 ERCC6LQ2NKX8 1250 aa18.79■□□□□ 0.6
PTPRO-209ENST00000543886 ARHGEF16Q5VV41 709 aa18.79■□□□□ 0.6
PTPRO-209ENST00000543886 UBXN4Q92575 508 aa18.79■□□□□ 0.6
PTPRO-209ENST00000543886 C12orf42Q96LP6 360 aa18.79■□□□□ 0.6
PTPRO-209ENST00000543886 ARID3AQ99856 593 aa18.79■□□□□ 0.6
PTPRO-209ENST00000543886 LSM14BQ9BX40 385 aaKnown RBP18.79■□□□□ 0.6
PTPRO-209ENST00000543886 ARMCX3Q9UH62 379 aaPredicted RBP18.79■□□□□ 0.6
PTPRO-209ENST00000543886 GUCA1BQ9UMX6 200 aa18.79■□□□□ 0.6
PTPRO-209ENST00000543886 SAMM50Q9Y512 469 aa18.79■□□□□ 0.6
PTPRO-209ENST00000543886 EFCAB8A8MWE9 144 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 P4HBP07237 508 aaKnown RBP18.78■□□□□ 0.6
PTPRO-209ENST00000543886 LMNB1P20700 586 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 ITGB3BPQ13352 177 aaPredicted RBP18.78■□□□□ 0.6
PTPRO-209ENST00000543886 SPA17Q15506 151 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 CCDC122Q5T0U0 273 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 JAKMIP2Q96AA8 810 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 WNK4Q96J92 1243 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 NAPGQ99747 312 aaPredicted RBP18.78■□□□□ 0.6
PTPRO-209ENST00000543886 ZSWIM4Q9H7M6 989 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 PXMP2Q9NR77 195 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 TBC1D22BQ9NU19 505 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 TMOD4Q9NZQ9 345 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 CEP72Q9P209 647 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 UBE4BO95155 1302 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 DICER1Q9UPY3 1922 aaKnown RBP18.78■□□□□ 0.6
PTPRO-209ENST00000543886 DHX15O43143 795 aaKnown RBP18.78■□□□□ 0.6
PTPRO-209ENST00000543886 TADA3O75528 432 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 EPB41P11171 864 aaKnown RBP18.78■□□□□ 0.6
PTPRO-209ENST00000543886 TUBB2AQ13885 445 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 SUPT20HL1Q3ZLR7 823 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 PDXDC1Q6P996 788 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 ZNF662Q6ZS27 426 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 FAM178BQ8IXR5 827 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 EHBP1Q8NDI1 1231 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 BAP1Q92560 729 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 KLRG1Q96E93 195 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 TUBB2BQ9BVA1 445 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 NUCKS1Q9H1E3 243 aaKnown RBP18.78■□□□□ 0.6
PTPRO-209ENST00000543886 DEF6Q9H4E7 631 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 BCAS3Q9H6U6 928 aa18.78■□□□□ 0.6
PTPRO-209ENST00000543886 COL11A1P12107 1806 aaPredicted RBP18.78■□□□□ 0.6
PTPRO-209ENST00000543886 SLC16A3O15427 465 aaKnown RBP18.77■□□□□ 0.6
PTPRO-209ENST00000543886 KRT86O43790 486 aa18.77■□□□□ 0.6
PTPRO-209ENST00000543886 GUCY2CP25092 1073 aa18.77■□□□□ 0.6
PTPRO-209ENST00000543886 NMT1P30419 496 aaKnown RBP18.77■□□□□ 0.6
PTPRO-209ENST00000543886 ZNF131P52739 623 aa18.77■□□□□ 0.6
PTPRO-209ENST00000543886 OAZ1P54368 228 aa18.77■□□□□ 0.6
PTPRO-209ENST00000543886 SNRNP48Q6IEG0 339 aaKnown RBP18.77■□□□□ 0.6
PTPRO-209ENST00000543886 PDCD2LQ9BRP1 358 aa18.77■□□□□ 0.6
PTPRO-209ENST00000543886 METTL14Q9HCE5 456 aaKnown RBP18.77■□□□□ 0.6
PTPRO-209ENST00000543886 TRIM10Q9UDY6 481 aa18.77■□□□□ 0.6
PTPRO-209ENST00000543886 TCEAL9Q9UHQ7 104 aa18.77■□□□□ 0.6
PTPRO-209ENST00000543886 XRCC5P13010 732 aaKnown RBP18.77■□□□□ 0.59
PTPRO-209ENST00000543886 DSG3P32926 999 aa18.77■□□□□ 0.59
PTPRO-209ENST00000543886 KCNH2Q12809 1159 aa18.77■□□□□ 0.59
PTPRO-209ENST00000543886 ODR4Q5SWX8 454 aa18.77■□□□□ 0.59
PTPRO-209ENST00000543886 ARHGAP20Q9P2F6 1191 aa18.77■□□□□ 0.59
PTPRO-209ENST00000543886 RIPK3Q9Y572 518 aa18.77■□□□□ 0.59
PTPRO-209ENST00000543886 PLEKP08567 350 aaPredicted RBP18.76■□□□□ 0.59
PTPRO-209ENST00000543886 KCNA1Q09470 495 aa18.76■□□□□ 0.59
PTPRO-209ENST00000543886 BAATQ14032 418 aaPredicted RBP18.76■□□□□ 0.59
PTPRO-209ENST00000543886 COG2Q14746 738 aa18.76■□□□□ 0.59
PTPRO-209ENST00000543886 NOL9Q5SY16 702 aaKnown RBP18.76■□□□□ 0.59
PTPRO-209ENST00000543886 PADI6Q6TGC4 694 aa18.76■□□□□ 0.59
PTPRO-209ENST00000543886 CRACR2AQ9BSW2 395 aa18.76■□□□□ 0.59
PTPRO-209ENST00000543886 TSGA10Q9BZW7 698 aa18.76■□□□□ 0.59
PTPRO-209ENST00000543886 NLRC4Q9NPP4 1024 aa18.76■□□□□ 0.59
PTPRO-209ENST00000543886 PRDM4Q9UKN5 801 aa18.76■□□□□ 0.59
PTPRO-209ENST00000543886 SSC5DA1L4H1 1573 aa18.76■□□□□ 0.59
PTPRO-209ENST00000543886 RLFQ13129 1914 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 TESPA1A2RU30 521 aaPredicted RBP18.75■□□□□ 0.59
PTPRO-209ENST00000543886 HIP1RO75146 1068 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 AFPP02771 609 aaKnown RBP18.75■□□□□ 0.59
PTPRO-209ENST00000543886 CCND2P30279 289 aa18.75■□□□□ 0.59
PTPRO-209ENST00000543886 EIF4A3P38919 411 aaKnown RBP18.75■□□□□ 0.59
PTPRO-209ENST00000543886 QARSP47897 775 aaKnown RBP18.75■□□□□ 0.59
PTPRO-209ENST00000543886 KIF11P52732 1056 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms